RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
C11orf54-204ENST00000527003 SHROOM4Q9ULL8 1493 aa6.98□□□□□ -1.29
C11orf54-204ENST00000527003 BCAMP50895 628 aa6.97□□□□□ -1.29
C11orf54-204ENST00000527003 KCNC4Q03721 635 aa6.97□□□□□ -1.29
C11orf54-204ENST00000527003 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
C11orf54-204ENST00000527003 AMER1Q5JTC6 1135 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-204ENST00000527003 SCRIBQ14160 1630 aa6.96□□□□□ -1.3
C11orf54-204ENST00000527003 NKX1-1Q15270 411 aaPredicted RBP6.95□□□□□ -1.3
C11orf54-204ENST00000527003 PROX2Q3B8N5 592 aa6.95□□□□□ -1.3
C11orf54-204ENST00000527003 PDE4AP27815 886 aa6.94□□□□□ -1.3
C11orf54-204ENST00000527003 LCE2BO14633 110 aa6.93□□□□□ -1.3
C11orf54-204ENST00000527003 TRAF7Q6Q0C0 670 aa6.93□□□□□ -1.3
C11orf54-204ENST00000527003 ZFRQ96KR1 1074 aaKnown RBP6.93□□□□□ -1.3
C11orf54-204ENST00000527003 WBP1LQ9NX94 342 aa6.93□□□□□ -1.3
C11orf54-204ENST00000527003 NCKAP5LQ9HCH0 1330 aa6.93□□□□□ -1.3
C11orf54-204ENST00000527003 ONECUT3O60422 494 aaPredicted RBP6.92□□□□□ -1.3
C11orf54-204ENST00000527003 COL9A1P20849 921 aa6.92□□□□□ -1.3
C11orf54-204ENST00000527003 FBXW7Q969H0 707 aa6.92□□□□□ -1.3
C11orf54-204ENST00000527003 DNAJC5Q9H3Z4 198 aa6.92□□□□□ -1.3
C11orf54-204ENST00000527003 PCDHGA10Q9Y5H3 936 aa6.92□□□□□ -1.3
C11orf54-204ENST00000527003 GFRA3O60609 400 aa6.91□□□□□ -1.3
C11orf54-204ENST00000527003 MAP3K9P80192 1104 aa6.91□□□□□ -1.3
C11orf54-204ENST00000527003 KIAA1468Q9P260 1216 aa6.91□□□□□ -1.3
C11orf54-204ENST00000527003 TYW1BQ6NUM6 668 aa6.9□□□□□ -1.3
C11orf54-204ENST00000527003 PHF14O94880 888 aa6.89□□□□□ -1.31
C11orf54-204ENST00000527003 DDX27Q96GQ7 796 aaKnown RBP6.89□□□□□ -1.31
C11orf54-204ENST00000527003 TSR3Q9UJK0 312 aaKnown RBP6.88□□□□□ -1.31
C11orf54-204ENST00000527003 NRG2O14511 850 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-204ENST00000527003 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
C11orf54-204ENST00000527003 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-204ENST00000527003 SEPT9Q9UHD8 586 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-204ENST00000527003 BICRAQ9NZM4 1560 aa6.86□□□□□ -1.31
C11orf54-204ENST00000527003 LRCH3Q96II8 777 aa6.86□□□□□ -1.31
C11orf54-204ENST00000527003 LARP6Q9BRS8 491 aaKnown RBP6.86□□□□□ -1.31
C11orf54-204ENST00000527003 HPS5Q9UPZ3 1129 aa6.86□□□□□ -1.31
C11orf54-204ENST00000527003 TRIM6-TRIM34B2RNG4 842 aa6.85□□□□□ -1.31
C11orf54-204ENST00000527003 MFSD10Q14728 455 aa6.85□□□□□ -1.31
C11orf54-204ENST00000527003 GTPBP6O43824 516 aaPredicted RBP6.84□□□□□ -1.31
C11orf54-204ENST00000527003 EMILIN3Q9NT22 766 aa6.84□□□□□ -1.31
C11orf54-204ENST00000527003 UNC13AQ9UPW8 1703 aa6.84□□□□□ -1.31
C11orf54-204ENST00000527003 C6orf132Q5T0Z8 1188 aa6.83□□□□□ -1.32
C11orf54-204ENST00000527003 EPAS1Q99814 870 aa6.83□□□□□ -1.32
C11orf54-204ENST00000527003 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
C11orf54-204ENST00000527003 V9GY48 417 aaPredicted RBP6.83□□□□□ -1.32
C11orf54-204ENST00000527003 TJAP1Q5JTD0 557 aa6.8□□□□□ -1.32
C11orf54-204ENST00000527003 PPP4CP60510 307 aa6.79□□□□□ -1.32
C11orf54-204ENST00000527003 ZNF787Q6DD87 383 aa6.79□□□□□ -1.32
C11orf54-204ENST00000527003 PPP1R18Q6NYC8 613 aa6.77□□□□□ -1.33
C11orf54-204ENST00000527003 PACS2Q86VP3 889 aa6.77□□□□□ -1.33
C11orf54-204ENST00000527003 BBXQ8WY36 941 aaPredicted RBP6.77□□□□□ -1.33
C11orf54-204ENST00000527003 BAZ1AQ9NRL2 1556 aaPredicted RBP6.77□□□□□ -1.33
C11orf54-204ENST00000527003 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
C11orf54-204ENST00000527003 PDZRN3Q9UPQ7 1066 aa6.76□□□□□ -1.33
C11orf54-204ENST00000527003 CECR2Q9BXF3 1484 aa6.75□□□□□ -1.33
C11orf54-204ENST00000527003 MTRQ99707 1265 aa6.75□□□□□ -1.33
C11orf54-204ENST00000527003 ZNF775Q96BV0 537 aaPredicted RBP6.74□□□□□ -1.33
C11orf54-204ENST00000527003 RBM33Q96EV2 1170 aaKnown RBP6.74□□□□□ -1.33
C11orf54-204ENST00000527003 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.74□□□□□ -1.33
C11orf54-204ENST00000527003 TSKSQ9UJT2 592 aa6.74□□□□□ -1.33
C11orf54-204ENST00000527003 RSF1Q96T23 1441 aaPredicted RBP6.74□□□□□ -1.33
C11orf54-204ENST00000527003 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
C11orf54-204ENST00000527003 CAMK2BQ13554 666 aa6.72□□□□□ -1.33
C11orf54-204ENST00000527003 SAMD7Q7Z3H4 446 aa6.72□□□□□ -1.33
C11orf54-204ENST00000527003 DPYSL4O14531 572 aa6.71□□□□□ -1.34
C11orf54-204ENST00000527003 EN1Q05925 392 aaPredicted RBP6.71□□□□□ -1.34
C11orf54-204ENST00000527003 EIF4G1Q04637 1599 aaKnown RBP6.7□□□□□ -1.34
C11orf54-204ENST00000527003 MROH2BQ7Z745 1585 aa6.7□□□□□ -1.34
C11orf54-204ENST00000527003 SMARCA4P51532 1647 aa6.7□□□□□ -1.34
C11orf54-204ENST00000527003 SUPT5HO00267 1087 aaKnown RBP6.7□□□□□ -1.34
C11orf54-204ENST00000527003 GGCXP38435 758 aa6.7□□□□□ -1.34
C11orf54-204ENST00000527003 DDX12PQ92771 950 aa6.7□□□□□ -1.34
C11orf54-204ENST00000527003 MAP3K7O43318 606 aa6.69□□□□□ -1.34
C11orf54-204ENST00000527003 PAXIP1Q6ZW49 1069 aaPredicted RBP6.69□□□□□ -1.34
C11orf54-204ENST00000527003 ZNF516Q92618 1163 aa6.69□□□□□ -1.34
C11orf54-204ENST00000527003 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.69□□□□□ -1.34
C11orf54-204ENST00000527003 NBR1Q14596 966 aa6.68□□□□□ -1.34
C11orf54-204ENST00000527003 TSR1Q2NL82 804 aaKnown RBP6.68□□□□□ -1.34
C11orf54-204ENST00000527003 SPRYD3Q8NCJ5 442 aa6.68□□□□□ -1.34
C11orf54-204ENST00000527003 CDCA7LQ96GN5 454 aa6.68□□□□□ -1.34
C11orf54-204ENST00000527003 CFAP44Q96MT7 982 aa6.68□□□□□ -1.34
C11orf54-204ENST00000527003 SMARCA2P51531 1590 aa6.68□□□□□ -1.34
C11orf54-204ENST00000527003 NCAPD3P42695 1498 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 ATAD2BQ9ULI0 1458 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 PEG3Q9GZU2 1588 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 NBPF26B4DH59 902 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 SMAPO00193 183 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 PRSS12P56730 875 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 CERKQ8TCT0 537 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 TMUB1Q9BVT8 246 aa6.67□□□□□ -1.34
C11orf54-204ENST00000527003 NECTIN2Q92692 538 aa6.66□□□□□ -1.34
C11orf54-204ENST00000527003 APLP1P51693 650 aa6.65□□□□□ -1.34
C11orf54-204ENST00000527003 TATDN2Q93075 761 aa6.65□□□□□ -1.34
C11orf54-204ENST00000527003 HDGFP51858 240 aaKnown RBP6.64□□□□□ -1.35
C11orf54-204ENST00000527003 NKX2-3Q8TAU0 364 aa6.64□□□□□ -1.35
C11orf54-204ENST00000527003 FAM198AQ9UFP1 575 aa6.64□□□□□ -1.35
C11orf54-204ENST00000527003 RNF40O75150 1001 aa6.63□□□□□ -1.35
C11orf54-204ENST00000527003 PDIA6Q15084 440 aa6.63□□□□□ -1.35
C11orf54-204ENST00000527003 PKDCCQ504Y2 493 aa6.63□□□□□ -1.35
C11orf54-204ENST00000527003 PNMA3Q9UL41 463 aa6.63□□□□□ -1.35
C11orf54-204ENST00000527003 BAZ1BQ9UIG0 1483 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms