RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 TOPBP1Q92547 1522 aa6.06□□□□□ -1.44
HIPK3-204ENST00000525975 CARD11Q9BXL7 1154 aa6.06□□□□□ -1.44
HIPK3-204ENST00000525975 RPRD2Q5VT52 1461 aaKnown RBP6.05□□□□□ -1.44
HIPK3-204ENST00000525975 SLC4A2P04920 1241 aa6.05□□□□□ -1.44
HIPK3-204ENST00000525975 URB2Q14146 1524 aaKnown RBP6.05□□□□□ -1.44
HIPK3-204ENST00000525975 PLEKHG5O94827 1062 aa6.05□□□□□ -1.44
HIPK3-204ENST00000525975 C20orf194Q5TEA3 1177 aa6.05□□□□□ -1.44
HIPK3-204ENST00000525975 MYH16Q9H6N6 1097 aa6.05□□□□□ -1.44
HIPK3-204ENST00000525975 XRCC6P12956 609 aaKnown RBP eCLIP6.05□□□□□ -1.442e-6■■■□□ 18.8
HIPK3-204ENST00000525975 EFCAB5A4FU69 1503 aa6.04□□□□□ -1.44
HIPK3-204ENST00000525975 PANK2Q9BZ23 570 aa6.04□□□□□ -1.44
HIPK3-204ENST00000525975 ANKRD30BQ9BXX2 1392 aa6.04□□□□□ -1.44
HIPK3-204ENST00000525975 POLA1P09884 1462 aaPredicted RBP6.04□□□□□ -1.44
HIPK3-204ENST00000525975 KDM2BQ8NHM5 1336 aa6.04□□□□□ -1.44
HIPK3-204ENST00000525975 HOMEZQ8IX15 550 aa6.04□□□□□ -1.44
HIPK3-204ENST00000525975 DNAJC5Q9H3Z4 198 aa6.04□□□□□ -1.44
HIPK3-204ENST00000525975 TEX14Q8IWB6 1497 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 SPRYD3Q8NCJ5 442 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 POLR1AO95602 1720 aaPredicted RBP6.03□□□□□ -1.44
HIPK3-204ENST00000525975 RAD54L2Q9Y4B4 1467 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 A0A0U1RQG5 324 aaPredicted RBP6.03□□□□□ -1.44
HIPK3-204ENST00000525975 ESPNB1AK53 854 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 MRE11P49959 708 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 DENND4BO75064 1496 aaPredicted RBP6.03□□□□□ -1.44
HIPK3-204ENST00000525975 TPM2P07951 284 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 FBLN2P98095 1184 aa6.03□□□□□ -1.44
HIPK3-204ENST00000525975 SUPT6HQ7KZ85 1726 aaKnown RBP6.03□□□□□ -1.44
HIPK3-204ENST00000525975 CC2D1BQ5T0F9 858 aaKnown RBP6.02□□□□□ -1.45
HIPK3-204ENST00000525975 CANXP27824 592 aaKnown RBP6.02□□□□□ -1.45
HIPK3-204ENST00000525975 ABCA10Q8WWZ4 1543 aa6.02□□□□□ -1.45
HIPK3-204ENST00000525975 ST20-MTHFSA0A0A6YYL1 179 aa6.02□□□□□ -1.45
HIPK3-204ENST00000525975 ARID3CA6NKF2 412 aa6.02□□□□□ -1.45
HIPK3-204ENST00000525975 PDCL3Q9H2J4 239 aa6.02□□□□□ -1.45
HIPK3-204ENST00000525975 EHBP1L1Q8N3D4 1523 aa6.01□□□□□ -1.45
HIPK3-204ENST00000525975 WDR43Q15061 677 aaKnown RBP eCLIP6.01□□□□□ -1.45
HIPK3-204ENST00000525975 ANP32BQ92688 251 aaKnown RBP6.01□□□□□ -1.45
HIPK3-204ENST00000525975 GCC2Q8IWJ2 1684 aa6.01□□□□□ -1.45
HIPK3-204ENST00000525975 MCM4P33991 863 aa6.01□□□□□ -1.45
HIPK3-204ENST00000525975 PDS5BQ9NTI5 1447 aa6.01□□□□□ -1.45
HIPK3-204ENST00000525975 MAPK8IP3Q9UPT6 1336 aa6.01□□□□□ -1.45
HIPK3-204ENST00000525975 TRAK2O60296 914 aa6.01□□□□□ -1.45
HIPK3-204ENST00000525975 TMEM132AQ24JP5 1023 aa6□□□□□ -1.45
HIPK3-204ENST00000525975 GRPEL1Q9HAV7 217 aa6□□□□□ -1.45
HIPK3-204ENST00000525975 KDM6BO15054 1643 aa6□□□□□ -1.45
HIPK3-204ENST00000525975 TARBP1Q13395 1621 aaKnown RBP6□□□□□ -1.45
HIPK3-204ENST00000525975 FSD2A1L4K1 749 aa6□□□□□ -1.45
HIPK3-204ENST00000525975 BCORL1Q5H9F3 1711 aa5.99□□□□□ -1.45
HIPK3-204ENST00000525975 KIAA1211Q6ZU35 1233 aa5.99□□□□□ -1.45
HIPK3-204ENST00000525975 SNAPC4Q5SXM2 1469 aa5.99□□□□□ -1.45
HIPK3-204ENST00000525975 DDX11L8A8MPP1 907 aa5.99□□□□□ -1.45
HIPK3-204ENST00000525975 GOLGA2Q08379 1002 aa5.99□□□□□ -1.45
HIPK3-204ENST00000525975 PKD2Q13563 968 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 CHMP5Q9NZZ3 219 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 PLEKHH2Q8IVE3 1493 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 MSNP26038 577 aaKnown RBP5.98□□□□□ -1.45
HIPK3-204ENST00000525975 CALD1Q05682 793 aaKnown RBP5.98□□□□□ -1.45
HIPK3-204ENST00000525975 TBC1D2Q9BYX2 928 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 UGGT2Q9NYU1 1516 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 CUL7Q14999 1698 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 SEC24BO95487 1268 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 RBM10P98175 930 aaKnown RBP5.98□□□□□ -1.45
HIPK3-204ENST00000525975 ARID3AQ99856 593 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
HIPK3-204ENST00000525975 ISY1Q9ULR0 285 aaKnown RBP5.98□□□□□ -1.45
HIPK3-204ENST00000525975 PARD3Q8TEW0 1356 aa5.97□□□□□ -1.45
HIPK3-204ENST00000525975 ANTXR1Q9H6X2 564 aa5.97□□□□□ -1.45
HIPK3-204ENST00000525975 USP19O94966 1318 aa5.97□□□□□ -1.45
HIPK3-204ENST00000525975 TCOF1Q13428 1488 aaKnown RBP5.97□□□□□ -1.45
HIPK3-204ENST00000525975 HSCBQ8IWL3 235 aa5.97□□□□□ -1.45
HIPK3-204ENST00000525975 EIF3AQ14152 1382 aaKnown RBP5.96□□□□□ -1.45
HIPK3-204ENST00000525975 DUSP27Q5VZP5 1158 aa5.96□□□□□ -1.45
HIPK3-204ENST00000525975 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.96□□□□□ -1.45
HIPK3-204ENST00000525975 PROM2Q8N271 834 aa5.96□□□□□ -1.45
HIPK3-204ENST00000525975 MAP7D2Q96T17 732 aa5.96□□□□□ -1.45
HIPK3-204ENST00000525975 ADAMTS8Q9UP79 889 aa5.96□□□□□ -1.45
HIPK3-204ENST00000525975 PBRM1Q86U86 1689 aa5.96□□□□□ -1.45
HIPK3-204ENST00000525975 ERBB4Q15303 1308 aa5.96□□□□□ -1.45
HIPK3-204ENST00000525975 CENPJQ9HC77 1338 aaPredicted RBP5.96□□□□□ -1.45
HIPK3-204ENST00000525975 MRC2Q9UBG0 1479 aa5.96□□□□□ -1.46
HIPK3-204ENST00000525975 CTTNBP2Q8WZ74 1663 aa5.96□□□□□ -1.46
HIPK3-204ENST00000525975 RNF216Q9NWF9 866 aaPredicted RBP5.96□□□□□ -1.46
HIPK3-204ENST00000525975 KDM5CP41229 1560 aa5.96□□□□□ -1.46
HIPK3-204ENST00000525975 CGNL1Q0VF96 1302 aa5.96□□□□□ -1.46
HIPK3-204ENST00000525975 KIF14Q15058 1648 aa5.96□□□□□ -1.46
HIPK3-204ENST00000525975 THOC2Q8NI27 1593 aaKnown RBP5.95□□□□□ -1.46
HIPK3-204ENST00000525975 TBC1D32Q96NH3 1257 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 WDR62O43379 1518 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 ROCK1Q13464 1354 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 BLMP54132 1417 aaPredicted RBP5.95□□□□□ -1.46
HIPK3-204ENST00000525975 KIAA1107Q9UPP5 1409 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 IGHDP01880 384 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 CLUAP1Q96AJ1 413 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 GBP4Q96PP9 640 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 GRIN2BQ13224 1484 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 ZMYM4Q5VZL5 1548 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 DAPK1P53355 1430 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 RALGAPBQ86X10 1494 aa5.95□□□□□ -1.46
HIPK3-204ENST00000525975 MFAP1P55081 439 aaKnown RBP5.95□□□□□ -1.46
HIPK3-204ENST00000525975 BCAR3O75815 825 aa5.94□□□□□ -1.46
HIPK3-204ENST00000525975 PANK3Q9H999 370 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms