RNA–Protein interactions for RNA: ENST00000524649.1

ARHGAP42-202, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 3

Gene ARHGAP42, Length 489 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-202ENST00000524649 KCNC4Q03721 635 aa10.56□□□□□ -0.72
ARHGAP42-202ENST00000524649 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
ARHGAP42-202ENST00000524649 SOWAHBA6NEL2 793 aa10.55□□□□□ -0.72
ARHGAP42-202ENST00000524649 PDE4AP27815 886 aa10.54□□□□□ -0.72
ARHGAP42-202ENST00000524649 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
ARHGAP42-202ENST00000524649 MFSD10Q14728 455 aa10.53□□□□□ -0.72
ARHGAP42-202ENST00000524649 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
ARHGAP42-202ENST00000524649 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
ARHGAP42-202ENST00000524649 BCAMP50895 628 aa10.49□□□□□ -0.73
ARHGAP42-202ENST00000524649 PAXIP1Q6ZW49 1069 aaPredicted RBP10.48□□□□□ -0.73
ARHGAP42-202ENST00000524649 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
ARHGAP42-202ENST00000524649 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
ARHGAP42-202ENST00000524649 PROX2Q3B8N5 592 aa10.46□□□□□ -0.73
ARHGAP42-202ENST00000524649 TYW1BQ6NUM6 668 aa10.46□□□□□ -0.73
ARHGAP42-202ENST00000524649 TRAF7Q6Q0C0 670 aa10.46□□□□□ -0.73
ARHGAP42-202ENST00000524649 DDX27Q96GQ7 796 aaKnown RBP10.45□□□□□ -0.74
ARHGAP42-202ENST00000524649 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
ARHGAP42-202ENST00000524649 PCDHGA10Q9Y5H3 936 aa10.45□□□□□ -0.74
ARHGAP42-202ENST00000524649 PHF14O94880 888 aa10.44□□□□□ -0.74
ARHGAP42-202ENST00000524649 CFAP44Q96MT7 982 aa10.43□□□□□ -0.74
ARHGAP42-202ENST00000524649 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
ARHGAP42-202ENST00000524649 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
ARHGAP42-202ENST00000524649 GFRA3O60609 400 aa10.42□□□□□ -0.74
ARHGAP42-202ENST00000524649 COL9A1P20849 921 aa10.42□□□□□ -0.74
ARHGAP42-202ENST00000524649 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
ARHGAP42-202ENST00000524649 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
ARHGAP42-202ENST00000524649 NRG2O14511 850 aaPredicted RBP10.4□□□□□ -0.74
ARHGAP42-202ENST00000524649 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
ARHGAP42-202ENST00000524649 LRCH3Q96II8 777 aa10.39□□□□□ -0.75
ARHGAP42-202ENST00000524649 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
ARHGAP42-202ENST00000524649 EPAS1Q99814 870 aa10.38□□□□□ -0.75
ARHGAP42-202ENST00000524649 LCE2BO14633 110 aa10.37□□□□□ -0.75
ARHGAP42-202ENST00000524649 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
ARHGAP42-202ENST00000524649 HPS5Q9UPZ3 1129 aa10.36□□□□□ -0.75
ARHGAP42-202ENST00000524649 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
ARHGAP42-202ENST00000524649 V9GY48 417 aaPredicted RBP10.35□□□□□ -0.75
ARHGAP42-202ENST00000524649 C6orf132Q5T0Z8 1188 aa10.34□□□□□ -0.75
ARHGAP42-202ENST00000524649 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
ARHGAP42-202ENST00000524649 SEPT9Q9UHD8 586 aaPredicted RBP10.33□□□□□ -0.76
ARHGAP42-202ENST00000524649 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
ARHGAP42-202ENST00000524649 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
ARHGAP42-202ENST00000524649 ARIH1Q9Y4X5 557 aaPredicted RBP10.29□□□□□ -0.76
ARHGAP42-202ENST00000524649 PPP4CP60510 307 aa10.28□□□□□ -0.76
ARHGAP42-202ENST00000524649 TJAP1Q5JTD0 557 aa10.27□□□□□ -0.77
ARHGAP42-202ENST00000524649 PACS2Q86VP3 889 aa10.27□□□□□ -0.77
ARHGAP42-202ENST00000524649 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
ARHGAP42-202ENST00000524649 ZNF787Q6DD87 383 aa10.25□□□□□ -0.77
ARHGAP42-202ENST00000524649 E2F4Q16254 413 aa10.22□□□□□ -0.77
ARHGAP42-202ENST00000524649 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
ARHGAP42-202ENST00000524649 DPYSL4O14531 572 aa10.2□□□□□ -0.78
ARHGAP42-202ENST00000524649 PDIA6Q15084 440 aa10.2□□□□□ -0.78
ARHGAP42-202ENST00000524649 MTRQ99707 1265 aa10.2□□□□□ -0.78
ARHGAP42-202ENST00000524649 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.2□□□□□ -0.78
ARHGAP42-202ENST00000524649 PDZRN3Q9UPQ7 1066 aa10.2□□□□□ -0.78
ARHGAP42-202ENST00000524649 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
ARHGAP42-202ENST00000524649 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
ARHGAP42-202ENST00000524649 GGCXP38435 758 aa10.18□□□□□ -0.78
ARHGAP42-202ENST00000524649 TSKSQ9UJT2 592 aa10.17□□□□□ -0.78
ARHGAP42-202ENST00000524649 EN1Q05925 392 aaPredicted RBP10.16□□□□□ -0.78
ARHGAP42-202ENST00000524649 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
ARHGAP42-202ENST00000524649 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
ARHGAP42-202ENST00000524649 SAMD7Q7Z3H4 446 aa10.15□□□□□ -0.78
ARHGAP42-202ENST00000524649 ZNF775Q96BV0 537 aaPredicted RBP10.15□□□□□ -0.78
ARHGAP42-202ENST00000524649 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
ARHGAP42-202ENST00000524649 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
ARHGAP42-202ENST00000524649 NBPF26B4DH59 902 aa10.12□□□□□ -0.79
ARHGAP42-202ENST00000524649 MAP3K7O43318 606 aa10.12□□□□□ -0.79
ARHGAP42-202ENST00000524649 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
ARHGAP42-202ENST00000524649 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
ARHGAP42-202ENST00000524649 PRSS12P56730 875 aa10.1□□□□□ -0.79
ARHGAP42-202ENST00000524649 DDX12PQ92771 950 aa10.1□□□□□ -0.79
ARHGAP42-202ENST00000524649 ARHGEF1Q92888 912 aaKnown RBP10.1□□□□□ -0.79
ARHGAP42-202ENST00000524649 CDCA7LQ96GN5 454 aa10.1□□□□□ -0.79
ARHGAP42-202ENST00000524649 NBR1Q14596 966 aa10.09□□□□□ -0.79
ARHGAP42-202ENST00000524649 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
ARHGAP42-202ENST00000524649 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
ARHGAP42-202ENST00000524649 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
ARHGAP42-202ENST00000524649 TATDN2Q93075 761 aa10.06□□□□□ -0.8
ARHGAP42-202ENST00000524649 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
ARHGAP42-202ENST00000524649 DGAT1O75907 488 aa10.05□□□□□ -0.8
ARHGAP42-202ENST00000524649 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
ARHGAP42-202ENST00000524649 SMAPO00193 183 aa10.03□□□□□ -0.8
ARHGAP42-202ENST00000524649 APLP1P51693 650 aa10.03□□□□□ -0.8
ARHGAP42-202ENST00000524649 PNMA3Q9UL41 463 aa10.03□□□□□ -0.8
ARHGAP42-202ENST00000524649 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
ARHGAP42-202ENST00000524649 PKDCCQ504Y2 493 aa10.02□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRR14Q9BWN1 585 aa10.02□□□□□ -0.81
ARHGAP42-202ENST00000524649 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRR20EP86478 221 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRR20CP86479 221 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRR20DP86480 221 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRR20BP86481 221 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRR20AP86496 221 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
ARHGAP42-202ENST00000524649 RNF40O75150 1001 aa10□□□□□ -0.81
ARHGAP42-202ENST00000524649 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
ARHGAP42-202ENST00000524649 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
ARHGAP42-202ENST00000524649 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
ARHGAP42-202ENST00000524649 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
ARHGAP42-202ENST00000524649 MYT1Q01538 1121 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms