RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
PCDHGB1-201ENST00000523390 C9orf84Q5VXU9 1444 aa16.88■□□□□ 0.29
PCDHGB1-201ENST00000523390 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
PCDHGB1-201ENST00000523390 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
PCDHGB1-201ENST00000523390 CUL7Q14999 1698 aa16.87■□□□□ 0.29
PCDHGB1-201ENST00000523390 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
PCDHGB1-201ENST00000523390 CCDC7Q96M83 1385 aa16.86■□□□□ 0.29
PCDHGB1-201ENST00000523390 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
PCDHGB1-201ENST00000523390 MS4A1P11836 297 aa16.84■□□□□ 0.29
PCDHGB1-201ENST00000523390 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
PCDHGB1-201ENST00000523390 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.29
PCDHGB1-201ENST00000523390 DAPK1P53355 1430 aa16.83■□□□□ 0.28
PCDHGB1-201ENST00000523390 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.28
PCDHGB1-201ENST00000523390 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
PCDHGB1-201ENST00000523390 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
PCDHGB1-201ENST00000523390 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
PCDHGB1-201ENST00000523390 NAIPQ13075 1403 aa16.82■□□□□ 0.28
PCDHGB1-201ENST00000523390 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
PCDHGB1-201ENST00000523390 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
PCDHGB1-201ENST00000523390 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
PCDHGB1-201ENST00000523390 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 BECN1Q14457 450 aa16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
PCDHGB1-201ENST00000523390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
PCDHGB1-201ENST00000523390 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
PCDHGB1-201ENST00000523390 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
PCDHGB1-201ENST00000523390 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
PCDHGB1-201ENST00000523390 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
PCDHGB1-201ENST00000523390 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
PCDHGB1-201ENST00000523390 ERICH6BQ5W0A0 696 aa16.74■□□□□ 0.27
PCDHGB1-201ENST00000523390 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
PCDHGB1-201ENST00000523390 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
PCDHGB1-201ENST00000523390 CNTLNQ9NXG0 1405 aa16.73■□□□□ 0.27
PCDHGB1-201ENST00000523390 AMPHP49418 695 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 APAF1O14727 1248 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
PCDHGB1-201ENST00000523390 MAP3K1Q13233 1512 aa16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB1-201ENST00000523390 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
PCDHGB1-201ENST00000523390 ABCC5O15440 1437 aa16.7■□□□□ 0.26
PCDHGB1-201ENST00000523390 APBB1O00213 710 aa16.7■□□□□ 0.26
PCDHGB1-201ENST00000523390 PLIN1O60240 522 aa16.69■□□□□ 0.26
PCDHGB1-201ENST00000523390 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 CASC1Q6TDU7 716 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 COG3Q96JB2 828 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
PCDHGB1-201ENST00000523390 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
PCDHGB1-201ENST00000523390 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
PCDHGB1-201ENST00000523390 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
PCDHGB1-201ENST00000523390 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGB1-201ENST00000523390 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
PCDHGB1-201ENST00000523390 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
PCDHGB1-201ENST00000523390 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-201ENST00000523390 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
PCDHGB1-201ENST00000523390 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 E9PSI1 815 aa16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 AKNAQ7Z591 1439 aa16.59■□□□□ 0.25
PCDHGB1-201ENST00000523390 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.25
PCDHGB1-201ENST00000523390 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.25
PCDHGB1-201ENST00000523390 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.25
PCDHGB1-201ENST00000523390 TCERG1O14776 1098 aaKnown RBP16.58■□□□□ 0.24
PCDHGB1-201ENST00000523390 KIF14Q15058 1648 aa16.58■□□□□ 0.24
PCDHGB1-201ENST00000523390 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
PCDHGB1-201ENST00000523390 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
PCDHGB1-201ENST00000523390 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
PCDHGB1-201ENST00000523390 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
PCDHGB1-201ENST00000523390 MTHFSP49914 203 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 CRBNQ96SW2 442 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 NPHP1O15259 732 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
PCDHGB1-201ENST00000523390 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 KCNJ4P48050 445 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
PCDHGB1-201ENST00000523390 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms