RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 FTSJ3Q8IY81 847 aaKnown RBP11.52□□□□□ -0.57
CSMD1-212ENST00000523387 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
CSMD1-212ENST00000523387 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
CSMD1-212ENST00000523387 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
CSMD1-212ENST00000523387 APAF1O14727 1248 aa11.51□□□□□ -0.57
CSMD1-212ENST00000523387 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
CSMD1-212ENST00000523387 CENPJQ9HC77 1338 aaPredicted RBP11.5□□□□□ -0.57
CSMD1-212ENST00000523387 MFAP1P55081 439 aaKnown RBP11.5□□□□□ -0.57
CSMD1-212ENST00000523387 ROCK1Q13464 1354 aa11.5□□□□□ -0.57
CSMD1-212ENST00000523387 CLUAP1Q96AJ1 413 aa11.5□□□□□ -0.57
CSMD1-212ENST00000523387 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
CSMD1-212ENST00000523387 CGNL1Q0VF96 1302 aa11.49□□□□□ -0.57
CSMD1-212ENST00000523387 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
CSMD1-212ENST00000523387 PKNOX2Q96KN3 472 aa11.49□□□□□ -0.57
CSMD1-212ENST00000523387 CDK13Q14004 1512 aaKnown RBP11.49□□□□□ -0.57
CSMD1-212ENST00000523387 ANKRD50Q9ULJ7 1429 aa11.49□□□□□ -0.57
CSMD1-212ENST00000523387 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
CSMD1-212ENST00000523387 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
CSMD1-212ENST00000523387 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
CSMD1-212ENST00000523387 SPATA31E1Q6ZUB1 1445 aa11.49□□□□□ -0.57
CSMD1-212ENST00000523387 ABCA10Q8WWZ4 1543 aa11.48□□□□□ -0.57
CSMD1-212ENST00000523387 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
CSMD1-212ENST00000523387 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
CSMD1-212ENST00000523387 ABCC5O15440 1437 aa11.48□□□□□ -0.57
CSMD1-212ENST00000523387 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
CSMD1-212ENST00000523387 HNRNPMP52272 730 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSMD1-212ENST00000523387 RWDD1Q9H446 243 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-212ENST00000523387 BCAR3O75815 825 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
CSMD1-212ENST00000523387 C8orf34Q49A92 452 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 GRIN2BQ13224 1484 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 EPRSP07814 1512 aaKnown RBP11.47□□□□□ -0.57
CSMD1-212ENST00000523387 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 TEX14Q8IWB6 1497 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 E9PSI1 815 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 PANK1Q8TE04 598 aa11.47□□□□□ -0.57
CSMD1-212ENST00000523387 BCL2L13Q9BXK5 485 aa11.46□□□□□ -0.57
CSMD1-212ENST00000523387 HECW1Q76N89 1606 aa11.46□□□□□ -0.58
CSMD1-212ENST00000523387 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
CSMD1-212ENST00000523387 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
CSMD1-212ENST00000523387 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
CSMD1-212ENST00000523387 CHMP5Q9NZZ3 219 aa11.44□□□□□ -0.58
CSMD1-212ENST00000523387 RRP7AQ9Y3A4 280 aaKnown RBP11.43□□□□□ -0.58
CSMD1-212ENST00000523387 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
CSMD1-212ENST00000523387 TCOF1Q13428 1488 aaKnown RBP11.43□□□□□ -0.58
CSMD1-212ENST00000523387 GBP4Q96PP9 640 aa11.43□□□□□ -0.58
CSMD1-212ENST00000523387 MSNP26038 577 aaKnown RBP11.43□□□□□ -0.58
CSMD1-212ENST00000523387 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
CSMD1-212ENST00000523387 DDX11L8A8MPP1 907 aa11.42□□□□□ -0.58
CSMD1-212ENST00000523387 TRAK2O60296 914 aa11.42□□□□□ -0.58
CSMD1-212ENST00000523387 CUL7Q14999 1698 aa11.42□□□□□ -0.58
CSMD1-212ENST00000523387 CFAP53Q96M91 514 aa11.42□□□□□ -0.58
CSMD1-212ENST00000523387 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
CSMD1-212ENST00000523387 MRE11P49959 708 aa11.41□□□□□ -0.58
CSMD1-212ENST00000523387 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
CSMD1-212ENST00000523387 KDM6BO15054 1643 aa11.41□□□□□ -0.58
CSMD1-212ENST00000523387 MCM4P33991 863 aa11.4□□□□□ -0.58
CSMD1-212ENST00000523387 SLFN5Q08AF3 891 aa11.4□□□□□ -0.58
CSMD1-212ENST00000523387 PARD3Q8TEW0 1356 aa11.4□□□□□ -0.58
CSMD1-212ENST00000523387 MORC1Q86VD1 984 aa11.4□□□□□ -0.58
CSMD1-212ENST00000523387 CC2D2AQ9P2K1 1620 aa11.4□□□□□ -0.58
CSMD1-212ENST00000523387 RRAGDQ9NQL2 400 aaPredicted RBP11.4□□□□□ -0.59
CSMD1-212ENST00000523387 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.59
CSMD1-212ENST00000523387 NESP48681 1621 aa11.39□□□□□ -0.59
CSMD1-212ENST00000523387 ARID3AQ99856 593 aa11.39□□□□□ -0.59
CSMD1-212ENST00000523387 C22orf23Q9BZE7 217 aa11.39□□□□□ -0.59
CSMD1-212ENST00000523387 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
CSMD1-212ENST00000523387 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
CSMD1-212ENST00000523387 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-212ENST00000523387 PRDM2Q13029 1718 aa11.38□□□□□ -0.59
CSMD1-212ENST00000523387 IGHDP01880 384 aa11.38□□□□□ -0.59
CSMD1-212ENST00000523387 PDE3AQ14432 1141 aa11.38□□□□□ -0.59
CSMD1-212ENST00000523387 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
CSMD1-212ENST00000523387 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
CSMD1-212ENST00000523387 RALGAPBQ86X10 1494 aa11.38□□□□□ -0.59
CSMD1-212ENST00000523387 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-212ENST00000523387 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
CSMD1-212ENST00000523387 TBC1D2Q9BYX2 928 aa11.37□□□□□ -0.59
CSMD1-212ENST00000523387 PANK2Q9BZ23 570 aa11.37□□□□□ -0.59
CSMD1-212ENST00000523387 ERBINQ96RT1 1412 aa11.36□□□□□ -0.59
CSMD1-212ENST00000523387 ESPNB1AK53 854 aa11.36□□□□□ -0.59
CSMD1-212ENST00000523387 RRP9O43818 475 aaKnown RBP11.36□□□□□ -0.59
CSMD1-212ENST00000523387 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
CSMD1-212ENST00000523387 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
CSMD1-212ENST00000523387 SEC24BO95487 1268 aa11.36□□□□□ -0.59
CSMD1-212ENST00000523387 PTMAP06454 111 aaKnown RBP11.36□□□□□ -0.59
CSMD1-212ENST00000523387 SMC4Q9NTJ3 1288 aa11.36□□□□□ -0.59
CSMD1-212ENST00000523387 GCC2Q8IWJ2 1684 aa11.36□□□□□ -0.59
CSMD1-212ENST00000523387 GRPEL1Q9HAV7 217 aa11.35□□□□□ -0.59
CSMD1-212ENST00000523387 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
CSMD1-212ENST00000523387 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
CSMD1-212ENST00000523387 PZPP20742 1482 aa11.35□□□□□ -0.59
CSMD1-212ENST00000523387 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
CSMD1-212ENST00000523387 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
CSMD1-212ENST00000523387 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSMD1-212ENST00000523387 DISP3Q9P2K9 1392 aa11.34□□□□□ -0.59
CSMD1-212ENST00000523387 PLEKHH1Q9ULM0 1364 aa11.34□□□□□ -0.59
CSMD1-212ENST00000523387 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
CSMD1-212ENST00000523387 C9orf84Q5VXU9 1444 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms