RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
DENND3-221ENST00000523308 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
DENND3-221ENST00000523308 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
DENND3-221ENST00000523308 WDR62O43379 1518 aa16.56■□□□□ 0.24
DENND3-221ENST00000523308 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
DENND3-221ENST00000523308 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
DENND3-221ENST00000523308 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
DENND3-221ENST00000523308 ARID4BQ4LE39 1312 aaPredicted RBP16.55■□□□□ 0.24
DENND3-221ENST00000523308 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
DENND3-221ENST00000523308 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
DENND3-221ENST00000523308 GCC2Q8IWJ2 1684 aa16.54■□□□□ 0.24
DENND3-221ENST00000523308 DAPK1P53355 1430 aa16.53■□□□□ 0.24
DENND3-221ENST00000523308 ABCC5O15440 1437 aa16.53■□□□□ 0.24
DENND3-221ENST00000523308 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
DENND3-221ENST00000523308 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.24
DENND3-221ENST00000523308 FAM43BQ6ZT52 329 aaPredicted RBP16.52■□□□□ 0.24
DENND3-221ENST00000523308 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
DENND3-221ENST00000523308 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
DENND3-221ENST00000523308 NUP153P49790 1475 aaKnown RBP16.51■□□□□ 0.23
DENND3-221ENST00000523308 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
DENND3-221ENST00000523308 ANKRD30BQ9BXX2 1392 aa16.5■□□□□ 0.23
DENND3-221ENST00000523308 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
DENND3-221ENST00000523308 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
DENND3-221ENST00000523308 CLSTN1O94985 981 aa16.5■□□□□ 0.23
DENND3-221ENST00000523308 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
DENND3-221ENST00000523308 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
DENND3-221ENST00000523308 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
DENND3-221ENST00000523308 KIF7Q2M1P5 1343 aa16.49■□□□□ 0.23
DENND3-221ENST00000523308 GRIPAP1Q4V328 841 aa16.48■□□□□ 0.23
DENND3-221ENST00000523308 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
DENND3-221ENST00000523308 CNTLNQ9NXG0 1405 aa16.48■□□□□ 0.23
DENND3-221ENST00000523308 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
DENND3-221ENST00000523308 PKD2Q13563 968 aa16.46■□□□□ 0.23
DENND3-221ENST00000523308 RGS22Q8NE09 1264 aa16.46■□□□□ 0.23
DENND3-221ENST00000523308 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
DENND3-221ENST00000523308 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
DENND3-221ENST00000523308 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
DENND3-221ENST00000523308 PLCD4Q9BRC7 762 aa16.44■□□□□ 0.22
DENND3-221ENST00000523308 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
DENND3-221ENST00000523308 FAM193AP78312 1265 aa16.44■□□□□ 0.22
DENND3-221ENST00000523308 RPRD2Q5VT52 1461 aaKnown RBP16.43■□□□□ 0.22
DENND3-221ENST00000523308 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
DENND3-221ENST00000523308 NCOA1Q15788 1441 aa16.43■□□□□ 0.22
DENND3-221ENST00000523308 AKNAQ7Z591 1439 aa16.43■□□□□ 0.22
DENND3-221ENST00000523308 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
DENND3-221ENST00000523308 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
DENND3-221ENST00000523308 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
DENND3-221ENST00000523308 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
DENND3-221ENST00000523308 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
DENND3-221ENST00000523308 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
DENND3-221ENST00000523308 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
DENND3-221ENST00000523308 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
DENND3-221ENST00000523308 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
DENND3-221ENST00000523308 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
DENND3-221ENST00000523308 KIF14Q15058 1648 aa16.39■□□□□ 0.21
DENND3-221ENST00000523308 CENPJQ9HC77 1338 aaPredicted RBP16.39■□□□□ 0.21
DENND3-221ENST00000523308 TMEM51Q9NW97 253 aa16.39■□□□□ 0.21
DENND3-221ENST00000523308 ROCK1Q13464 1354 aa16.39■□□□□ 0.21
DENND3-221ENST00000523308 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
DENND3-221ENST00000523308 PZPP20742 1482 aa16.38■□□□□ 0.21
DENND3-221ENST00000523308 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
DENND3-221ENST00000523308 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
DENND3-221ENST00000523308 HNRNPMP52272 730 aaKnown RBP eCLIP16.37■□□□□ 0.21
DENND3-221ENST00000523308 PSMD1Q99460 953 aa16.36■□□□□ 0.21
DENND3-221ENST00000523308 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
DENND3-221ENST00000523308 VGLL3A8MV65 326 aa16.35■□□□□ 0.21
DENND3-221ENST00000523308 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
DENND3-221ENST00000523308 USP47Q96K76 1375 aa16.35■□□□□ 0.21
DENND3-221ENST00000523308 NUP155O75694 1391 aa16.35■□□□□ 0.21
DENND3-221ENST00000523308 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
DENND3-221ENST00000523308 SPATA31E1Q6ZUB1 1445 aa16.34■□□□□ 0.21
DENND3-221ENST00000523308 PRDM16Q9HAZ2 1276 aa16.32■□□□□ 0.2
DENND3-221ENST00000523308 NEFMP07197 916 aa16.32■□□□□ 0.2
DENND3-221ENST00000523308 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
DENND3-221ENST00000523308 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
DENND3-221ENST00000523308 CLGNO14967 610 aa16.32■□□□□ 0.2
DENND3-221ENST00000523308 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
DENND3-221ENST00000523308 DCAF11Q8TEB1 546 aa16.31■□□□□ 0.2
DENND3-221ENST00000523308 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
DENND3-221ENST00000523308 ANKRD50Q9ULJ7 1429 aa16.3■□□□□ 0.2
DENND3-221ENST00000523308 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
DENND3-221ENST00000523308 MCCP23508 829 aa16.3■□□□□ 0.2
DENND3-221ENST00000523308 CERS3Q8IU89 383 aa16.3■□□□□ 0.2
DENND3-221ENST00000523308 ANKRD30AQ9BXX3 1397 aa16.3■□□□□ 0.2
DENND3-221ENST00000523308 KIAA1107Q9UPP5 1409 aa16.3■□□□□ 0.2
DENND3-221ENST00000523308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
DENND3-221ENST00000523308 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
DENND3-221ENST00000523308 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
DENND3-221ENST00000523308 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
DENND3-221ENST00000523308 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
DENND3-221ENST00000523308 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
DENND3-221ENST00000523308 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
DENND3-221ENST00000523308 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
DENND3-221ENST00000523308 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
DENND3-221ENST00000523308 PTMSP20962 102 aa16.27■□□□□ 0.19
DENND3-221ENST00000523308 MMP14P50281 582 aa16.27■□□□□ 0.19
DENND3-221ENST00000523308 HDAC5Q9UQL6 1122 aa16.27■□□□□ 0.19
DENND3-221ENST00000523308 DHX29Q7Z478 1369 aaKnown RBP16.27■□□□□ 0.19
DENND3-221ENST00000523308 ZNF526Q8TF50 670 aaPredicted RBP16.26■□□□□ 0.19
DENND3-221ENST00000523308 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms