RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.86
CHMP7-210ENST00000523091 PLCH2O75038 1416 aa20.39■□□□□ 0.86
CHMP7-210ENST00000523091 MAST1Q9Y2H9 1570 aa20.39■□□□□ 0.85
CHMP7-210ENST00000523091 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
CHMP7-210ENST00000523091 ST20-MTHFSA0A0A6YYL1 179 aa20.36■□□□□ 0.85
CHMP7-210ENST00000523091 NEFLP07196 543 aa20.36■□□□□ 0.85
CHMP7-210ENST00000523091 UHRF1BP1LA0JNW5 1464 aa20.36■□□□□ 0.85
CHMP7-210ENST00000523091 PLA2R1Q13018 1463 aa20.36■□□□□ 0.85
CHMP7-210ENST00000523091 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
CHMP7-210ENST00000523091 TRAPPC8Q9Y2L5 1435 aa20.35■□□□□ 0.85
CHMP7-210ENST00000523091 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
CHMP7-210ENST00000523091 UNC13BO14795 1591 aa20.34■□□□□ 0.85
CHMP7-210ENST00000523091 PLXNC1O60486 1568 aa20.33■□□□□ 0.85
CHMP7-210ENST00000523091 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
CHMP7-210ENST00000523091 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
CHMP7-210ENST00000523091 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
CHMP7-210ENST00000523091 NBPF1Q3BBV0 1214 aa20.3■□□□□ 0.84
CHMP7-210ENST00000523091 ABCC1P33527 1531 aa20.3■□□□□ 0.84
CHMP7-210ENST00000523091 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
CHMP7-210ENST00000523091 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
CHMP7-210ENST00000523091 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.84
CHMP7-210ENST00000523091 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.83
CHMP7-210ENST00000523091 SPAG9O60271 1321 aaKnown RBP20.26■□□□□ 0.83
CHMP7-210ENST00000523091 A2MP01023 1474 aa20.26■□□□□ 0.83
CHMP7-210ENST00000523091 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
CHMP7-210ENST00000523091 MAGI2Q86UL8 1455 aa20.23■□□□□ 0.83
CHMP7-210ENST00000523091 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
CHMP7-210ENST00000523091 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
CHMP7-210ENST00000523091 WDR7Q9Y4E6 1490 aa20.2■□□□□ 0.83
CHMP7-210ENST00000523091 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
CHMP7-210ENST00000523091 MYT1LQ9UL68 1186 aa20.18■□□□□ 0.82
CHMP7-210ENST00000523091 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
CHMP7-210ENST00000523091 FANCAO15360 1455 aa20.16■□□□□ 0.82
CHMP7-210ENST00000523091 ATP10AO60312 1499 aa20.16■□□□□ 0.82
CHMP7-210ENST00000523091 RTEL1-TNFRSF6BF6WH68 1400 aa20.14■□□□□ 0.81
CHMP7-210ENST00000523091 ARAP3Q8WWN8 1544 aa20.13■□□□□ 0.81
CHMP7-210ENST00000523091 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
CHMP7-210ENST00000523091 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
CHMP7-210ENST00000523091 E9PCH4 1651 aa20.12■□□□□ 0.81
CHMP7-210ENST00000523091 ASXL2Q76L83 1435 aa20.12■□□□□ 0.81
CHMP7-210ENST00000523091 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
CHMP7-210ENST00000523091 KIF3BO15066 747 aa20.11■□□□□ 0.81
CHMP7-210ENST00000523091 PNISRQ8TF01 805 aaKnown RBP20.11■□□□□ 0.81
CHMP7-210ENST00000523091 TESK2Q96S53 571 aa20.11■□□□□ 0.81
CHMP7-210ENST00000523091 ABCA9Q8IUA7 1624 aa20.1■□□□□ 0.81
CHMP7-210ENST00000523091 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
CHMP7-210ENST00000523091 ADGRL1O94910 1474 aa20.09■□□□□ 0.81
CHMP7-210ENST00000523091 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
CHMP7-210ENST00000523091 PRDM15P57071 1507 aaPredicted RBP20.08■□□□□ 0.81
CHMP7-210ENST00000523091 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
CHMP7-210ENST00000523091 INO80Q9ULG1 1556 aaPredicted RBP20.05■□□□□ 0.8
CHMP7-210ENST00000523091 PER1O15534 1290 aaPredicted RBP20.05■□□□□ 0.8
CHMP7-210ENST00000523091 RALBP1Q15311 655 aa20.05■□□□□ 0.8
CHMP7-210ENST00000523091 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
CHMP7-210ENST00000523091 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
CHMP7-210ENST00000523091 EIF2AK4Q9P2K8 1649 aaKnown RBP20.04■□□□□ 0.8
CHMP7-210ENST00000523091 DEPDC5O75140 1603 aa20.03■□□□□ 0.8
CHMP7-210ENST00000523091 LAMC1P11047 1609 aa20.03■□□□□ 0.8
CHMP7-210ENST00000523091 TRPM2O94759 1503 aa20.03■□□□□ 0.8
CHMP7-210ENST00000523091 PTPRTO14522 1441 aa20.02■□□□□ 0.8
CHMP7-210ENST00000523091 CLTCL1P53675 1640 aa20.02■□□□□ 0.8
CHMP7-210ENST00000523091 PANK3Q9H999 370 aa20.02■□□□□ 0.8
CHMP7-210ENST00000523091 CC2D1BQ5T0F9 858 aaKnown RBP20.01■□□□□ 0.79
CHMP7-210ENST00000523091 KANK1Q14678 1352 aa20.01■□□□□ 0.79
CHMP7-210ENST00000523091 SPHKAPQ2M3C7 1700 aa20.01■□□□□ 0.79
CHMP7-210ENST00000523091 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHMP7-210ENST00000523091 TMF1P82094 1093 aa20.01■□□□□ 0.79
CHMP7-210ENST00000523091 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
CHMP7-210ENST00000523091 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
CHMP7-210ENST00000523091 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
CHMP7-210ENST00000523091 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
CHMP7-210ENST00000523091 TET3O43151 1660 aa19.99■□□□□ 0.79
CHMP7-210ENST00000523091 PARD3Q8TEW0 1356 aa19.98■□□□□ 0.79
CHMP7-210ENST00000523091 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
CHMP7-210ENST00000523091 VWDEQ8N2E2 1590 aa19.98■□□□□ 0.79
CHMP7-210ENST00000523091 LRPPRCP42704 1394 aaKnown RBP19.97■□□□□ 0.79
CHMP7-210ENST00000523091 CEP152O94986 1710 aa19.97■□□□□ 0.79
CHMP7-210ENST00000523091 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
CHMP7-210ENST00000523091 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
CHMP7-210ENST00000523091 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
CHMP7-210ENST00000523091 MROH1Q8NDA8 1641 aa19.96■□□□□ 0.79
CHMP7-210ENST00000523091 NLRP13Q86W25 1043 aa19.96■□□□□ 0.79
CHMP7-210ENST00000523091 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
CHMP7-210ENST00000523091 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
CHMP7-210ENST00000523091 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
CHMP7-210ENST00000523091 PRKCSHP14314 528 aaPredicted RBP19.93■□□□□ 0.78
CHMP7-210ENST00000523091 B4GALNT3Q6L9W6 998 aa19.93■□□□□ 0.78
CHMP7-210ENST00000523091 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
CHMP7-210ENST00000523091 ERICH6BQ5W0A0 696 aa19.92■□□□□ 0.78
CHMP7-210ENST00000523091 ZNF518AQ6AHZ1 1483 aa19.9■□□□□ 0.78
CHMP7-210ENST00000523091 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
CHMP7-210ENST00000523091 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
CHMP7-210ENST00000523091 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
CHMP7-210ENST00000523091 GGT6Q6P531 493 aa19.89■□□□□ 0.77
CHMP7-210ENST00000523091 SCAF11Q99590 1463 aaKnown RBP19.88■□□□□ 0.77
CHMP7-210ENST00000523091 WASHC2CQ9Y4E1 1318 aa19.87■□□□□ 0.77
CHMP7-210ENST00000523091 STAC3Q96MF2 364 aa19.86■□□□□ 0.77
CHMP7-210ENST00000523091 EFCAB6Q5THR3 1501 aa19.86■□□□□ 0.77
CHMP7-210ENST00000523091 PPRC1Q5VV67 1664 aaKnown RBP19.86■□□□□ 0.77
CHMP7-210ENST00000523091 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms