RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 RNF17Q9BXT8 1623 aaKnown RBP38.19■■■■□ 3.7
NKX2-1-204ENST00000522719 UNC13BO14795 1591 aa38.18■■■■□ 3.7
NKX2-1-204ENST00000522719 PRDM15P57071 1507 aaPredicted RBP38.1■■■■□ 3.69
NKX2-1-204ENST00000522719 MROH1Q8NDA8 1641 aa38.08■■■■□ 3.69
NKX2-1-204ENST00000522719 TRIM52Q96A61 297 aa38.07■■■■□ 3.69
NKX2-1-204ENST00000522719 KDM5DQ9BY66 1539 aa38.07■■■■□ 3.68
NKX2-1-204ENST00000522719 ARID4BQ4LE39 1312 aaPredicted RBP38.06■■■■□ 3.68
NKX2-1-204ENST00000522719 NUP155O75694 1391 aa38.04■■■■□ 3.68
NKX2-1-204ENST00000522719 GGT6Q6P531 493 aa38.04■■■■□ 3.68
NKX2-1-204ENST00000522719 KANK1Q14678 1352 aa38.03■■■■□ 3.68
NKX2-1-204ENST00000522719 IQGAP3Q86VI3 1631 aa38.03■■■■□ 3.68
NKX2-1-204ENST00000522719 VWDEQ8N2E2 1590 aa38.02■■■■□ 3.68
NKX2-1-204ENST00000522719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.02■■■■□ 3.68
NKX2-1-204ENST00000522719 PPP6R1Q9UPN7 881 aa38.02■■■■□ 3.68
NKX2-1-204ENST00000522719 FAM135AQ9P2D6 1515 aa37.99■■■■□ 3.67
NKX2-1-204ENST00000522719 ZC3H13Q5T200 1668 aaKnown RBP37.96■■■■□ 3.67
NKX2-1-204ENST00000522719 PZPP20742 1482 aa37.94■■■■□ 3.66
NKX2-1-204ENST00000522719 CEP152O94986 1710 aa37.92■■■■□ 3.66
NKX2-1-204ENST00000522719 LMTK2Q8IWU2 1503 aa37.92■■■■□ 3.66
NKX2-1-204ENST00000522719 MLECQ14165 292 aa37.92■■■■□ 3.66
NKX2-1-204ENST00000522719 WASHC2CQ9Y4E1 1318 aa37.89■■■■□ 3.66
NKX2-1-204ENST00000522719 ABCC3O15438 1527 aa37.89■■■■□ 3.66
NKX2-1-204ENST00000522719 TET3O43151 1660 aa37.89■■■■□ 3.66
NKX2-1-204ENST00000522719 MPHOSPH9Q99550 1183 aa37.88■■■■□ 3.66
NKX2-1-204ENST00000522719 SLC4A1APQ9BWU0 796 aaKnown RBP37.88■■■■□ 3.66
NKX2-1-204ENST00000522719 DHX57Q6P158 1386 aaKnown RBP37.84■■■■□ 3.65
NKX2-1-204ENST00000522719 CLTCQ00610 1675 aaKnown RBP37.83■■■■□ 3.65
NKX2-1-204ENST00000522719 CAMSAP1Q5T5Y3 1602 aa37.82■■■■□ 3.64
NKX2-1-204ENST00000522719 FER1L4A9Z1Z3 1794 aa37.82■■■■□ 3.64
NKX2-1-204ENST00000522719 ESF1Q9H501 851 aaKnown RBP37.81■■■■□ 3.64
NKX2-1-204ENST00000522719 CNTLNQ9NXG0 1405 aa37.8■■■■□ 3.64
NKX2-1-204ENST00000522719 ADAMTSL3P82987 1691 aa37.79■■■■□ 3.64
NKX2-1-204ENST00000522719 EFCAB6Q5THR3 1501 aa37.79■■■■□ 3.64
NKX2-1-204ENST00000522719 MROH2AA6NES4 1674 aa37.77■■■■□ 3.64
NKX2-1-204ENST00000522719 E9PCH4 1651 aa37.77■■■■□ 3.64
NKX2-1-204ENST00000522719 PKD2Q13563 968 aa37.76■■■■□ 3.63
NKX2-1-204ENST00000522719 ARHGAP31Q2M1Z3 1444 aa37.74■■■■□ 3.63
NKX2-1-204ENST00000522719 RPRD2Q5VT52 1461 aaKnown RBP37.72■■■■□ 3.63
NKX2-1-204ENST00000522719 MADDQ8WXG6 1647 aa37.71■■■■□ 3.63
NKX2-1-204ENST00000522719 AEBP2Q6ZN18 517 aaPredicted RBP37.7■■■■□ 3.63
NKX2-1-204ENST00000522719 NPATQ14207 1427 aa37.67■■■■□ 3.62
NKX2-1-204ENST00000522719 CFAP65Q6ZU64 1925 aaKnown RBP37.65■■■■□ 3.62
NKX2-1-204ENST00000522719 ZMYM3Q14202 1370 aa37.65■■■■□ 3.62
NKX2-1-204ENST00000522719 RIMS1Q86UR5 1692 aaKnown RBP37.64■■■■□ 3.62
NKX2-1-204ENST00000522719 CCER1Q8TC90 406 aaPredicted RBP37.64■■■■□ 3.62
NKX2-1-204ENST00000522719 FOXD1Q16676 465 aa37.61■■■■□ 3.61
NKX2-1-204ENST00000522719 CLSPNQ9HAW4 1339 aa37.61■■■■□ 3.61
NKX2-1-204ENST00000522719 SPHKAPQ2M3C7 1700 aa37.6■■■■□ 3.61
NKX2-1-204ENST00000522719 C3P01024 1663 aa37.59■■■■□ 3.61
NKX2-1-204ENST00000522719 PREX1Q8TCU6 1659 aa37.57■■■■□ 3.61
NKX2-1-204ENST00000522719 ANKRD30BQ9BXX2 1392 aa37.57■■■■□ 3.6
NKX2-1-204ENST00000522719 PTPRTO14522 1441 aa37.56■■■■□ 3.6
NKX2-1-204ENST00000522719 NOS1P29475 1434 aa37.52■■■■□ 3.6
NKX2-1-204ENST00000522719 TRPM2O94759 1503 aa37.51■■■■□ 3.59
NKX2-1-204ENST00000522719 SPATA31D1Q6ZQQ2 1576 aa37.5■■■■□ 3.59
NKX2-1-204ENST00000522719 ERVK-7P63135 1459 aa37.5■■■■□ 3.59
NKX2-1-204ENST00000522719 PLA2R1Q13018 1463 aa37.5■■■■□ 3.59
NKX2-1-204ENST00000522719 FBXO31Q5XUX0 539 aaPredicted RBP37.45■■■■□ 3.59
NKX2-1-204ENST00000522719 PTPRMP28827 1452 aa37.44■■■■□ 3.58
NKX2-1-204ENST00000522719 SYNMO15061 1565 aa37.43■■■■□ 3.58
NKX2-1-204ENST00000522719 CEBPAP49715 358 aaPredicted RBP37.43■■■■□ 3.58
NKX2-1-204ENST00000522719 KDM4FA0A1W2PPD8 638 aa37.42■■■■□ 3.58
NKX2-1-204ENST00000522719 CCDC144AA2RUR9 1427 aa37.42■■■■□ 3.58
NKX2-1-204ENST00000522719 PIK3C2BO00750 1634 aa37.38■■■■□ 3.57
NKX2-1-204ENST00000522719 CLTCL1P53675 1640 aa37.38■■■■□ 3.57
NKX2-1-204ENST00000522719 SETD1BQ9UPS6 1966 aaKnown RBP37.37■■■■□ 3.57
NKX2-1-204ENST00000522719 SLC52A1Q9NWF4 448 aa37.36■■■■□ 3.57
NKX2-1-204ENST00000522719 TNRQ92752 1358 aa37.36■■■■□ 3.57
NKX2-1-204ENST00000522719 SIN3AQ96ST3 1273 aa37.33■■■■□ 3.57
NKX2-1-204ENST00000522719 KIF1BO60333 1816 aa37.32■■■■□ 3.57
NKX2-1-204ENST00000522719 UGGT1Q9NYU2 1555 aa37.32■■■■□ 3.56
NKX2-1-204ENST00000522719 PLPPR3Q6T4P5 718 aa37.3■■■■□ 3.56
NKX2-1-204ENST00000522719 NLRP1Q9C000 1473 aa37.26■■■■□ 3.56
NKX2-1-204ENST00000522719 NEUROD1Q13562 356 aa37.26■■■■□ 3.55
NKX2-1-204ENST00000522719 IDI1Q13907 227 aa37.26■■■■□ 3.55
NKX2-1-204ENST00000522719 NEURL4Q96JN8 1562 aa37.24■■■■□ 3.55
NKX2-1-204ENST00000522719 MYO3AQ8NEV4 1616 aa37.21■■■■□ 3.55
NKX2-1-204ENST00000522719 KDM5AP29375 1690 aaKnown RBP37.21■■■■□ 3.55
NKX2-1-204ENST00000522719 SPATA31E1Q6ZUB1 1445 aa37.18■■■■□ 3.54
NKX2-1-204ENST00000522719 TMEM131LA2VDJ0 1609 aa37.17■■■■□ 3.54
NKX2-1-204ENST00000522719 ADGRB3O60242 1522 aa37.17■■■■□ 3.54
NKX2-1-204ENST00000522719 TIMELESSQ9UNS1 1208 aa37.16■■■■□ 3.54
NKX2-1-204ENST00000522719 MYO5BQ9ULV0 1848 aa37.15■■■■□ 3.54
NKX2-1-204ENST00000522719 ZNF142P52746 1687 aaPredicted RBP37.13■■■■□ 3.53
NKX2-1-204ENST00000522719 A2ML1A8K2U0 1454 aa37.12■■■■□ 3.53
NKX2-1-204ENST00000522719 UBR1Q8IWV7 1749 aa37.12■■■■□ 3.53
NKX2-1-204ENST00000522719 TONSLQ96HA7 1378 aa37.12■■■■□ 3.53
NKX2-1-204ENST00000522719 CHGAP10645 457 aaKnown RBP37.1■■■■□ 3.53
NKX2-1-204ENST00000522719 STAG3Q9UJ98 1225 aa37.1■■■■□ 3.53
NKX2-1-204ENST00000522719 CEP170BQ9Y4F5 1589 aaPredicted RBP37.1■■■■□ 3.53
NKX2-1-204ENST00000522719 UHRF1BP1Q6BDS2 1440 aa37.07■■■■□ 3.52
NKX2-1-204ENST00000522719 RGL3Q3MIN7 710 aa37.05■■■■□ 3.52
NKX2-1-204ENST00000522719 RPGRIP1LQ68CZ1 1315 aa37.02■■■■□ 3.52
NKX2-1-204ENST00000522719 ZNF326Q5BKZ1 582 aaKnown RBP37.02■■■■□ 3.52
NKX2-1-204ENST00000522719 L3MBTL2Q969R5 705 aa37.02■■■■□ 3.52
NKX2-1-204ENST00000522719 ZEB1P37275 1124 aaPredicted RBP37.01■■■■□ 3.51
NKX2-1-204ENST00000522719 IFT172Q9UG01 1749 aa37■■■■□ 3.51
NKX2-1-204ENST00000522719 PPLO60437 1756 aa36.99■■■■□ 3.51
NKX2-1-204ENST00000522719 THEMISQ8N1K5 641 aaPredicted RBP36.98■■■■□ 3.51
NKX2-1-204ENST00000522719 STAC3Q96MF2 364 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms