RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 HRCP23327 699 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 PRIM1P49642 420 aaKnown RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 ATN1P54259 1190 aaPredicted RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 DIXDC1Q155Q3 683 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 PROSER2Q86WR7 435 aaPredicted RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 FNBP4Q8N3X1 1017 aaPredicted RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 CCDC82Q8N4S0 544 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 CERKQ8TCT0 537 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 UPF1Q92900 1129 aaKnown RBP eCLIP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 FBXW7Q969H0 707 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 CLUAP1Q96AJ1 413 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 REPIN1Q9BWE0 567 aaKnown RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 NPDC1Q9NQX5 325 aaPredicted RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 RBM27Q9P2N5 1060 aaKnown RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 RAD21O60216 631 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 OATP04181 439 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 SSTR3P32745 418 aaPredicted RBP2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 TMEM92Q6UXU6 159 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 BANK1Q8NDB2 785 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 ARID3AQ99856 593 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 TRAIPQ9BWF2 469 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 FAM217BQ9NTX9 383 aaPredicted RBP2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 SERPINA10Q9UK55 444 aa2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 CCDC9Q9Y3X0 531 aaKnown RBP2.36□□□□□ -2.03
RN7SKP88-201ENST00000516847 MAP3K7O43318 606 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 MDM2Q00987 491 aaPredicted RBP2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 TUSC1Q2TAM9 212 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 PPP2R2DQ66LE6 453 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 TYW1BQ6NUM6 668 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 NPM2Q86SE8 214 aaKnown RBP2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 METTL3Q86U44 580 aaKnown RBP2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 KCTD17Q8N5Z5 321 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 SLAIN1Q8ND83 568 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 JPH4Q96JJ6 628 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 BEGAINQ9BUH8 593 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 CDHR5Q9HBB8 845 aa2.35□□□□□ -2.03
RN7SKP88-201ENST00000516847 PPP1R15AO75807 674 aaPredicted RBP2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 GJA5P36382 358 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 CLK2P49760 499 aaKnown RBP2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 TMEM259Q4ZIN3 620 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 MYSM1Q5VVJ2 828 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 TTC13Q8NBP0 860 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 PXYLP1Q8TE99 480 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 CCDC97Q96F63 343 aaPredicted RBP2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 PHOX2BQ99453 314 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 PLSCR2Q9NRY7 297 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 COG6Q9Y2V7 657 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 PCDHGA10Q9Y5H3 936 aa2.34□□□□□ -2.03
RN7SKP88-201ENST00000516847 KDM4FA0A1W2PPD8 638 aa2.33□□□□□ -2.04
RN7SKP88-201ENST00000516847 RFC5P40937 340 aa2.33□□□□□ -2.04
RN7SKP88-201ENST00000516847 PDE4CQ08493 712 aa2.33□□□□□ -2.04
RN7SKP88-201ENST00000516847 C3orf67Q6ZVT6 689 aa2.33□□□□□ -2.04
RN7SKP88-201ENST00000516847 NECTIN2Q92692 538 aa2.33□□□□□ -2.04
RN7SKP88-201ENST00000516847 ADGRG1Q9Y653 693 aa2.33□□□□□ -2.04
RN7SKP88-201ENST00000516847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 PATL2C9JE40 543 aaKnown RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 SEC24BO95487 1268 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 FOSBP53539 338 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 TSR1Q2NL82 804 aaKnown RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 PADI6Q6TGC4 694 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 WWC1Q8IX03 1113 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 PROCA1Q8NCQ7 364 aaPredicted RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 RBM46Q8TBY0 533 aaKnown RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 SLC39A7Q92504 469 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 POM121Q96HA1 1249 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 TBC1D2Q9BYX2 928 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 PRM3Q9NNZ6 103 aa2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 ZNF777Q9ULD5 760 aaPredicted RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 ZNF330Q9Y3S2 320 aaPredicted RBP2.32□□□□□ -2.04
RN7SKP88-201ENST00000516847 SPTLC1O15269 473 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 C7P10643 843 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 C6orf132Q5T0Z8 1188 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 SULF1Q8IWU6 871 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 MTMR14Q8NCE2 650 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 ZDHHC16Q969W1 377 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 RBM33Q96EV2 1170 aaKnown RBP2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 POLR3EQ9NVU0 708 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 COLQQ9Y215 455 aaPredicted RBP2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 PCDHGA4Q9Y5G9 962 aa2.31□□□□□ -2.04
RN7SKP88-201ENST00000516847 POTEFA5A3E0 1075 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 HAX1O00165 279 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 CD46P15529 392 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 PRSS12P56730 875 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 PRPF38BQ5VTL8 546 aaKnown RBP2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 RSBN1LQ6PCB5 846 aaPredicted RBP2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 RIC3Q7Z5B4 369 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 RETREG2Q8NC44 543 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 SPIRE2Q8WWL2 714 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 CDCA7LQ96GN5 454 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 ZSWIM6Q9HCJ5 1215 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 SNRKQ9NRH2 765 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 LIMD1Q9UGP4 676 aa2.3□□□□□ -2.04
RN7SKP88-201ENST00000516847 ACIN1Q9UKV3 1341 aaKnown RBP2.29□□□□□ -2.04
RN7SKP88-201ENST00000516847 PSDA5PKW4 1024 aaPredicted RBP2.29□□□□□ -2.04
RN7SKP88-201ENST00000516847 LILRB3O75022 631 aa2.29□□□□□ -2.04
RN7SKP88-201ENST00000516847 DNAJB2P25686 324 aa2.29□□□□□ -2.04
RN7SKP88-201ENST00000516847 USP46P62068 366 aa2.29□□□□□ -2.04
RN7SKP88-201ENST00000516847 WASHC4Q2M389 1173 aa2.29□□□□□ -2.04
RN7SKP88-201ENST00000516847 FAM161AQ3B820 660 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms