RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 ARIH1Q9Y4X5 557 aaPredicted RBP7.44□□□□□ -1.22
SCARNA16.2-201ENST00000516520 HCSTQ9UBK5 93 aa7.43□□□□□ -1.22
SCARNA16.2-201ENST00000516520 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
SCARNA16.2-201ENST00000516520 DDX12PQ92771 950 aa7.4□□□□□ -1.22
SCARNA16.2-201ENST00000516520 GOLGA8CPA6NN73 597 aa7.39□□□□□ -1.23
SCARNA16.2-201ENST00000516520 BHMG1C9JSJ3 638 aaPredicted RBP7.39□□□□□ -1.23
SCARNA16.2-201ENST00000516520 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
SCARNA16.2-201ENST00000516520 KCTD12Q96CX2 325 aaKnown RBP7.39□□□□□ -1.23
SCARNA16.2-201ENST00000516520 NBR1Q14596 966 aa7.38□□□□□ -1.23
SCARNA16.2-201ENST00000516520 C6orf132Q5T0Z8 1188 aa7.38□□□□□ -1.23
SCARNA16.2-201ENST00000516520 RABGEF1Q9UJ41 708 aa7.38□□□□□ -1.23
SCARNA16.2-201ENST00000516520 COL9A1P20849 921 aa7.37□□□□□ -1.23
SCARNA16.2-201ENST00000516520 EN1Q05925 392 aaPredicted RBP7.37□□□□□ -1.23
SCARNA16.2-201ENST00000516520 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
SCARNA16.2-201ENST00000516520 ONECUT3O60422 494 aaPredicted RBP7.36□□□□□ -1.23
SCARNA16.2-201ENST00000516520 RBM33Q96EV2 1170 aaKnown RBP7.36□□□□□ -1.23
SCARNA16.2-201ENST00000516520 MAP3K7O43318 606 aa7.35□□□□□ -1.23
SCARNA16.2-201ENST00000516520 PROX2Q3B8N5 592 aa7.35□□□□□ -1.23
SCARNA16.2-201ENST00000516520 LAPTM4BQ86VI4 370 aa7.34□□□□□ -1.23
SCARNA16.2-201ENST00000516520 WNT2BQ93097 391 aa7.34□□□□□ -1.23
SCARNA16.2-201ENST00000516520 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
SCARNA16.2-201ENST00000516520 THSD4Q6ZMP0 1018 aa7.33□□□□□ -1.24
SCARNA16.2-201ENST00000516520 ARHGEF1Q92888 912 aaKnown RBP7.33□□□□□ -1.24
SCARNA16.2-201ENST00000516520 TRIM6-TRIM34B2RNG4 842 aa7.32□□□□□ -1.24
SCARNA16.2-201ENST00000516520 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
SCARNA16.2-201ENST00000516520 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
SCARNA16.2-201ENST00000516520 PTPN5P54829 565 aa7.31□□□□□ -1.24
SCARNA16.2-201ENST00000516520 P3H3Q8IVL6 736 aa7.31□□□□□ -1.24
SCARNA16.2-201ENST00000516520 PLA2G2EQ9NZK7 142 aa7.31□□□□□ -1.24
SCARNA16.2-201ENST00000516520 KIAA1468Q9P260 1216 aa7.31□□□□□ -1.24
SCARNA16.2-201ENST00000516520 PLCB2Q00722 1185 aa7.3□□□□□ -1.24
SCARNA16.2-201ENST00000516520 TSR1Q2NL82 804 aaKnown RBP7.3□□□□□ -1.24
SCARNA16.2-201ENST00000516520 PACS2Q86VP3 889 aa7.29□□□□□ -1.24
SCARNA16.2-201ENST00000516520 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
SCARNA16.2-201ENST00000516520 OSBPP22059 807 aa7.28□□□□□ -1.24
SCARNA16.2-201ENST00000516520 FAM98CQ17RN3 349 aaKnown RBP7.28□□□□□ -1.24
SCARNA16.2-201ENST00000516520 ZFRQ96KR1 1074 aaKnown RBP7.27□□□□□ -1.25
SCARNA16.2-201ENST00000516520 PRSS12P56730 875 aa7.26□□□□□ -1.25
SCARNA16.2-201ENST00000516520 CDCA7LQ96GN5 454 aa7.26□□□□□ -1.25
SCARNA16.2-201ENST00000516520 RBM27Q9P2N5 1060 aaKnown RBP7.26□□□□□ -1.25
SCARNA16.2-201ENST00000516520 SEPT9Q9UHD8 586 aaPredicted RBP7.26□□□□□ -1.25
SCARNA16.2-201ENST00000516520 SOWAHBA6NEL2 793 aa7.25□□□□□ -1.25
SCARNA16.2-201ENST00000516520 PRIM1P49642 420 aaKnown RBP7.25□□□□□ -1.25
SCARNA16.2-201ENST00000516520 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
SCARNA16.2-201ENST00000516520 TSKSQ9UJT2 592 aa7.25□□□□□ -1.25
SCARNA16.2-201ENST00000516520 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
SCARNA16.2-201ENST00000516520 BCAMP50895 628 aa7.23□□□□□ -1.25
SCARNA16.2-201ENST00000516520 LRCH3Q96II8 777 aa7.23□□□□□ -1.25
SCARNA16.2-201ENST00000516520 CDHR5Q9HBB8 845 aa7.23□□□□□ -1.25
SCARNA16.2-201ENST00000516520 IFFO2Q5TF58 517 aa7.22□□□□□ -1.25
SCARNA16.2-201ENST00000516520 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
SCARNA16.2-201ENST00000516520 MLLT3P42568 568 aaPredicted RBP7.2□□□□□ -1.26
SCARNA16.2-201ENST00000516520 TATDN2Q93075 761 aa7.2□□□□□ -1.26
SCARNA16.2-201ENST00000516520 TSR3Q9UJK0 312 aaKnown RBP7.2□□□□□ -1.26
SCARNA16.2-201ENST00000516520 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
SCARNA16.2-201ENST00000516520 HAP1P54257 671 aaPredicted RBP7.19□□□□□ -1.26
SCARNA16.2-201ENST00000516520 FAM198AQ9UFP1 575 aa7.19□□□□□ -1.26
SCARNA16.2-201ENST00000516520 HPS5Q9UPZ3 1129 aa7.19□□□□□ -1.26
SCARNA16.2-201ENST00000516520 HDGFP51858 240 aaKnown RBP7.18□□□□□ -1.26
SCARNA16.2-201ENST00000516520 TTC13Q8NBP0 860 aa7.18□□□□□ -1.26
SCARNA16.2-201ENST00000516520 SMAPO00193 183 aa7.17□□□□□ -1.26
SCARNA16.2-201ENST00000516520 PADI6Q6TGC4 694 aa7.17□□□□□ -1.26
SCARNA16.2-201ENST00000516520 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
SCARNA16.2-201ENST00000516520 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
SCARNA16.2-201ENST00000516520 WBP1LQ9NX94 342 aa7.17□□□□□ -1.26
SCARNA16.2-201ENST00000516520 ITGBL1O95965 494 aaPredicted RBP7.16□□□□□ -1.26
SCARNA16.2-201ENST00000516520 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
SCARNA16.2-201ENST00000516520 PPP4CP60510 307 aa7.15□□□□□ -1.26
SCARNA16.2-201ENST00000516520 PTGDRQ13258 359 aa7.15□□□□□ -1.26
SCARNA16.2-201ENST00000516520 SMYD5Q6GMV2 418 aa7.15□□□□□ -1.26
SCARNA16.2-201ENST00000516520 SAMD7Q7Z3H4 446 aa7.15□□□□□ -1.26
SCARNA16.2-201ENST00000516520 SEMA3EO15041 775 aa7.14□□□□□ -1.27
SCARNA16.2-201ENST00000516520 RGS20O76081 388 aa7.14□□□□□ -1.27
SCARNA16.2-201ENST00000516520 A0A0G2JS52 829 aa7.13□□□□□ -1.27
SCARNA16.2-201ENST00000516520 NUTM2FA1L443 756 aa7.13□□□□□ -1.27
SCARNA16.2-201ENST00000516520 C3orf80F5H4A9 247 aa7.13□□□□□ -1.27
SCARNA16.2-201ENST00000516520 SLC4A3P48751 1232 aa7.13□□□□□ -1.27
SCARNA16.2-201ENST00000516520 FCHSD2O94868 740 aa7.12□□□□□ -1.27
SCARNA16.2-201ENST00000516520 KCNC4Q03721 635 aa7.12□□□□□ -1.27
SCARNA16.2-201ENST00000516520 TESPA1A2RU30 521 aaPredicted RBP7.11□□□□□ -1.27
SCARNA16.2-201ENST00000516520 RNF40O75150 1001 aa7.11□□□□□ -1.27
SCARNA16.2-201ENST00000516520 SLF2Q8IX21 1173 aa7.11□□□□□ -1.27
SCARNA16.2-201ENST00000516520 RBM46Q8TBY0 533 aaKnown RBP7.11□□□□□ -1.27
SCARNA16.2-201ENST00000516520 EYA1Q99502 592 aa7.1□□□□□ -1.27
SCARNA16.2-201ENST00000516520 SWT1Q5T5J6 900 aaKnown RBP7.09□□□□□ -1.27
SCARNA16.2-201ENST00000516520 DNAJB2P25686 324 aa7.08□□□□□ -1.28
SCARNA16.2-201ENST00000516520 HIC1Q14526 733 aa7.08□□□□□ -1.28
SCARNA16.2-201ENST00000516520 VSIG10Q8N0Z9 540 aa7.08□□□□□ -1.28
SCARNA16.2-201ENST00000516520 ADGRG1Q9Y653 693 aa7.08□□□□□ -1.28
SCARNA16.2-201ENST00000516520 PRR14Q9BWN1 585 aa7.07□□□□□ -1.28
SCARNA16.2-201ENST00000516520 KDM2AQ9Y2K7 1162 aa7.07□□□□□ -1.28
SCARNA16.2-201ENST00000516520 IL21Q9HBE4 155 aa7.06□□□□□ -1.28
SCARNA16.2-201ENST00000516520 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
SCARNA16.2-201ENST00000516520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.04□□□□□ -1.28
SCARNA16.2-201ENST00000516520 OATP04181 439 aa7.04□□□□□ -1.28
SCARNA16.2-201ENST00000516520 APLP1P51693 650 aa7.04□□□□□ -1.28
SCARNA16.2-201ENST00000516520 TJAP1Q5JTD0 557 aa7.04□□□□□ -1.28
SCARNA16.2-201ENST00000516520 MTRQ99707 1265 aa7.04□□□□□ -1.28
SCARNA16.2-201ENST00000516520 TMEM134Q9H6X4 195 aa7.04□□□□□ -1.28
SCARNA16.2-201ENST00000516520 RCCD1A6NED2 376 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms