RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 PTPN5P54829 565 aa6.08□□□□□ -1.44
SNORA40.9-201ENST00000515895 RBM33Q96EV2 1170 aaKnown RBP6.08□□□□□ -1.44
SNORA40.9-201ENST00000515895 FBXW7Q969H0 707 aa6.07□□□□□ -1.44
SNORA40.9-201ENST00000515895 PLA2G2EQ9NZK7 142 aa6.07□□□□□ -1.44
SNORA40.9-201ENST00000515895 PDIA6Q15084 440 aa6.06□□□□□ -1.44
SNORA40.9-201ENST00000515895 E2F4Q16254 413 aa6.06□□□□□ -1.44
SNORA40.9-201ENST00000515895 C6orf132Q5T0Z8 1188 aa6.06□□□□□ -1.44
SNORA40.9-201ENST00000515895 MRPL50Q8N5N7 158 aaKnown RBP6.06□□□□□ -1.44
SNORA40.9-201ENST00000515895 WDR70Q9NW82 654 aa6.06□□□□□ -1.44
SNORA40.9-201ENST00000515895 GOLGA8CPA6NN73 597 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 NBR1Q14596 966 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 THSD4Q6ZMP0 1018 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 WNT2BQ93097 391 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 EPAS1Q99814 870 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 NBPF3Q9H094 633 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 TSHZ2Q9NRE2 1034 aa6.05□□□□□ -1.44
SNORA40.9-201ENST00000515895 TSR1Q2NL82 804 aaKnown RBP6.04□□□□□ -1.44
SNORA40.9-201ENST00000515895 PRIM1P49642 420 aaKnown RBP6.03□□□□□ -1.44
SNORA40.9-201ENST00000515895 PLCB2Q00722 1185 aa6.03□□□□□ -1.44
SNORA40.9-201ENST00000515895 KIAA1468Q9P260 1216 aa6.03□□□□□ -1.44
SNORA40.9-201ENST00000515895 SEPT9Q9UHD8 586 aaPredicted RBP6.03□□□□□ -1.44
SNORA40.9-201ENST00000515895 RABGEF1Q9UJ41 708 aa6.03□□□□□ -1.44
SNORA40.9-201ENST00000515895 GRXCR2A6NFK2 248 aa6.02□□□□□ -1.45
SNORA40.9-201ENST00000515895 MAP3K7O43318 606 aa6.02□□□□□ -1.45
SNORA40.9-201ENST00000515895 EN1Q05925 392 aaPredicted RBP6.02□□□□□ -1.45
SNORA40.9-201ENST00000515895 SPDYE16A6NNV3 312 aaPredicted RBP6.01□□□□□ -1.45
SNORA40.9-201ENST00000515895 TRIM6-TRIM34B2RNG4 842 aa6□□□□□ -1.45
SNORA40.9-201ENST00000515895 BCAMP50895 628 aa6□□□□□ -1.45
SNORA40.9-201ENST00000515895 ANKK1Q8NFD2 765 aa5.99□□□□□ -1.45
SNORA40.9-201ENST00000515895 ARIH1Q9Y4X5 557 aaPredicted RBP5.99□□□□□ -1.45
SNORA40.9-201ENST00000515895 ZFRQ96KR1 1074 aaKnown RBP5.98□□□□□ -1.45
SNORA40.9-201ENST00000515895 CDHR5Q9HBB8 845 aa5.98□□□□□ -1.45
SNORA40.9-201ENST00000515895 TSKSQ9UJT2 592 aa5.98□□□□□ -1.45
SNORA40.9-201ENST00000515895 LAPTM4BQ86VI4 370 aa5.97□□□□□ -1.45
SNORA40.9-201ENST00000515895 C3orf80F5H4A9 247 aa5.96□□□□□ -1.46
SNORA40.9-201ENST00000515895 SMAPO00193 183 aa5.96□□□□□ -1.46
SNORA40.9-201ENST00000515895 ONECUT3O60422 494 aaPredicted RBP5.96□□□□□ -1.46
SNORA40.9-201ENST00000515895 OSBPP22059 807 aa5.96□□□□□ -1.46
SNORA40.9-201ENST00000515895 FAM198AQ9UFP1 575 aa5.96□□□□□ -1.46
SNORA40.9-201ENST00000515895 SOWAHBA6NEL2 793 aa5.95□□□□□ -1.46
SNORA40.9-201ENST00000515895 FAM98CQ17RN3 349 aaKnown RBP5.95□□□□□ -1.46
SNORA40.9-201ENST00000515895 KCNV2Q8TDN2 545 aa5.95□□□□□ -1.46
SNORA40.9-201ENST00000515895 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
SNORA40.9-201ENST00000515895 HAP1P54257 671 aaPredicted RBP5.94□□□□□ -1.46
SNORA40.9-201ENST00000515895 WBP1LQ9NX94 342 aa5.94□□□□□ -1.46
SNORA40.9-201ENST00000515895 MLLT3P42568 568 aaPredicted RBP5.93□□□□□ -1.46
SNORA40.9-201ENST00000515895 PRSS12P56730 875 aa5.93□□□□□ -1.46
SNORA40.9-201ENST00000515895 PACS2Q86VP3 889 aa5.93□□□□□ -1.46
SNORA40.9-201ENST00000515895 P3H3Q8IVL6 736 aa5.93□□□□□ -1.46
SNORA40.9-201ENST00000515895 ARHGEF1Q92888 912 aaKnown RBP5.93□□□□□ -1.46
SNORA40.9-201ENST00000515895 LRCH3Q96II8 777 aa5.92□□□□□ -1.46
SNORA40.9-201ENST00000515895 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.9-201ENST00000515895 HPS5Q9UPZ3 1129 aa5.92□□□□□ -1.46
SNORA40.9-201ENST00000515895 PNMA3Q9UL41 463 aa5.91□□□□□ -1.46
SNORA40.9-201ENST00000515895 NUDT18Q6ZVK8 323 aa5.9□□□□□ -1.46
SNORA40.9-201ENST00000515895 SAMD7Q7Z3H4 446 aa5.9□□□□□ -1.46
SNORA40.9-201ENST00000515895 CERKQ8TCT0 537 aa5.9□□□□□ -1.46
SNORA40.9-201ENST00000515895 TATDN2Q93075 761 aa5.9□□□□□ -1.46
SNORA40.9-201ENST00000515895 NPDC1Q9NQX5 325 aaPredicted RBP5.9□□□□□ -1.46
SNORA40.9-201ENST00000515895 A0A0G2JS52 829 aa5.89□□□□□ -1.47
SNORA40.9-201ENST00000515895 NBPF26B4DH59 902 aa5.89□□□□□ -1.47
SNORA40.9-201ENST00000515895 IFFO2Q5TF58 517 aa5.89□□□□□ -1.47
SNORA40.9-201ENST00000515895 PADI6Q6TGC4 694 aa5.89□□□□□ -1.47
SNORA40.9-201ENST00000515895 TSR3Q9UJK0 312 aaKnown RBP5.89□□□□□ -1.47
SNORA40.9-201ENST00000515895 ITGBL1O95965 494 aaPredicted RBP5.88□□□□□ -1.47
SNORA40.9-201ENST00000515895 RNF40O75150 1001 aa5.87□□□□□ -1.47
SNORA40.9-201ENST00000515895 PPP4CP60510 307 aa5.86□□□□□ -1.47
SNORA40.9-201ENST00000515895 NYAP1Q6ZVC0 841 aa5.86□□□□□ -1.47
SNORA40.9-201ENST00000515895 TTC13Q8NBP0 860 aa5.86□□□□□ -1.47
SNORA40.9-201ENST00000515895 RBM27Q9P2N5 1060 aaKnown RBP5.86□□□□□ -1.47
SNORA40.9-201ENST00000515895 SEMA3EO15041 775 aa5.85□□□□□ -1.47
SNORA40.9-201ENST00000515895 KDM2AQ9Y2K7 1162 aa5.85□□□□□ -1.47
SNORA40.9-201ENST00000515895 KCNC4Q03721 635 aa5.84□□□□□ -1.47
SNORA40.9-201ENST00000515895 SWT1Q5T5J6 900 aaKnown RBP5.84□□□□□ -1.47
SNORA40.9-201ENST00000515895 VSIG10Q8N0Z9 540 aa5.84□□□□□ -1.47
SNORA40.9-201ENST00000515895 PTGDRQ13258 359 aa5.83□□□□□ -1.48
SNORA40.9-201ENST00000515895 NUTM2FA1L443 756 aa5.82□□□□□ -1.48
SNORA40.9-201ENST00000515895 FAM161AQ3B820 660 aa5.82□□□□□ -1.48
SNORA40.9-201ENST00000515895 APLP1P51693 650 aa5.81□□□□□ -1.48
SNORA40.9-201ENST00000515895 TJAP1Q5JTD0 557 aa5.81□□□□□ -1.48
SNORA40.9-201ENST00000515895 EYA1Q99502 592 aa5.81□□□□□ -1.48
SNORA40.9-201ENST00000515895 MTRQ99707 1265 aa5.81□□□□□ -1.48
SNORA40.9-201ENST00000515895 RGS20O76081 388 aa5.8□□□□□ -1.48
SNORA40.9-201ENST00000515895 HDGFP51858 240 aaKnown RBP5.8□□□□□ -1.48
SNORA40.9-201ENST00000515895 TESPA1A2RU30 521 aaPredicted RBP5.79□□□□□ -1.48
SNORA40.9-201ENST00000515895 ZNF516Q92618 1163 aa5.79□□□□□ -1.48
SNORA40.9-201ENST00000515895 RBM26Q5T8P6 1007 aaKnown RBP5.78□□□□□ -1.48
SNORA40.9-201ENST00000515895 SLF2Q8IX21 1173 aa5.78□□□□□ -1.48
SNORA40.9-201ENST00000515895 IRX2Q9BZI1 471 aaPredicted RBP5.78□□□□□ -1.48
SNORA40.9-201ENST00000515895 IL21Q9HBE4 155 aa5.78□□□□□ -1.48
SNORA40.9-201ENST00000515895 ADGRG1Q9Y653 693 aa5.78□□□□□ -1.48
SNORA40.9-201ENST00000515895 COPS2P61201 443 aa5.77□□□□□ -1.49
SNORA40.9-201ENST00000515895 SMYD5Q6GMV2 418 aa5.77□□□□□ -1.49
SNORA40.9-201ENST00000515895 NKX2-3Q8TAU0 364 aa5.77□□□□□ -1.49
SNORA40.9-201ENST00000515895 FCHSD2O94868 740 aa5.76□□□□□ -1.49
SNORA40.9-201ENST00000515895 DNAJB2P25686 324 aa5.76□□□□□ -1.49
SNORA40.9-201ENST00000515895 RBM46Q8TBY0 533 aaKnown RBP5.76□□□□□ -1.49
SNORA40.9-201ENST00000515895 RCCD1A6NED2 376 aa5.75□□□□□ -1.49
SNORA40.9-201ENST00000515895 PPP1R18Q6NYC8 613 aa5.75□□□□□ -1.49
SNORA40.9-201ENST00000515895 TMEM134Q9H6X4 195 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms