RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 FBXW7Q969H0 707 aa8.42□□□□□ -1.06
HMGCR-213ENST00000515776 NBPF3Q9H094 633 aa8.41□□□□□ -1.06
HMGCR-213ENST00000515776 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-213ENST00000515776 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
HMGCR-213ENST00000515776 DDX12PQ92771 950 aa8.39□□□□□ -1.07
HMGCR-213ENST00000515776 RTN4Q9NQC3 1192 aaKnown RBP8.39□□□□□ -1.07
HMGCR-213ENST00000515776 RABGEF1Q9UJ41 708 aa8.39□□□□□ -1.07
HMGCR-213ENST00000515776 C6orf132Q5T0Z8 1188 aa8.38□□□□□ -1.07
HMGCR-213ENST00000515776 EPAS1Q99814 870 aa8.38□□□□□ -1.07
HMGCR-213ENST00000515776 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
HMGCR-213ENST00000515776 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
HMGCR-213ENST00000515776 KIAA1468Q9P260 1216 aa8.36□□□□□ -1.07
HMGCR-213ENST00000515776 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
HMGCR-213ENST00000515776 ANKK1Q8NFD2 765 aa8.33□□□□□ -1.08
HMGCR-213ENST00000515776 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
HMGCR-213ENST00000515776 BCAMP50895 628 aa8.31□□□□□ -1.08
HMGCR-213ENST00000515776 NBR1Q14596 966 aa8.31□□□□□ -1.08
HMGCR-213ENST00000515776 PDIA6Q15084 440 aa8.31□□□□□ -1.08
HMGCR-213ENST00000515776 E2F4Q16254 413 aa8.31□□□□□ -1.08
HMGCR-213ENST00000515776 LAPTM4BQ86VI4 370 aa8.31□□□□□ -1.08
HMGCR-213ENST00000515776 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
HMGCR-213ENST00000515776 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
HMGCR-213ENST00000515776 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
HMGCR-213ENST00000515776 SPDYE16A6NNV3 312 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-213ENST00000515776 TRIM6-TRIM34B2RNG4 842 aa8.3□□□□□ -1.08
HMGCR-213ENST00000515776 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
HMGCR-213ENST00000515776 TSR1Q2NL82 804 aaKnown RBP8.3□□□□□ -1.08
HMGCR-213ENST00000515776 SOWAHBA6NEL2 793 aa8.29□□□□□ -1.08
HMGCR-213ENST00000515776 MAP3K7O43318 606 aa8.29□□□□□ -1.08
HMGCR-213ENST00000515776 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
HMGCR-213ENST00000515776 GRXCR2A6NFK2 248 aa8.26□□□□□ -1.09
HMGCR-213ENST00000515776 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
HMGCR-213ENST00000515776 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
HMGCR-213ENST00000515776 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
HMGCR-213ENST00000515776 PACS2Q86VP3 889 aa8.25□□□□□ -1.09
HMGCR-213ENST00000515776 WBP1LQ9NX94 342 aa8.25□□□□□ -1.09
HMGCR-213ENST00000515776 ARIH1Q9Y4X5 557 aaPredicted RBP8.25□□□□□ -1.09
HMGCR-213ENST00000515776 A0A0G2JS52 829 aa8.24□□□□□ -1.09
HMGCR-213ENST00000515776 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
HMGCR-213ENST00000515776 LRCH3Q96II8 777 aa8.22□□□□□ -1.09
HMGCR-213ENST00000515776 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.22□□□□□ -1.09
HMGCR-213ENST00000515776 RGS20O76081 388 aa8.21□□□□□ -1.1
HMGCR-213ENST00000515776 ITGBL1O95965 494 aaPredicted RBP8.21□□□□□ -1.1
HMGCR-213ENST00000515776 PRSS12P56730 875 aa8.21□□□□□ -1.1
HMGCR-213ENST00000515776 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.1
HMGCR-213ENST00000515776 FAM198AQ9UFP1 575 aa8.21□□□□□ -1.1
HMGCR-213ENST00000515776 TSR3Q9UJK0 312 aaKnown RBP8.21□□□□□ -1.1
HMGCR-213ENST00000515776 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
HMGCR-213ENST00000515776 SMAPO00193 183 aa8.2□□□□□ -1.1
HMGCR-213ENST00000515776 OSBPP22059 807 aa8.2□□□□□ -1.1
HMGCR-213ENST00000515776 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
HMGCR-213ENST00000515776 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
HMGCR-213ENST00000515776 CDHR5Q9HBB8 845 aa8.18□□□□□ -1.1
HMGCR-213ENST00000515776 KCNC4Q03721 635 aa8.17□□□□□ -1.1
HMGCR-213ENST00000515776 TATDN2Q93075 761 aa8.17□□□□□ -1.1
HMGCR-213ENST00000515776 PPP4CP60510 307 aa8.16□□□□□ -1.1
HMGCR-213ENST00000515776 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
HMGCR-213ENST00000515776 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
HMGCR-213ENST00000515776 PNMA3Q9UL41 463 aa8.16□□□□□ -1.1
HMGCR-213ENST00000515776 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
HMGCR-213ENST00000515776 NBPF26B4DH59 902 aa8.13□□□□□ -1.11
HMGCR-213ENST00000515776 IRX2Q9BZI1 471 aaPredicted RBP8.13□□□□□ -1.11
HMGCR-213ENST00000515776 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
HMGCR-213ENST00000515776 HDGFP51858 240 aaKnown RBP8.1□□□□□ -1.11
HMGCR-213ENST00000515776 PADI6Q6TGC4 694 aa8.1□□□□□ -1.11
HMGCR-213ENST00000515776 ARHGEF1Q92888 912 aaKnown RBP8.1□□□□□ -1.11
HMGCR-213ENST00000515776 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
HMGCR-213ENST00000515776 MLLT3P42568 568 aaPredicted RBP8.09□□□□□ -1.11
HMGCR-213ENST00000515776 RNF40O75150 1001 aa8.08□□□□□ -1.12
HMGCR-213ENST00000515776 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
HMGCR-213ENST00000515776 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
HMGCR-213ENST00000515776 KCNV2Q8TDN2 545 aa8.08□□□□□ -1.12
HMGCR-213ENST00000515776 APLP1P51693 650 aa8.05□□□□□ -1.12
HMGCR-213ENST00000515776 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
HMGCR-213ENST00000515776 MTRQ99707 1265 aa8.05□□□□□ -1.12
HMGCR-213ENST00000515776 EYA1Q99502 592 aa8.04□□□□□ -1.12
HMGCR-213ENST00000515776 IL21Q9HBE4 155 aa8.04□□□□□ -1.12
HMGCR-213ENST00000515776 ZNF516Q92618 1163 aa8.03□□□□□ -1.12
HMGCR-213ENST00000515776 PTGDRQ13258 359 aa8.01□□□□□ -1.13
HMGCR-213ENST00000515776 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
HMGCR-213ENST00000515776 PPP1R18Q6NYC8 613 aa8□□□□□ -1.13
HMGCR-213ENST00000515776 NUTM2FA1L443 756 aa7.99□□□□□ -1.13
HMGCR-213ENST00000515776 NECTIN2Q92692 538 aa7.99□□□□□ -1.13
HMGCR-213ENST00000515776 COPS2P61201 443 aa7.98□□□□□ -1.13
HMGCR-213ENST00000515776 Q6ZNB5 142 aa7.98□□□□□ -1.13
HMGCR-213ENST00000515776 NKX2-3Q8TAU0 364 aa7.98□□□□□ -1.13
HMGCR-213ENST00000515776 SEMA3EO15041 775 aa7.97□□□□□ -1.13
HMGCR-213ENST00000515776 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
HMGCR-213ENST00000515776 PRKD2Q9BZL6 878 aa7.97□□□□□ -1.13
HMGCR-213ENST00000515776 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.97□□□□□ -1.13
HMGCR-213ENST00000515776 FAM161AQ3B820 660 aa7.96□□□□□ -1.14
HMGCR-213ENST00000515776 P3H3Q8IVL6 736 aa7.96□□□□□ -1.14
HMGCR-213ENST00000515776 RBM46Q8TBY0 533 aaKnown RBP7.96□□□□□ -1.14
HMGCR-213ENST00000515776 ADGRG1Q9Y653 693 aa7.95□□□□□ -1.14
HMGCR-213ENST00000515776 GFRA3O60609 400 aa7.94□□□□□ -1.14
HMGCR-213ENST00000515776 DNAJB2P25686 324 aa7.94□□□□□ -1.14
HMGCR-213ENST00000515776 RCCD1A6NED2 376 aa7.93□□□□□ -1.14
HMGCR-213ENST00000515776 ZPR1O75312 459 aa7.93□□□□□ -1.14
HMGCR-213ENST00000515776 TMEM134Q9H6X4 195 aa7.93□□□□□ -1.14
HMGCR-213ENST00000515776 FCHSD2O94868 740 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms