RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
SUB1-213ENST00000515355 ZMYM3Q14202 1370 aa17.55■□□□□ 0.4
SUB1-213ENST00000515355 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
SUB1-213ENST00000515355 HSPA2P54652 639 aa17.55■□□□□ 0.4
SUB1-213ENST00000515355 SHANK2Q9UPX8 1470 aa17.54■□□□□ 0.4
SUB1-213ENST00000515355 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.39
SUB1-213ENST00000515355 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
SUB1-213ENST00000515355 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
SUB1-213ENST00000515355 CLTCQ00610 1675 aaKnown RBP17.49■□□□□ 0.39
SUB1-213ENST00000515355 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
SUB1-213ENST00000515355 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
SUB1-213ENST00000515355 C3P01024 1663 aa17.46■□□□□ 0.39
SUB1-213ENST00000515355 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
SUB1-213ENST00000515355 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
SUB1-213ENST00000515355 LMTK3Q96Q04 1460 aa17.45■□□□□ 0.38
SUB1-213ENST00000515355 KANK1Q14678 1352 aa17.44■□□□□ 0.38
SUB1-213ENST00000515355 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
SUB1-213ENST00000515355 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
SUB1-213ENST00000515355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
SUB1-213ENST00000515355 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
SUB1-213ENST00000515355 ADGRL2O95490 1459 aa17.43■□□□□ 0.38
SUB1-213ENST00000515355 EIF2AK4Q9P2K8 1649 aaKnown RBP17.4■□□□□ 0.38
SUB1-213ENST00000515355 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
SUB1-213ENST00000515355 NPATQ14207 1427 aa17.39■□□□□ 0.38
SUB1-213ENST00000515355 MROH2AA6NES4 1674 aa17.39■□□□□ 0.37
SUB1-213ENST00000515355 ABCC3O15438 1527 aa17.38■□□□□ 0.37
SUB1-213ENST00000515355 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
SUB1-213ENST00000515355 TNRQ92752 1358 aa17.38■□□□□ 0.37
SUB1-213ENST00000515355 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
SUB1-213ENST00000515355 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
SUB1-213ENST00000515355 SETD1BQ9UPS6 1966 aaKnown RBP17.36■□□□□ 0.37
SUB1-213ENST00000515355 PZPP20742 1482 aa17.36■□□□□ 0.37
SUB1-213ENST00000515355 MROH1Q8NDA8 1641 aa17.34■□□□□ 0.37
SUB1-213ENST00000515355 FAM135AQ9P2D6 1515 aa17.33■□□□□ 0.37
SUB1-213ENST00000515355 CEP152O94986 1710 aa17.33■□□□□ 0.36
SUB1-213ENST00000515355 PRDM15P57071 1507 aaPredicted RBP17.32■□□□□ 0.36
SUB1-213ENST00000515355 NUP155O75694 1391 aa17.32■□□□□ 0.36
SUB1-213ENST00000515355 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
SUB1-213ENST00000515355 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
SUB1-213ENST00000515355 NCKAP5LQ9HCH0 1330 aa17.3■□□□□ 0.36
SUB1-213ENST00000515355 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
SUB1-213ENST00000515355 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
SUB1-213ENST00000515355 CFAP65Q6ZU64 1925 aaKnown RBP17.29■□□□□ 0.36
SUB1-213ENST00000515355 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
SUB1-213ENST00000515355 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
SUB1-213ENST00000515355 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
SUB1-213ENST00000515355 MYO3AQ8NEV4 1616 aa17.28■□□□□ 0.36
SUB1-213ENST00000515355 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
SUB1-213ENST00000515355 NAIPQ13075 1403 aa17.27■□□□□ 0.35
SUB1-213ENST00000515355 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
SUB1-213ENST00000515355 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
SUB1-213ENST00000515355 ARHGAP31Q2M1Z3 1444 aa17.25■□□□□ 0.35
SUB1-213ENST00000515355 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
SUB1-213ENST00000515355 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
SUB1-213ENST00000515355 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
SUB1-213ENST00000515355 LMTK2Q8IWU2 1503 aa17.22■□□□□ 0.35
SUB1-213ENST00000515355 PKD2Q13563 968 aa17.22■□□□□ 0.35
SUB1-213ENST00000515355 IDI1Q13907 227 aa17.22■□□□□ 0.35
SUB1-213ENST00000515355 ANKLE2Q86XL3 938 aa17.22■□□□□ 0.35
SUB1-213ENST00000515355 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
SUB1-213ENST00000515355 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
SUB1-213ENST00000515355 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
SUB1-213ENST00000515355 UGGT1Q9NYU2 1555 aa17.21■□□□□ 0.35
SUB1-213ENST00000515355 EFCAB6Q5THR3 1501 aa17.2■□□□□ 0.34
SUB1-213ENST00000515355 UNC13BO14795 1591 aa17.19■□□□□ 0.34
SUB1-213ENST00000515355 SLC4A1APQ9BWU0 796 aaKnown RBP17.19■□□□□ 0.34
SUB1-213ENST00000515355 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
SUB1-213ENST00000515355 ZNF142P52746 1687 aaPredicted RBP17.17■□□□□ 0.34
SUB1-213ENST00000515355 STRCQ7RTU9 1775 aa17.17■□□□□ 0.34
SUB1-213ENST00000515355 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
SUB1-213ENST00000515355 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
SUB1-213ENST00000515355 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
SUB1-213ENST00000515355 NOS1P29475 1434 aa17.15■□□□□ 0.34
SUB1-213ENST00000515355 BCANQ96GW7 911 aa17.15■□□□□ 0.34
SUB1-213ENST00000515355 TET3O43151 1660 aa17.15■□□□□ 0.34
SUB1-213ENST00000515355 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
SUB1-213ENST00000515355 GCC2Q8IWJ2 1684 aa17.14■□□□□ 0.33
SUB1-213ENST00000515355 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
SUB1-213ENST00000515355 PTPRTO14522 1441 aa17.13■□□□□ 0.33
SUB1-213ENST00000515355 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
SUB1-213ENST00000515355 LTKP29376 864 aa17.12■□□□□ 0.33
SUB1-213ENST00000515355 SYNMO15061 1565 aa17.11■□□□□ 0.33
SUB1-213ENST00000515355 PIK3C2BO00750 1634 aa17.1■□□□□ 0.33
SUB1-213ENST00000515355 E9PCH4 1651 aa17.1■□□□□ 0.33
SUB1-213ENST00000515355 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
SUB1-213ENST00000515355 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
SUB1-213ENST00000515355 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
SUB1-213ENST00000515355 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
SUB1-213ENST00000515355 CERKQ8TCT0 537 aa17.09■□□□□ 0.33
SUB1-213ENST00000515355 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
SUB1-213ENST00000515355 NPHP4O75161 1426 aaPredicted RBP17.08■□□□□ 0.32
SUB1-213ENST00000515355 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
SUB1-213ENST00000515355 TMEM2Q9UHN6 1383 aa17.08■□□□□ 0.32
SUB1-213ENST00000515355 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
SUB1-213ENST00000515355 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
SUB1-213ENST00000515355 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
SUB1-213ENST00000515355 SLC26A8Q96RN1 970 aa17.04■□□□□ 0.32
SUB1-213ENST00000515355 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
SUB1-213ENST00000515355 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
SUB1-213ENST00000515355 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms