RNA–Protein interactions for RNA: ENST00000515140.1

CENPC-207, Transcript of centromere protein C, humanhuman

TSL 1 (best)

Gene CENPC, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-207ENST00000515140 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
CENPC-207ENST00000515140 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
CENPC-207ENST00000515140 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
CENPC-207ENST00000515140 BHMG1C9JSJ3 638 aaPredicted RBP11.9□□□□□ -0.5
CENPC-207ENST00000515140 ONECUT3O60422 494 aaPredicted RBP11.89□□□□□ -0.51
CENPC-207ENST00000515140 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
CENPC-207ENST00000515140 RABGEF1Q9UJ41 708 aa11.87□□□□□ -0.51
CENPC-207ENST00000515140 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
CENPC-207ENST00000515140 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
CENPC-207ENST00000515140 DDX12PQ92771 950 aa11.85□□□□□ -0.51
CENPC-207ENST00000515140 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
CENPC-207ENST00000515140 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
CENPC-207ENST00000515140 NBR1Q14596 966 aa11.83□□□□□ -0.52
CENPC-207ENST00000515140 COL9A1P20849 921 aa11.82□□□□□ -0.52
CENPC-207ENST00000515140 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
CENPC-207ENST00000515140 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
CENPC-207ENST00000515140 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
CENPC-207ENST00000515140 MAP3K7O43318 606 aa11.79□□□□□ -0.52
CENPC-207ENST00000515140 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
CENPC-207ENST00000515140 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
CENPC-207ENST00000515140 THSD4Q6ZMP0 1018 aa11.78□□□□□ -0.52
CENPC-207ENST00000515140 WNT2BQ93097 391 aa11.78□□□□□ -0.52
CENPC-207ENST00000515140 TRIM6-TRIM34B2RNG4 842 aa11.77□□□□□ -0.53
CENPC-207ENST00000515140 PROX2Q3B8N5 592 aa11.77□□□□□ -0.53
CENPC-207ENST00000515140 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
CENPC-207ENST00000515140 ANKK1Q8NFD2 765 aa11.75□□□□□ -0.53
CENPC-207ENST00000515140 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
CENPC-207ENST00000515140 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
CENPC-207ENST00000515140 PLA2G2EQ9NZK7 142 aa11.73□□□□□ -0.53
CENPC-207ENST00000515140 GRXCR2A6NFK2 248 aa11.72□□□□□ -0.53
CENPC-207ENST00000515140 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
CENPC-207ENST00000515140 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
CENPC-207ENST00000515140 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
CENPC-207ENST00000515140 OSBPP22059 807 aa11.7□□□□□ -0.54
CENPC-207ENST00000515140 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
CENPC-207ENST00000515140 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
CENPC-207ENST00000515140 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
CENPC-207ENST00000515140 PTPN5P54829 565 aa11.68□□□□□ -0.54
CENPC-207ENST00000515140 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
CENPC-207ENST00000515140 PRSS12P56730 875 aa11.67□□□□□ -0.54
CENPC-207ENST00000515140 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
CENPC-207ENST00000515140 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
CENPC-207ENST00000515140 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
CENPC-207ENST00000515140 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
CENPC-207ENST00000515140 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
CENPC-207ENST00000515140 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
CENPC-207ENST00000515140 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
CENPC-207ENST00000515140 LRCH3Q96II8 777 aa11.61□□□□□ -0.55
CENPC-207ENST00000515140 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
CENPC-207ENST00000515140 BCAMP50895 628 aa11.58□□□□□ -0.56
CENPC-207ENST00000515140 CDHR5Q9HBB8 845 aa11.58□□□□□ -0.56
CENPC-207ENST00000515140 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
CENPC-207ENST00000515140 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
CENPC-207ENST00000515140 TATDN2Q93075 761 aa11.56□□□□□ -0.56
CENPC-207ENST00000515140 RGS20O76081 388 aa11.54□□□□□ -0.56
CENPC-207ENST00000515140 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
CENPC-207ENST00000515140 MLLT3P42568 568 aaPredicted RBP11.54□□□□□ -0.56
CENPC-207ENST00000515140 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
CENPC-207ENST00000515140 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
CENPC-207ENST00000515140 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
CENPC-207ENST00000515140 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
CENPC-207ENST00000515140 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
CENPC-207ENST00000515140 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
CENPC-207ENST00000515140 WBP1LQ9NX94 342 aa11.51□□□□□ -0.57
CENPC-207ENST00000515140 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
CENPC-207ENST00000515140 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
CENPC-207ENST00000515140 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
CENPC-207ENST00000515140 SMAPO00193 183 aa11.48□□□□□ -0.57
CENPC-207ENST00000515140 HAP1P54257 671 aaPredicted RBP11.48□□□□□ -0.57
CENPC-207ENST00000515140 PPP4CP60510 307 aa11.48□□□□□ -0.57
CENPC-207ENST00000515140 PTGDRQ13258 359 aa11.48□□□□□ -0.57
CENPC-207ENST00000515140 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
CENPC-207ENST00000515140 A0A0G2JS52 829 aa11.47□□□□□ -0.57
CENPC-207ENST00000515140 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
CENPC-207ENST00000515140 SEMA3EO15041 775 aa11.45□□□□□ -0.58
CENPC-207ENST00000515140 FCHSD2O94868 740 aa11.45□□□□□ -0.58
CENPC-207ENST00000515140 SLF2Q8IX21 1173 aa11.44□□□□□ -0.58
CENPC-207ENST00000515140 TESPA1A2RU30 521 aaPredicted RBP11.43□□□□□ -0.58
CENPC-207ENST00000515140 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
CENPC-207ENST00000515140 KCNC4Q03721 635 aa11.43□□□□□ -0.58
CENPC-207ENST00000515140 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
CENPC-207ENST00000515140 EYA1Q99502 592 aa11.42□□□□□ -0.58
CENPC-207ENST00000515140 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
CENPC-207ENST00000515140 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
CENPC-207ENST00000515140 DNAJB2P25686 324 aa11.38□□□□□ -0.59
CENPC-207ENST00000515140 PRR14Q9BWN1 585 aa11.38□□□□□ -0.59
CENPC-207ENST00000515140 HIC1Q14526 733 aa11.37□□□□□ -0.59
CENPC-207ENST00000515140 SWT1Q5T5J6 900 aaKnown RBP11.37□□□□□ -0.59
CENPC-207ENST00000515140 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
CENPC-207ENST00000515140 RNF40O75150 1001 aa11.36□□□□□ -0.59
CENPC-207ENST00000515140 IL21Q9HBE4 155 aa11.34□□□□□ -0.59
CENPC-207ENST00000515140 OATP04181 439 aa11.33□□□□□ -0.6
CENPC-207ENST00000515140 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
CENPC-207ENST00000515140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
CENPC-207ENST00000515140 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
CENPC-207ENST00000515140 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
CENPC-207ENST00000515140 MTRQ99707 1265 aa11.31□□□□□ -0.6
CENPC-207ENST00000515140 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
CENPC-207ENST00000515140 APLP1P51693 650 aa11.29□□□□□ -0.6
CENPC-207ENST00000515140 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms