RNA–Protein interactions for RNA: ENST00000514418.1

SEC24D-213, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 3

Gene SEC24D, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-213ENST00000514418 NBR1Q14596 966 aa9.4□□□□□ -0.9
SEC24D-213ENST00000514418 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
SEC24D-213ENST00000514418 PTPREP23469 700 aa9.39□□□□□ -0.91
SEC24D-213ENST00000514418 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
SEC24D-213ENST00000514418 VPS9D1Q9Y2B5 631 aa9.39□□□□□ -0.91
SEC24D-213ENST00000514418 EPAS1Q99814 870 aa9.38□□□□□ -0.91
SEC24D-213ENST00000514418 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
SEC24D-213ENST00000514418 KCNV2Q8TDN2 545 aa9.36□□□□□ -0.91
SEC24D-213ENST00000514418 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
SEC24D-213ENST00000514418 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
SEC24D-213ENST00000514418 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
SEC24D-213ENST00000514418 DDX12PQ92771 950 aa9.34□□□□□ -0.91
SEC24D-213ENST00000514418 COL9A1P20849 921 aa9.33□□□□□ -0.92
SEC24D-213ENST00000514418 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
SEC24D-213ENST00000514418 PRIM1P49642 420 aaKnown RBP9.32□□□□□ -0.92
SEC24D-213ENST00000514418 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
SEC24D-213ENST00000514418 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
SEC24D-213ENST00000514418 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
SEC24D-213ENST00000514418 OSBPP22059 807 aa9.27□□□□□ -0.93
SEC24D-213ENST00000514418 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
SEC24D-213ENST00000514418 TSR1Q2NL82 804 aaKnown RBP9.26□□□□□ -0.93
SEC24D-213ENST00000514418 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
SEC24D-213ENST00000514418 RABGEF1Q9UJ41 708 aa9.26□□□□□ -0.93
SEC24D-213ENST00000514418 GRXCR2A6NFK2 248 aa9.23□□□□□ -0.93
SEC24D-213ENST00000514418 MAP3K7O43318 606 aa9.23□□□□□ -0.93
SEC24D-213ENST00000514418 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
SEC24D-213ENST00000514418 HCSTQ9UBK5 93 aa9.22□□□□□ -0.93
SEC24D-213ENST00000514418 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
SEC24D-213ENST00000514418 NBPF3Q9H094 633 aa9.21□□□□□ -0.94
SEC24D-213ENST00000514418 MLLT3P42568 568 aaPredicted RBP9.2□□□□□ -0.94
SEC24D-213ENST00000514418 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
SEC24D-213ENST00000514418 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
SEC24D-213ENST00000514418 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
SEC24D-213ENST00000514418 SEMA3EO15041 775 aa9.19□□□□□ -0.94
SEC24D-213ENST00000514418 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
SEC24D-213ENST00000514418 STAC3Q96MF2 364 aa9.19□□□□□ -0.94
SEC24D-213ENST00000514418 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
SEC24D-213ENST00000514418 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
SEC24D-213ENST00000514418 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
SEC24D-213ENST00000514418 CDHR5Q9HBB8 845 aa9.18□□□□□ -0.94
SEC24D-213ENST00000514418 NPDC1Q9NQX5 325 aaPredicted RBP9.18□□□□□ -0.94
SEC24D-213ENST00000514418 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
SEC24D-213ENST00000514418 PRSS12P56730 875 aa9.16□□□□□ -0.94
SEC24D-213ENST00000514418 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
SEC24D-213ENST00000514418 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
SEC24D-213ENST00000514418 SMYD5Q6GMV2 418 aa9.15□□□□□ -0.94
SEC24D-213ENST00000514418 RBM27Q9P2N5 1060 aaKnown RBP9.15□□□□□ -0.94
SEC24D-213ENST00000514418 WNT2BQ93097 391 aa9.14□□□□□ -0.95
SEC24D-213ENST00000514418 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
SEC24D-213ENST00000514418 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
SEC24D-213ENST00000514418 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
SEC24D-213ENST00000514418 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
SEC24D-213ENST00000514418 TESPA1A2RU30 521 aaPredicted RBP9.11□□□□□ -0.95
SEC24D-213ENST00000514418 GOLGA8CPA6NN73 597 aa9.11□□□□□ -0.95
SEC24D-213ENST00000514418 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
SEC24D-213ENST00000514418 SOWAHBA6NEL2 793 aa9.1□□□□□ -0.95
SEC24D-213ENST00000514418 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
SEC24D-213ENST00000514418 PTPN5P54829 565 aa9.09□□□□□ -0.95
SEC24D-213ENST00000514418 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
SEC24D-213ENST00000514418 PTGDRQ13258 359 aa9.08□□□□□ -0.96
SEC24D-213ENST00000514418 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
SEC24D-213ENST00000514418 BCAMP50895 628 aa9.07□□□□□ -0.96
SEC24D-213ENST00000514418 TATDN2Q93075 761 aa9.07□□□□□ -0.96
SEC24D-213ENST00000514418 SMAPO00193 183 aa9.06□□□□□ -0.96
SEC24D-213ENST00000514418 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
SEC24D-213ENST00000514418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
SEC24D-213ENST00000514418 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
SEC24D-213ENST00000514418 NBPF26B4DH59 902 aa9.05□□□□□ -0.96
SEC24D-213ENST00000514418 PRKCSHP14314 528 aaPredicted RBP9.03□□□□□ -0.96
SEC24D-213ENST00000514418 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
SEC24D-213ENST00000514418 NUDT18Q6ZVK8 323 aa9.03□□□□□ -0.96
SEC24D-213ENST00000514418 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
SEC24D-213ENST00000514418 EYA1Q99502 592 aa9.02□□□□□ -0.97
SEC24D-213ENST00000514418 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
SEC24D-213ENST00000514418 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
SEC24D-213ENST00000514418 RBM26Q5T8P6 1007 aaKnown RBP9.01□□□□□ -0.97
SEC24D-213ENST00000514418 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
SEC24D-213ENST00000514418 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
SEC24D-213ENST00000514418 GPR37O15354 613 aa9□□□□□ -0.97
SEC24D-213ENST00000514418 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
SEC24D-213ENST00000514418 TSR3Q9UJK0 312 aaKnown RBP9□□□□□ -0.97
SEC24D-213ENST00000514418 GPIHBP1Q8IV16 184 aa8.99□□□□□ -0.97
SEC24D-213ENST00000514418 NUTM2FA1L443 756 aa8.98□□□□□ -0.97
SEC24D-213ENST00000514418 FCHSD2O94868 740 aa8.98□□□□□ -0.97
SEC24D-213ENST00000514418 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
SEC24D-213ENST00000514418 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
SEC24D-213ENST00000514418 ADGRG1Q9Y653 693 aa8.98□□□□□ -0.97
SEC24D-213ENST00000514418 HIC1Q14526 733 aa8.94□□□□□ -0.98
SEC24D-213ENST00000514418 ZC3H15Q8WU90 426 aaKnown RBP8.94□□□□□ -0.98
SEC24D-213ENST00000514418 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
SEC24D-213ENST00000514418 PPP4CP60510 307 aa8.92□□□□□ -0.98
SEC24D-213ENST00000514418 FAM161AQ3B820 660 aa8.91□□□□□ -0.98
SEC24D-213ENST00000514418 RBM46Q8TBY0 533 aaKnown RBP8.91□□□□□ -0.98
SEC24D-213ENST00000514418 TMEM134Q9H6X4 195 aa8.91□□□□□ -0.98
SEC24D-213ENST00000514418 GNPATO15228 680 aa8.9□□□□□ -0.98
SEC24D-213ENST00000514418 FECHP22830 423 aa8.9□□□□□ -0.98
SEC24D-213ENST00000514418 DNAJB2P25686 324 aa8.9□□□□□ -0.98
SEC24D-213ENST00000514418 A0A0G2JS52 829 aa8.89□□□□□ -0.99
SEC24D-213ENST00000514418 RCCD1A6NED2 376 aa8.89□□□□□ -0.99
SEC24D-213ENST00000514418 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms