RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 ITGAEP38570 1179 aa17.91■□□□□ 0.46
TRIM23-207ENST00000513794 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
TRIM23-207ENST00000513794 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
TRIM23-207ENST00000513794 ABCC5O15440 1437 aa17.9■□□□□ 0.46
TRIM23-207ENST00000513794 PTPN23Q9H3S7 1636 aa17.9■□□□□ 0.46
TRIM23-207ENST00000513794 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
TRIM23-207ENST00000513794 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
TRIM23-207ENST00000513794 HSPA2P54652 639 aa17.87■□□□□ 0.45
TRIM23-207ENST00000513794 WASHC2CQ9Y4E1 1318 aa17.87■□□□□ 0.45
TRIM23-207ENST00000513794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRIM23-207ENST00000513794 DAPK1P53355 1430 aa17.86■□□□□ 0.45
TRIM23-207ENST00000513794 TCOF1Q13428 1488 aaKnown RBP17.86■□□□□ 0.45
TRIM23-207ENST00000513794 FER1L4A9Z1Z3 1794 aa17.85■□□□□ 0.45
TRIM23-207ENST00000513794 CNTLNQ9NXG0 1405 aa17.83■□□□□ 0.45
TRIM23-207ENST00000513794 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
TRIM23-207ENST00000513794 SOCS7O14512 581 aa17.83■□□□□ 0.44
TRIM23-207ENST00000513794 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.44
TRIM23-207ENST00000513794 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
TRIM23-207ENST00000513794 PLXNC1O60486 1568 aa17.8■□□□□ 0.44
TRIM23-207ENST00000513794 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
TRIM23-207ENST00000513794 MAST1Q9Y2H9 1570 aa17.79■□□□□ 0.44
TRIM23-207ENST00000513794 NCOA1Q15788 1441 aa17.77■□□□□ 0.44
TRIM23-207ENST00000513794 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
TRIM23-207ENST00000513794 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
TRIM23-207ENST00000513794 DUOX2Q9NRD8 1548 aa17.75■□□□□ 0.43
TRIM23-207ENST00000513794 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
TRIM23-207ENST00000513794 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
TRIM23-207ENST00000513794 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
TRIM23-207ENST00000513794 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
TRIM23-207ENST00000513794 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
TRIM23-207ENST00000513794 C3P01024 1663 aa17.71■□□□□ 0.43
TRIM23-207ENST00000513794 KANK1Q14678 1352 aa17.7■□□□□ 0.42
TRIM23-207ENST00000513794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.69■□□□□ 0.42
TRIM23-207ENST00000513794 NPATQ14207 1427 aa17.69■□□□□ 0.42
TRIM23-207ENST00000513794 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
TRIM23-207ENST00000513794 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
TRIM23-207ENST00000513794 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
TRIM23-207ENST00000513794 ADGRL2O95490 1459 aa17.66■□□□□ 0.42
TRIM23-207ENST00000513794 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
TRIM23-207ENST00000513794 TNRQ92752 1358 aa17.66■□□□□ 0.42
TRIM23-207ENST00000513794 ROCK1Q13464 1354 aa17.65■□□□□ 0.42
TRIM23-207ENST00000513794 MROH2AA6NES4 1674 aa17.64■□□□□ 0.42
TRIM23-207ENST00000513794 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.42
TRIM23-207ENST00000513794 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
TRIM23-207ENST00000513794 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
TRIM23-207ENST00000513794 EIF2AK4Q9P2K8 1649 aaKnown RBP17.62■□□□□ 0.41
TRIM23-207ENST00000513794 PZPP20742 1482 aa17.62■□□□□ 0.41
TRIM23-207ENST00000513794 ABCC3O15438 1527 aa17.62■□□□□ 0.41
TRIM23-207ENST00000513794 PREX1Q8TCU6 1659 aa17.61■□□□□ 0.41
TRIM23-207ENST00000513794 THEMISQ8N1K5 641 aaPredicted RBP17.6■□□□□ 0.41
TRIM23-207ENST00000513794 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
TRIM23-207ENST00000513794 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.41
TRIM23-207ENST00000513794 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
TRIM23-207ENST00000513794 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
TRIM23-207ENST00000513794 NUP155O75694 1391 aa17.57■□□□□ 0.4
TRIM23-207ENST00000513794 CFAP65Q6ZU64 1925 aaKnown RBP17.57■□□□□ 0.4
TRIM23-207ENST00000513794 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
TRIM23-207ENST00000513794 MROH1Q8NDA8 1641 aa17.57■□□□□ 0.4
TRIM23-207ENST00000513794 SPATA31D1Q6ZQQ2 1576 aa17.57■□□□□ 0.4
TRIM23-207ENST00000513794 PKD2Q13563 968 aa17.55■□□□□ 0.4
TRIM23-207ENST00000513794 ANKLE2Q86XL3 938 aa17.55■□□□□ 0.4
TRIM23-207ENST00000513794 IDI1Q13907 227 aa17.54■□□□□ 0.4
TRIM23-207ENST00000513794 A2ML1A8K2U0 1454 aa17.54■□□□□ 0.4
TRIM23-207ENST00000513794 ARHGAP31Q2M1Z3 1444 aa17.54■□□□□ 0.4
TRIM23-207ENST00000513794 CEP152O94986 1710 aa17.53■□□□□ 0.4
TRIM23-207ENST00000513794 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
TRIM23-207ENST00000513794 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
TRIM23-207ENST00000513794 CAMSAP1Q5T5Y3 1602 aa17.52■□□□□ 0.4
TRIM23-207ENST00000513794 CEP170BQ9Y4F5 1589 aaPredicted RBP17.5■□□□□ 0.39
TRIM23-207ENST00000513794 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
TRIM23-207ENST00000513794 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
TRIM23-207ENST00000513794 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
TRIM23-207ENST00000513794 NAIPQ13075 1403 aa17.49■□□□□ 0.39
TRIM23-207ENST00000513794 MYO3AQ8NEV4 1616 aa17.49■□□□□ 0.39
TRIM23-207ENST00000513794 DEPDC5O75140 1603 aa17.48■□□□□ 0.39
TRIM23-207ENST00000513794 TXNDC2Q86VQ3 553 aa17.48■□□□□ 0.39
TRIM23-207ENST00000513794 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
TRIM23-207ENST00000513794 LMTK2Q8IWU2 1503 aa17.47■□□□□ 0.39
TRIM23-207ENST00000513794 VWDEQ8N2E2 1590 aa17.47■□□□□ 0.39
TRIM23-207ENST00000513794 PTPRTO14522 1441 aa17.47■□□□□ 0.39
TRIM23-207ENST00000513794 STRCQ7RTU9 1775 aa17.46■□□□□ 0.39
TRIM23-207ENST00000513794 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
TRIM23-207ENST00000513794 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
TRIM23-207ENST00000513794 BCANQ96GW7 911 aa17.43■□□□□ 0.38
TRIM23-207ENST00000513794 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
TRIM23-207ENST00000513794 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
TRIM23-207ENST00000513794 NOS1P29475 1434 aa17.42■□□□□ 0.38
TRIM23-207ENST00000513794 LTKP29376 864 aa17.42■□□□□ 0.38
TRIM23-207ENST00000513794 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
TRIM23-207ENST00000513794 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
TRIM23-207ENST00000513794 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
TRIM23-207ENST00000513794 EFCAB6Q5THR3 1501 aa17.4■□□□□ 0.38
TRIM23-207ENST00000513794 UNC13BO14795 1591 aa17.4■□□□□ 0.38
TRIM23-207ENST00000513794 RPRD2Q5VT52 1461 aaKnown RBP17.39■□□□□ 0.37
TRIM23-207ENST00000513794 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
TRIM23-207ENST00000513794 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
TRIM23-207ENST00000513794 NUTM2DQ5VT03 806 aaPredicted RBP17.37■□□□□ 0.37
TRIM23-207ENST00000513794 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
TRIM23-207ENST00000513794 TET3O43151 1660 aa17.36■□□□□ 0.37
TRIM23-207ENST00000513794 PPP1R15AO75807 674 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms