RNA–Protein interactions for RNA: ENST00000513398.1

ACTN3-203, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN3, Length 2,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-203ENST00000513398 SHANK2Q9UPX8 1470 aa24.65■■□□□ 1.54
ACTN3-203ENST00000513398 L3MBTL2Q969R5 705 aa24.64■■□□□ 1.54
ACTN3-203ENST00000513398 RGL3Q3MIN7 710 aa24.64■■□□□ 1.53
ACTN3-203ENST00000513398 KDM2AQ9Y2K7 1162 aa24.62■■□□□ 1.53
ACTN3-203ENST00000513398 FANCIQ9NVI1 1328 aa24.6■■□□□ 1.53
ACTN3-203ENST00000513398 ANKRD30BQ9BXX2 1392 aa24.58■■□□□ 1.53
ACTN3-203ENST00000513398 ERICH6Q7L0X2 663 aa24.58■■□□□ 1.52
ACTN3-203ENST00000513398 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
ACTN3-203ENST00000513398 MLECQ14165 292 aa24.55■■□□□ 1.52
ACTN3-203ENST00000513398 ZFYVE16Q7Z3T8 1539 aa24.51■■□□□ 1.51
ACTN3-203ENST00000513398 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
ACTN3-203ENST00000513398 WASHC2AQ641Q2 1341 aa24.49■■□□□ 1.51
ACTN3-203ENST00000513398 HSPA5P11021 654 aaKnown RBP24.49■■□□□ 1.51
ACTN3-203ENST00000513398 ZNF518AQ6AHZ1 1483 aa24.49■■□□□ 1.51
ACTN3-203ENST00000513398 POGZQ7Z3K3 1410 aa24.48■■□□□ 1.51
ACTN3-203ENST00000513398 YEATS2Q9ULM3 1422 aa24.48■■□□□ 1.51
ACTN3-203ENST00000513398 NBPF8Q3BBV2 869 aa24.48■■□□□ 1.51
ACTN3-203ENST00000513398 ARAP3Q8WWN8 1544 aa24.47■■□□□ 1.51
ACTN3-203ENST00000513398 DIP2BQ9P265 1576 aa24.47■■□□□ 1.51
ACTN3-203ENST00000513398 FAM135AQ9P2D6 1515 aa24.46■■□□□ 1.51
ACTN3-203ENST00000513398 DUOX2Q9NRD8 1548 aa24.46■■□□□ 1.51
ACTN3-203ENST00000513398 ERICH6BQ5W0A0 696 aa24.45■■□□□ 1.51
ACTN3-203ENST00000513398 DCAF11Q8TEB1 546 aa24.45■■□□□ 1.51
ACTN3-203ENST00000513398 PPP4R2Q9NY27 417 aa24.45■■□□□ 1.5
ACTN3-203ENST00000513398 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
ACTN3-203ENST00000513398 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
ACTN3-203ENST00000513398 MAST1Q9Y2H9 1570 aa24.42■■□□□ 1.5
ACTN3-203ENST00000513398 RTEL1-TNFRSF6BF6WH68 1400 aa24.41■■□□□ 1.5
ACTN3-203ENST00000513398 CHGAP10645 457 aaKnown RBP24.41■■□□□ 1.5
ACTN3-203ENST00000513398 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.5
ACTN3-203ENST00000513398 COL17A1Q9UMD9 1497 aaPredicted RBP24.39■■□□□ 1.5
ACTN3-203ENST00000513398 CCDC184Q52MB2 194 aa24.39■■□□□ 1.5
ACTN3-203ENST00000513398 ERBINQ96RT1 1412 aa24.39■■□□□ 1.5
ACTN3-203ENST00000513398 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.5
ACTN3-203ENST00000513398 PLXNC1O60486 1568 aa24.39■■□□□ 1.49
ACTN3-203ENST00000513398 WASHC2CQ9Y4E1 1318 aa24.39■■□□□ 1.49
ACTN3-203ENST00000513398 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
ACTN3-203ENST00000513398 MAP3K4Q9Y6R4 1608 aa24.38■■□□□ 1.49
ACTN3-203ENST00000513398 A2MP01023 1474 aa24.37■■□□□ 1.49
ACTN3-203ENST00000513398 RPRD2Q5VT52 1461 aaKnown RBP24.37■■□□□ 1.49
ACTN3-203ENST00000513398 NEO1Q92859 1461 aa24.36■■□□□ 1.49
ACTN3-203ENST00000513398 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
ACTN3-203ENST00000513398 INO80Q9ULG1 1556 aaPredicted RBP24.35■■□□□ 1.49
ACTN3-203ENST00000513398 CFAP65Q6ZU64 1925 aaKnown RBP24.35■■□□□ 1.49
ACTN3-203ENST00000513398 FAM9BQ8IZU0 186 aa24.34■■□□□ 1.49
ACTN3-203ENST00000513398 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
ACTN3-203ENST00000513398 CCDC144AA2RUR9 1427 aa24.33■■□□□ 1.49
ACTN3-203ENST00000513398 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
ACTN3-203ENST00000513398 B4GALNT3Q6L9W6 998 aa24.32■■□□□ 1.48
ACTN3-203ENST00000513398 KANK1Q14678 1352 aa24.32■■□□□ 1.48
ACTN3-203ENST00000513398 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
ACTN3-203ENST00000513398 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
ACTN3-203ENST00000513398 CNGB1Q14028 1251 aaPredicted RBP24.31■■□□□ 1.48
ACTN3-203ENST00000513398 MRS2Q9HD23 443 aa24.31■■□□□ 1.48
ACTN3-203ENST00000513398 PRKRIP1Q9H875 184 aaPredicted RBP24.3■■□□□ 1.48
ACTN3-203ENST00000513398 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
ACTN3-203ENST00000513398 GLI2P10070 1586 aa24.27■■□□□ 1.48
ACTN3-203ENST00000513398 HECW2Q9P2P5 1572 aa24.27■■□□□ 1.48
ACTN3-203ENST00000513398 ZBED9Q6R2W3 1325 aa24.27■■□□□ 1.48
ACTN3-203ENST00000513398 MLH3Q9UHC1 1453 aa24.27■■□□□ 1.48
ACTN3-203ENST00000513398 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
ACTN3-203ENST00000513398 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
ACTN3-203ENST00000513398 C11orf95C9JLR9 678 aaPredicted RBP24.26■■□□□ 1.47
ACTN3-203ENST00000513398 CFAP74Q9C0B2 1584 aa24.26■■□□□ 1.47
ACTN3-203ENST00000513398 KDM5CP41229 1560 aa24.25■■□□□ 1.47
ACTN3-203ENST00000513398 TEX14Q8IWB6 1497 aa24.25■■□□□ 1.47
ACTN3-203ENST00000513398 PPRC1Q5VV67 1664 aaKnown RBP24.25■■□□□ 1.47
ACTN3-203ENST00000513398 FRMPD1Q5SYB0 1578 aa24.24■■□□□ 1.47
ACTN3-203ENST00000513398 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
ACTN3-203ENST00000513398 UNC13BO14795 1591 aa24.24■■□□□ 1.47
ACTN3-203ENST00000513398 KDM5DQ9BY66 1539 aa24.23■■□□□ 1.47
ACTN3-203ENST00000513398 UGGT1Q9NYU2 1555 aa24.23■■□□□ 1.47
ACTN3-203ENST00000513398 NBPF1Q3BBV0 1214 aa24.22■■□□□ 1.47
ACTN3-203ENST00000513398 RICTORQ6R327 1708 aa24.2■■□□□ 1.46
ACTN3-203ENST00000513398 DIP2CQ9Y2E4 1556 aa24.18■■□□□ 1.46
ACTN3-203ENST00000513398 IQGAP3Q86VI3 1631 aa24.18■■□□□ 1.46
ACTN3-203ENST00000513398 CARD11Q9BXL7 1154 aa24.17■■□□□ 1.46
ACTN3-203ENST00000513398 DEKP35659 375 aaKnown RBP24.15■■□□□ 1.46
ACTN3-203ENST00000513398 ATP10AO60312 1499 aa24.15■■□□□ 1.46
ACTN3-203ENST00000513398 MAGI2Q86UL8 1455 aa24.15■■□□□ 1.46
ACTN3-203ENST00000513398 E9PCH4 1651 aa24.14■■□□□ 1.46
ACTN3-203ENST00000513398 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.45
ACTN3-203ENST00000513398 NOP58Q9Y2X3 529 aaKnown RBP24.13■■□□□ 1.45
ACTN3-203ENST00000513398 CEP152O94986 1710 aa24.12■■□□□ 1.45
ACTN3-203ENST00000513398 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
ACTN3-203ENST00000513398 NPATQ14207 1427 aa24.11■■□□□ 1.45
ACTN3-203ENST00000513398 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
ACTN3-203ENST00000513398 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
ACTN3-203ENST00000513398 CEBPAP49715 358 aaPredicted RBP24.08■■□□□ 1.45
ACTN3-203ENST00000513398 ROCK2O75116 1388 aaKnown RBP24.07■■□□□ 1.44
ACTN3-203ENST00000513398 ST20-MTHFSA0A0A6YYL1 179 aa24.06■■□□□ 1.44
ACTN3-203ENST00000513398 IDI1Q13907 227 aa24.05■■□□□ 1.44
ACTN3-203ENST00000513398 NBR1Q14596 966 aa24.05■■□□□ 1.44
ACTN3-203ENST00000513398 DEPDC5O75140 1603 aa24.04■■□□□ 1.44
ACTN3-203ENST00000513398 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
ACTN3-203ENST00000513398 PAK3O75914 559 aaPredicted RBP24.04■■□□□ 1.44
ACTN3-203ENST00000513398 ADGRF5Q8IZF2 1346 aa24.03■■□□□ 1.44
ACTN3-203ENST00000513398 STAG3Q9UJ98 1225 aa24.03■■□□□ 1.44
ACTN3-203ENST00000513398 SIGLEC1Q9BZZ2 1709 aa24.02■■□□□ 1.44
ACTN3-203ENST00000513398 USP47Q96K76 1375 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms