RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 ARIH1Q9Y4X5 557 aaPredicted RBP12.01□□□□□ -0.49
DHFR-207ENST00000513314 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
DHFR-207ENST00000513314 DDX12PQ92771 950 aa12□□□□□ -0.49
DHFR-207ENST00000513314 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
DHFR-207ENST00000513314 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
DHFR-207ENST00000513314 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
DHFR-207ENST00000513314 BHMG1C9JSJ3 638 aaPredicted RBP11.97□□□□□ -0.49
DHFR-207ENST00000513314 COL9A1P20849 921 aa11.96□□□□□ -0.49
DHFR-207ENST00000513314 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
DHFR-207ENST00000513314 RBM33Q96EV2 1170 aaKnown RBP11.95□□□□□ -0.5
DHFR-207ENST00000513314 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
DHFR-207ENST00000513314 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
DHFR-207ENST00000513314 NBR1Q14596 966 aa11.93□□□□□ -0.5
DHFR-207ENST00000513314 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
DHFR-207ENST00000513314 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
DHFR-207ENST00000513314 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
DHFR-207ENST00000513314 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
DHFR-207ENST00000513314 MAP3K7O43318 606 aa11.89□□□□□ -0.51
DHFR-207ENST00000513314 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
DHFR-207ENST00000513314 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
DHFR-207ENST00000513314 WNT2BQ93097 391 aa11.86□□□□□ -0.51
DHFR-207ENST00000513314 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
DHFR-207ENST00000513314 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
DHFR-207ENST00000513314 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
DHFR-207ENST00000513314 PTPN5P54829 565 aa11.84□□□□□ -0.51
DHFR-207ENST00000513314 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
DHFR-207ENST00000513314 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
DHFR-207ENST00000513314 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
DHFR-207ENST00000513314 LAPTM4BQ86VI4 370 aa11.83□□□□□ -0.52
DHFR-207ENST00000513314 OSBPP22059 807 aa11.81□□□□□ -0.52
DHFR-207ENST00000513314 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
DHFR-207ENST00000513314 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
DHFR-207ENST00000513314 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
DHFR-207ENST00000513314 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
DHFR-207ENST00000513314 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
DHFR-207ENST00000513314 PACS2Q86VP3 889 aa11.78□□□□□ -0.52
DHFR-207ENST00000513314 PRSS12P56730 875 aa11.76□□□□□ -0.53
DHFR-207ENST00000513314 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
DHFR-207ENST00000513314 ZFRQ96KR1 1074 aaKnown RBP11.76□□□□□ -0.53
DHFR-207ENST00000513314 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
DHFR-207ENST00000513314 TSKSQ9UJT2 592 aa11.76□□□□□ -0.53
DHFR-207ENST00000513314 FAM98CQ17RN3 349 aaKnown RBP11.75□□□□□ -0.53
DHFR-207ENST00000513314 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
DHFR-207ENST00000513314 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
DHFR-207ENST00000513314 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
DHFR-207ENST00000513314 BCAMP50895 628 aa11.71□□□□□ -0.53
DHFR-207ENST00000513314 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
DHFR-207ENST00000513314 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
DHFR-207ENST00000513314 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
DHFR-207ENST00000513314 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
DHFR-207ENST00000513314 RGS20O76081 388 aa11.67□□□□□ -0.54
DHFR-207ENST00000513314 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
DHFR-207ENST00000513314 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
DHFR-207ENST00000513314 TATDN2Q93075 761 aa11.66□□□□□ -0.54
DHFR-207ENST00000513314 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.66□□□□□ -0.54
DHFR-207ENST00000513314 SMAPO00193 183 aa11.65□□□□□ -0.54
DHFR-207ENST00000513314 NYAP1Q6ZVC0 841 aa11.65□□□□□ -0.54
DHFR-207ENST00000513314 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
DHFR-207ENST00000513314 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
DHFR-207ENST00000513314 A0A0G2JS52 829 aa11.63□□□□□ -0.55
DHFR-207ENST00000513314 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
DHFR-207ENST00000513314 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
DHFR-207ENST00000513314 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
DHFR-207ENST00000513314 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
DHFR-207ENST00000513314 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
DHFR-207ENST00000513314 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
DHFR-207ENST00000513314 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
DHFR-207ENST00000513314 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
DHFR-207ENST00000513314 SEMA3EO15041 775 aa11.6□□□□□ -0.55
DHFR-207ENST00000513314 SAMD7Q7Z3H4 446 aa11.59□□□□□ -0.55
DHFR-207ENST00000513314 HDGFP51858 240 aaKnown RBP11.58□□□□□ -0.56
DHFR-207ENST00000513314 PPP4CP60510 307 aa11.57□□□□□ -0.56
DHFR-207ENST00000513314 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
DHFR-207ENST00000513314 PTGDRQ13258 359 aa11.56□□□□□ -0.56
DHFR-207ENST00000513314 SMYD5Q6GMV2 418 aa11.53□□□□□ -0.56
DHFR-207ENST00000513314 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
DHFR-207ENST00000513314 KDM2AQ9Y2K7 1162 aa11.52□□□□□ -0.57
DHFR-207ENST00000513314 EYA1Q99502 592 aa11.51□□□□□ -0.57
DHFR-207ENST00000513314 FCHSD2O94868 740 aa11.5□□□□□ -0.57
DHFR-207ENST00000513314 RNF40O75150 1001 aa11.49□□□□□ -0.57
DHFR-207ENST00000513314 KCNC4Q03721 635 aa11.49□□□□□ -0.57
DHFR-207ENST00000513314 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
DHFR-207ENST00000513314 NECTIN2Q92692 538 aa11.48□□□□□ -0.57
DHFR-207ENST00000513314 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
DHFR-207ENST00000513314 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
DHFR-207ENST00000513314 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
DHFR-207ENST00000513314 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
DHFR-207ENST00000513314 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
DHFR-207ENST00000513314 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
DHFR-207ENST00000513314 ADGRG1Q9Y653 693 aa11.45□□□□□ -0.58
DHFR-207ENST00000513314 DNAJB2P25686 324 aa11.43□□□□□ -0.58
DHFR-207ENST00000513314 HIC1Q14526 733 aa11.42□□□□□ -0.58
DHFR-207ENST00000513314 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
DHFR-207ENST00000513314 APLP1P51693 650 aa11.4□□□□□ -0.58
DHFR-207ENST00000513314 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
DHFR-207ENST00000513314 MTRQ99707 1265 aa11.39□□□□□ -0.59
DHFR-207ENST00000513314 TMEM134Q9H6X4 195 aa11.39□□□□□ -0.59
DHFR-207ENST00000513314 IL21Q9HBE4 155 aa11.39□□□□□ -0.59
DHFR-207ENST00000513314 RCCD1A6NED2 376 aa11.38□□□□□ -0.59
DHFR-207ENST00000513314 OATP04181 439 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms