RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 GZF1Q9H116 711 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-208ENST00000511604 GRPEL1Q9HAV7 217 aa9.37□□□□□ -0.91
CPNE4-208ENST00000511604 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-208ENST00000511604 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
CPNE4-208ENST00000511604 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
CPNE4-208ENST00000511604 SECISBP2LQ93073 1101 aaKnown RBP9.36□□□□□ -0.91
CPNE4-208ENST00000511604 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
CPNE4-208ENST00000511604 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
CPNE4-208ENST00000511604 UACAQ9BZF9 1416 aa9.36□□□□□ -0.91
CPNE4-208ENST00000511604 SLKQ9H2G2 1235 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-208ENST00000511604 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
CPNE4-208ENST00000511604 CHIC2Q9UKJ5 165 aa9.35□□□□□ -0.91
CPNE4-208ENST00000511604 LETM1O95202 739 aaPredicted RBP9.35□□□□□ -0.91
CPNE4-208ENST00000511604 CCDC94Q9BW85 323 aaPredicted RBP9.35□□□□□ -0.91
CPNE4-208ENST00000511604 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
CPNE4-208ENST00000511604 ANTXR1Q9H6X2 564 aa9.34□□□□□ -0.91
CPNE4-208ENST00000511604 SEC24BO95487 1268 aa9.33□□□□□ -0.92
CPNE4-208ENST00000511604 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
CPNE4-208ENST00000511604 ARHGEF11O15085 1522 aa9.33□□□□□ -0.92
CPNE4-208ENST00000511604 KTN1Q86UP2 1357 aaKnown RBP9.33□□□□□ -0.92
CPNE4-208ENST00000511604 R3HCC1Q9Y3T6 440 aaKnown RBP9.33□□□□□ -0.92
CPNE4-208ENST00000511604 UQCRHLA0A096LP55 91 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
CPNE4-208ENST00000511604 UQCRHP07919 91 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
CPNE4-208ENST00000511604 TAF3Q5VWG9 929 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 DYNC1I1O14576 645 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 MCM4P33991 863 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 BECN1Q14457 450 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 NAIPQ13075 1403 aa9.32□□□□□ -0.92
CPNE4-208ENST00000511604 USP19O94966 1318 aa9.31□□□□□ -0.92
CPNE4-208ENST00000511604 TRAK2O60296 914 aa9.31□□□□□ -0.92
CPNE4-208ENST00000511604 KDM2BQ8NHM5 1336 aa9.3□□□□□ -0.92
CPNE4-208ENST00000511604 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
CPNE4-208ENST00000511604 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
CPNE4-208ENST00000511604 DNTTIP2Q5QJE6 756 aaKnown RBP9.3□□□□□ -0.92
CPNE4-208ENST00000511604 RGS22Q8NE09 1264 aa9.3□□□□□ -0.92
CPNE4-208ENST00000511604 TOP2BQ02880 1626 aa9.29□□□□□ -0.92
CPNE4-208ENST00000511604 MSNP26038 577 aaKnown RBP9.29□□□□□ -0.92
CPNE4-208ENST00000511604 CADPSQ9ULU8 1353 aa9.29□□□□□ -0.92
CPNE4-208ENST00000511604 HFM1A2PYH4 1435 aa9.29□□□□□ -0.92
CPNE4-208ENST00000511604 ZBTB22O15209 634 aa9.29□□□□□ -0.92
CPNE4-208ENST00000511604 IRX3P78415 501 aaPredicted RBP9.29□□□□□ -0.92
CPNE4-208ENST00000511604 PTPN23Q9H3S7 1636 aa9.28□□□□□ -0.92
CPNE4-208ENST00000511604 RNF216Q9NWF9 866 aaPredicted RBP9.27□□□□□ -0.93
CPNE4-208ENST00000511604 FGD6Q6ZV73 1430 aa9.27□□□□□ -0.93
CPNE4-208ENST00000511604 CCDC173Q0VFZ6 552 aa9.27□□□□□ -0.93
CPNE4-208ENST00000511604 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
CPNE4-208ENST00000511604 CENPQQ7L2Z9 268 aaPredicted RBP9.27□□□□□ -0.93
CPNE4-208ENST00000511604 MPHOSPH9Q99550 1183 aa9.27□□□□□ -0.93
CPNE4-208ENST00000511604 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
CPNE4-208ENST00000511604 LRPPRCP42704 1394 aaKnown RBP9.26□□□□□ -0.93
CPNE4-208ENST00000511604 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-208ENST00000511604 PPP1R9BQ96SB3 815 aa9.26□□□□□ -0.93
CPNE4-208ENST00000511604 CGNQ9P2M7 1197 aaKnown RBP9.26□□□□□ -0.93
CPNE4-208ENST00000511604 TRHP20396 242 aaPredicted RBP9.25□□□□□ -0.93
CPNE4-208ENST00000511604 FHOD3Q2V2M9 1422 aa9.25□□□□□ -0.93
CPNE4-208ENST00000511604 KDM6BO15054 1643 aa9.25□□□□□ -0.93
CPNE4-208ENST00000511604 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
CPNE4-208ENST00000511604 CBX1P83916 185 aa9.25□□□□□ -0.93
CPNE4-208ENST00000511604 GAS2L3Q86XJ1 694 aa9.25□□□□□ -0.93
CPNE4-208ENST00000511604 E9PSI1 815 aa9.24□□□□□ -0.93
CPNE4-208ENST00000511604 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
CPNE4-208ENST00000511604 SLC20A2Q08357 652 aa9.24□□□□□ -0.93
CPNE4-208ENST00000511604 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
CPNE4-208ENST00000511604 KIF27Q86VH2 1401 aa9.23□□□□□ -0.93
CPNE4-208ENST00000511604 VIRMAQ69YN4 1812 aaKnown RBP9.23□□□□□ -0.93
CPNE4-208ENST00000511604 BCCIPQ9P287 314 aaKnown RBP eCLIP9.23□□□□□ -0.93
CPNE4-208ENST00000511604 FMN1Q68DA7 1419 aa9.23□□□□□ -0.93
CPNE4-208ENST00000511604 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-208ENST00000511604 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-208ENST00000511604 IGF1RP08069 1367 aa9.22□□□□□ -0.93
CPNE4-208ENST00000511604 BCORL1Q5H9F3 1711 aa9.22□□□□□ -0.93
CPNE4-208ENST00000511604 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
CPNE4-208ENST00000511604 SASS6Q6UVJ0 657 aa9.22□□□□□ -0.93
CPNE4-208ENST00000511604 XPCQ01831 940 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-208ENST00000511604 IGHDP01880 384 aa9.21□□□□□ -0.94
CPNE4-208ENST00000511604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.21□□□□□ -0.94
CPNE4-208ENST00000511604 CUX1P39880 1505 aa9.21□□□□□ -0.94
CPNE4-208ENST00000511604 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.94
CPNE4-208ENST00000511604 HS1BP3Q53T59 392 aa9.21□□□□□ -0.94
CPNE4-208ENST00000511604 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.94
CPNE4-208ENST00000511604 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
CPNE4-208ENST00000511604 PDE3BQ13370 1112 aa9.2□□□□□ -0.94
CPNE4-208ENST00000511604 NOL7Q9UMY1 257 aaKnown RBP9.2□□□□□ -0.94
CPNE4-208ENST00000511604 NLRP1Q9C000 1473 aa9.2□□□□□ -0.94
CPNE4-208ENST00000511604 NASPP49321 788 aaPredicted RBP9.2□□□□□ -0.94
CPNE4-208ENST00000511604 CHMP5Q9NZZ3 219 aa9.2□□□□□ -0.94
CPNE4-208ENST00000511604 FANCD2Q9BXW9 1451 aa9.19□□□□□ -0.94
CPNE4-208ENST00000511604 ATP2B3Q16720 1220 aa9.19□□□□□ -0.94
CPNE4-208ENST00000511604 CERS3Q8IU89 383 aa9.19□□□□□ -0.94
CPNE4-208ENST00000511604 BIVM-ERCC5R4GMW8 1640 aa9.18□□□□□ -0.94
CPNE4-208ENST00000511604 MMP14P50281 582 aa9.18□□□□□ -0.94
CPNE4-208ENST00000511604 USP47Q96K76 1375 aa9.18□□□□□ -0.94
CPNE4-208ENST00000511604 KCNJ4P48050 445 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.17□□□□□ -0.94
CPNE4-208ENST00000511604 KCNG1Q9UIX4 513 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 TEX14Q8IWB6 1497 aa9.17□□□□□ -0.94
CPNE4-208ENST00000511604 POLR1AO95602 1720 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms