RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
COL4A3BP-205ENST00000508692 COL9A1P20849 921 aa8.83□□□□□ -1
COL4A3BP-205ENST00000508692 PDE4AP27815 886 aa8.83□□□□□ -1
COL4A3BP-205ENST00000508692 RABGEF1Q9UJ41 708 aa8.83□□□□□ -1
COL4A3BP-205ENST00000508692 CFAP44Q96MT7 982 aa8.82□□□□□ -1
COL4A3BP-205ENST00000508692 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
COL4A3BP-205ENST00000508692 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
COL4A3BP-205ENST00000508692 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
COL4A3BP-205ENST00000508692 MAP3K9P80192 1104 aa8.8□□□□□ -1
COL4A3BP-205ENST00000508692 Q6ZNB5 142 aa8.8□□□□□ -1
COL4A3BP-205ENST00000508692 DDX27Q96GQ7 796 aaKnown RBP8.8□□□□□ -1
COL4A3BP-205ENST00000508692 EMILIN3Q9NT22 766 aa8.79□□□□□ -1
COL4A3BP-205ENST00000508692 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
COL4A3BP-205ENST00000508692 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
COL4A3BP-205ENST00000508692 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
COL4A3BP-205ENST00000508692 KIAA1468Q9P260 1216 aa8.76□□□□□ -1.01
COL4A3BP-205ENST00000508692 MFSD10Q14728 455 aa8.75□□□□□ -1.01
COL4A3BP-205ENST00000508692 LAPTM4BQ86VI4 370 aa8.75□□□□□ -1.01
COL4A3BP-205ENST00000508692 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
COL4A3BP-205ENST00000508692 TYW1BQ6NUM6 668 aa8.74□□□□□ -1.01
COL4A3BP-205ENST00000508692 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
COL4A3BP-205ENST00000508692 KCNC4Q03721 635 aa8.73□□□□□ -1.01
COL4A3BP-205ENST00000508692 FBXW7Q969H0 707 aa8.73□□□□□ -1.01
COL4A3BP-205ENST00000508692 PHF14O94880 888 aa8.72□□□□□ -1.01
COL4A3BP-205ENST00000508692 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
COL4A3BP-205ENST00000508692 BCANQ96GW7 911 aa8.72□□□□□ -1.01
COL4A3BP-205ENST00000508692 LCE2BO14633 110 aa8.7□□□□□ -1.02
COL4A3BP-205ENST00000508692 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
COL4A3BP-205ENST00000508692 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 FAM98CQ17RN3 349 aaKnown RBP8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
COL4A3BP-205ENST00000508692 ONECUT3O60422 494 aaPredicted RBP8.66□□□□□ -1.02
COL4A3BP-205ENST00000508692 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
COL4A3BP-205ENST00000508692 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
COL4A3BP-205ENST00000508692 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-205ENST00000508692 GFRA3O60609 400 aa8.64□□□□□ -1.03
COL4A3BP-205ENST00000508692 LAPTM4AQ15012 233 aa8.64□□□□□ -1.03
COL4A3BP-205ENST00000508692 EPAS1Q99814 870 aa8.64□□□□□ -1.03
COL4A3BP-205ENST00000508692 DPYSL4O14531 572 aa8.63□□□□□ -1.03
COL4A3BP-205ENST00000508692 TRAF7Q6Q0C0 670 aa8.62□□□□□ -1.03
COL4A3BP-205ENST00000508692 DDX12PQ92771 950 aa8.61□□□□□ -1.03
COL4A3BP-205ENST00000508692 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
COL4A3BP-205ENST00000508692 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
COL4A3BP-205ENST00000508692 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
COL4A3BP-205ENST00000508692 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-205ENST00000508692 TJAP1Q5JTD0 557 aa8.58□□□□□ -1.04
COL4A3BP-205ENST00000508692 PPP4CP60510 307 aa8.57□□□□□ -1.04
COL4A3BP-205ENST00000508692 PACS2Q86VP3 889 aa8.56□□□□□ -1.04
COL4A3BP-205ENST00000508692 SMAPO00193 183 aa8.55□□□□□ -1.04
COL4A3BP-205ENST00000508692 MAP3K7O43318 606 aa8.55□□□□□ -1.04
COL4A3BP-205ENST00000508692 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
COL4A3BP-205ENST00000508692 NBR1Q14596 966 aa8.55□□□□□ -1.04
COL4A3BP-205ENST00000508692 SAMD7Q7Z3H4 446 aa8.55□□□□□ -1.04
COL4A3BP-205ENST00000508692 NRG2O14511 850 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-205ENST00000508692 MTRQ99707 1265 aa8.54□□□□□ -1.04
COL4A3BP-205ENST00000508692 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
COL4A3BP-205ENST00000508692 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
COL4A3BP-205ENST00000508692 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
COL4A3BP-205ENST00000508692 ZNF516Q92618 1163 aa8.51□□□□□ -1.05
COL4A3BP-205ENST00000508692 IL21Q9HBE4 155 aa8.51□□□□□ -1.05
COL4A3BP-205ENST00000508692 CDCA7LQ96GN5 454 aa8.5□□□□□ -1.05
COL4A3BP-205ENST00000508692 V9GY48 417 aaPredicted RBP8.49□□□□□ -1.05
COL4A3BP-205ENST00000508692 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
COL4A3BP-205ENST00000508692 PRSS12P56730 875 aa8.48□□□□□ -1.05
COL4A3BP-205ENST00000508692 RNF40O75150 1001 aa8.47□□□□□ -1.05
COL4A3BP-205ENST00000508692 APLP1P51693 650 aa8.47□□□□□ -1.05
COL4A3BP-205ENST00000508692 PDIA6Q15084 440 aa8.47□□□□□ -1.05
COL4A3BP-205ENST00000508692 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
COL4A3BP-205ENST00000508692 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.47□□□□□ -1.05
COL4A3BP-205ENST00000508692 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
COL4A3BP-205ENST00000508692 ZNF787Q6DD87 383 aa8.46□□□□□ -1.06
COL4A3BP-205ENST00000508692 TATDN2Q93075 761 aa8.45□□□□□ -1.06
COL4A3BP-205ENST00000508692 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
COL4A3BP-205ENST00000508692 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
COL4A3BP-205ENST00000508692 ZNF775Q96BV0 537 aaPredicted RBP8.42□□□□□ -1.06
COL4A3BP-205ENST00000508692 COPS2P61201 443 aa8.41□□□□□ -1.06
COL4A3BP-205ENST00000508692 NUDT18Q6ZVK8 323 aa8.41□□□□□ -1.06
COL4A3BP-205ENST00000508692 CERKQ8TCT0 537 aa8.41□□□□□ -1.06
COL4A3BP-205ENST00000508692 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
COL4A3BP-205ENST00000508692 SPDYE16A6NNV3 312 aaPredicted RBP8.4□□□□□ -1.06
COL4A3BP-205ENST00000508692 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
COL4A3BP-205ENST00000508692 P3H3Q8IVL6 736 aa8.39□□□□□ -1.07
COL4A3BP-205ENST00000508692 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
COL4A3BP-205ENST00000508692 GGCXP38435 758 aa8.37□□□□□ -1.07
COL4A3BP-205ENST00000508692 HDGFP51858 240 aaKnown RBP8.36□□□□□ -1.07
COL4A3BP-205ENST00000508692 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
COL4A3BP-205ENST00000508692 TRIM67Q6ZTA4 783 aa8.36□□□□□ -1.07
COL4A3BP-205ENST00000508692 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
COL4A3BP-205ENST00000508692 OSBPP22059 807 aa8.34□□□□□ -1.07
COL4A3BP-205ENST00000508692 ZPR1O75312 459 aa8.33□□□□□ -1.08
COL4A3BP-205ENST00000508692 PRKCSHP14314 528 aaPredicted RBP8.33□□□□□ -1.08
COL4A3BP-205ENST00000508692 EMID1Q96A84 441 aaPredicted RBP8.33□□□□□ -1.08
COL4A3BP-205ENST00000508692 TMUB1Q9BVT8 246 aa8.33□□□□□ -1.08
COL4A3BP-205ENST00000508692 RBM27Q9P2N5 1060 aaKnown RBP8.33□□□□□ -1.08
COL4A3BP-205ENST00000508692 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
COL4A3BP-205ENST00000508692 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms