RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4-208	ENST00000508342	TXNDC2	Q86VQ3	553 aa		4.04	□□□□□ -1.76
NEDD4-208	ENST00000508342	PSME1	Q06323	249 aa		4.04	□□□□□ -1.76
NEDD4-208	ENST00000508342	RSPH4A	Q5TD94	716 aa		4.04	□□□□□ -1.76
NEDD4-208	ENST00000508342	C9orf84	Q5VXU9	1444 aa		4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	CEBPA	P49715	358 aa	Predicted RBP	4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	PCF11	O94913	1555 aa	Known RBP	4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	SRPK2	P78362	688 aa	Known RBP	4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	TMX4	Q9H1E5	349 aa	Predicted RBP	4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	KIF13A	Q9H1H9	1805 aa		4.03	□□□□□ -1.76
NEDD4-208	ENST00000508342	NUTM2F	A1L443	756 aa		4.03	□□□□□ -1.77
NEDD4-208	ENST00000508342	ZEB1	P37275	1124 aa	Predicted RBP	4.03	□□□□□ -1.77
NEDD4-208	ENST00000508342	ABCC10	Q5T3U5	1492 aa		4.02	□□□□□ -1.77
NEDD4-208	ENST00000508342	NGDN	Q8NEJ9	315 aa	Known RBP	4.02	□□□□□ -1.77
NEDD4-208	ENST00000508342	PHLDB1	Q86UU1	1377 aa		4.02	□□□□□ -1.77
NEDD4-208	ENST00000508342	ERCC6L2	Q5T890	1561 aa		4.02	□□□□□ -1.77
NEDD4-208	ENST00000508342	FYCO1	Q9BQS8	1478 aa		4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	PPM1G	O15355	546 aa	Predicted RBP	4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	MSH6	P52701	1360 aa		4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	UGGT2	Q9NYU1	1516 aa		4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	ADGB	Q8N7X0	1667 aa		4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	ESCO1	Q5FWF5	840 aa		4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	HECW2	Q9P2P5	1572 aa		4.01	□□□□□ -1.77
NEDD4-208	ENST00000508342	ZNF518A	Q6AHZ1	1483 aa		4	□□□□□ -1.77
NEDD4-208	ENST00000508342	ADAMTS2	O95450	1211 aa		4	□□□□□ -1.77
NEDD4-208	ENST00000508342	ATP10A	O60312	1499 aa		4	□□□□□ -1.77
NEDD4-208	ENST00000508342	NUP160	Q12769	1436 aa		4	□□□□□ -1.77
NEDD4-208	ENST00000508342	DIP2B	Q9P265	1576 aa		4	□□□□□ -1.77
NEDD4-208	ENST00000508342	ACIN1	Q9UKV3	1341 aa	Known RBP	4	□□□□□ -1.77
NEDD4-208	ENST00000508342	ZNF316	A6NFI3	1004 aa	Predicted RBP	4	□□□□□ -1.77
NEDD4-208	ENST00000508342	MAP3K4	Q9Y6R4	1608 aa		3.99	□□□□□ -1.77
NEDD4-208	ENST00000508342	AFAP1	Q8N556	730 aa		3.99	□□□□□ -1.77
NEDD4-208	ENST00000508342	NGLY1	Q96IV0	654 aa		3.99	□□□□□ -1.77
NEDD4-208	ENST00000508342	CNTLN	Q9NXG0	1405 aa		3.99	□□□□□ -1.77
NEDD4-208	ENST00000508342	C8orf37	Q96NL8	207 aa		3.99	□□□□□ -1.77
NEDD4-208	ENST00000508342	YTHDC1	Q96MU7	727 aa	Known RBP	3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	TNR	Q92752	1358 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	PREX1	Q8TCU6	1659 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	SYCP2	Q9BX26	1530 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	CANX	P27824	592 aa	Known RBP	3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	CERK	Q8TCT0	537 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	SYTL4	Q96C24	671 aa	Predicted RBP	3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	TONSL	Q96HA7	1378 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	STRN4	Q9NRL3	753 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	NUP155	O75694	1391 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	SHROOM2	Q13796	1616 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	ABCA8	O94911	1581 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	PTPN23	Q9H3S7	1636 aa		3.98	□□□□□ -1.77
NEDD4-208	ENST00000508342	CASKIN1	Q8WXD9	1431 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	FBXO41	Q8TF61	875 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	KIF1B	O60333	1816 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	CAMSAP2	Q08AD1	1489 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	MAPKBP1	O60336	1514 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342		G3V3G9	751 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	DCAF8	Q5TAQ9	597 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	CNKSR2	Q8WXI2	1034 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	EIF5B	O60841	1220 aa	Known RBP	3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	PKD2	Q13563	968 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	TMEM132A	Q24JP5	1023 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	LRPPRC	P42704	1394 aa	Known RBP	3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	UHRF1BP1L	A0JNW5	1464 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	NCOA2	Q15596	1464 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	PDE3B	Q13370	1112 aa		3.97	□□□□□ -1.77
NEDD4-208	ENST00000508342	MADD	Q8WXG6	1647 aa		3.96	□□□□□ -1.77
NEDD4-208	ENST00000508342	GPRASP1	Q5JY77	1395 aa		3.96	□□□□□ -1.77
NEDD4-208	ENST00000508342	CDK11B	P21127	795 aa	Known RBP	3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	PIAS4	Q8N2W9	510 aa	Predicted RBP	3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	TRO	Q12816	1431 aa	Predicted RBP	3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	CEP152	O94986	1710 aa		3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	ATP10B	O94823	1461 aa		3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	NEO1	Q92859	1461 aa		3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	EIF3A	Q14152	1382 aa	Known RBP	3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	ILDR1	Q86SU0	546 aa	Predicted RBP	3.96	□□□□□ -1.78
NEDD4-208	ENST00000508342	MAPK8IP2	Q13387	824 aa	Predicted RBP	3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	ZRANB1	Q9UGI0	708 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	PREX2	Q70Z35	1606 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	CCDC141	Q6ZP82	1450 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	VGF	O15240	615 aa	Predicted RBP	3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	TTC37	Q6PGP7	1564 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	DCAF11	Q8TEB1	546 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	ZNF772	Q68DY9	489 aa	Predicted RBP	3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	SPRYD3	Q8NCJ5	442 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	USP35	Q9P2H5	1018 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	ZNF330	Q9Y3S2	320 aa	Predicted RBP	3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	PTPRK	Q15262	1439 aa		3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	SETD1A	O15047	1707 aa	Known RBP	3.95	□□□□□ -1.78
NEDD4-208	ENST00000508342	TRIM26	Q12899	539 aa	Predicted RBP	3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	RTL5	Q5HYW3	569 aa	Predicted RBP	3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	LTV1	Q96GA3	475 aa	Predicted RBP	3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	ATP7A	Q04656	1500 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	MYOM3	Q5VTT5	1437 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	RBM33	Q96EV2	1170 aa	Known RBP	3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	KIF15	Q9NS87	1388 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	GLI2	P10070	1586 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	A2M	P01023	1474 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	PLCH2	O75038	1416 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	RXRB	P28702	533 aa		3.94	□□□□□ -1.78
NEDD4-208	ENST00000508342	EIF4G2	P78344	907 aa	Known RBP eCLIP	3.94	□□□□□ -1.78

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