RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 AKNAQ7Z591 1439 aa6.84□□□□□ -1.32
HMGB3P16-201ENST00000508037 CTTNBP2Q8WZ74 1663 aa6.84□□□□□ -1.32
HMGB3P16-201ENST00000508037 PTPN23Q9H3S7 1636 aa6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 EHBP1L1Q8N3D4 1523 aa6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 G3V3G9 751 aa6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 ILDR1Q86SU0 546 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 TRIM52Q96A61 297 aa6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 FHOD3Q2V2M9 1422 aa6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 MYOM3Q5VTT5 1437 aa6.83□□□□□ -1.32
HMGB3P16-201ENST00000508037 FANCD2Q9BXW9 1451 aa6.82□□□□□ -1.32
HMGB3P16-201ENST00000508037 BCL11AQ9H165 835 aa6.82□□□□□ -1.32
HMGB3P16-201ENST00000508037 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
HMGB3P16-201ENST00000508037 SUPT6HQ7KZ85 1726 aaKnown RBP6.81□□□□□ -1.32
HMGB3P16-201ENST00000508037 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
HMGB3P16-201ENST00000508037 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGB3P16-201ENST00000508037 HNRNPUQ00839 825 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGB3P16-201ENST00000508037 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.81□□□□□ -1.32
HMGB3P16-201ENST00000508037 NAIPQ13075 1403 aa6.81□□□□□ -1.32
HMGB3P16-201ENST00000508037 SNAPC4Q5SXM2 1469 aa6.8□□□□□ -1.32
HMGB3P16-201ENST00000508037 NLRP6P59044 892 aa6.8□□□□□ -1.32
HMGB3P16-201ENST00000508037 DPY19L2Q6NUT2 758 aa6.8□□□□□ -1.32
HMGB3P16-201ENST00000508037 C3orf67Q6ZVT6 689 aa6.8□□□□□ -1.32
HMGB3P16-201ENST00000508037 TCOF1Q13428 1488 aaKnown RBP6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 NCOA2Q15596 1464 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 SAMD9Q5K651 1589 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 CNTLNQ9NXG0 1405 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 P3H3Q8IVL6 736 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 SLAIN1Q8ND83 568 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 PHF8Q9UPP1 1060 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 TOPBP1Q92547 1522 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 HECW1Q76N89 1606 aa6.79□□□□□ -1.32
HMGB3P16-201ENST00000508037 CHGAP10645 457 aaKnown RBP6.78□□□□□ -1.32
HMGB3P16-201ENST00000508037 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
HMGB3P16-201ENST00000508037 BOLA1Q9Y3E2 137 aa6.78□□□□□ -1.32
HMGB3P16-201ENST00000508037 POLA1P09884 1462 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P16-201ENST00000508037 GRIN2BQ13224 1484 aa6.78□□□□□ -1.32
HMGB3P16-201ENST00000508037 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.32
HMGB3P16-201ENST00000508037 ZBED9Q6R2W3 1325 aa6.77□□□□□ -1.32
HMGB3P16-201ENST00000508037 MIA2Q96PC5 1412 aa6.77□□□□□ -1.33
HMGB3P16-201ENST00000508037 UGGT2Q9NYU1 1516 aa6.77□□□□□ -1.33
HMGB3P16-201ENST00000508037 AMER1Q5JTC6 1135 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P16-201ENST00000508037 ARHGEF11O15085 1522 aa6.76□□□□□ -1.33
HMGB3P16-201ENST00000508037 HSPA5P11021 654 aaKnown RBP6.76□□□□□ -1.33
HMGB3P16-201ENST00000508037 HIRIP3Q9BW71 556 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P16-201ENST00000508037 KDM5BQ9UGL1 1544 aa6.76□□□□□ -1.33
HMGB3P16-201ENST00000508037 PTPRKQ15262 1439 aa6.76□□□□□ -1.33
HMGB3P16-201ENST00000508037 MFRPQ9BY79 579 aa6.75□□□□□ -1.33
HMGB3P16-201ENST00000508037 NCOA1Q15788 1441 aa6.75□□□□□ -1.33
HMGB3P16-201ENST00000508037 WASHC2AQ641Q2 1341 aa6.75□□□□□ -1.33
HMGB3P16-201ENST00000508037 RAD54L2Q9Y4B4 1467 aa6.74□□□□□ -1.33
HMGB3P16-201ENST00000508037 ROCK1Q13464 1354 aa6.74□□□□□ -1.33
HMGB3P16-201ENST00000508037 CCDC7Q96M83 1385 aa6.74□□□□□ -1.33
HMGB3P16-201ENST00000508037 FBXO22Q8NEZ5 403 aa6.74□□□□□ -1.33
HMGB3P16-201ENST00000508037 MS4A4AQ96JQ5 239 aa6.74□□□□□ -1.33
HMGB3P16-201ENST00000508037 ARID4BQ4LE39 1312 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P16-201ENST00000508037 PRKRIP1Q9H875 184 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P16-201ENST00000508037 MRS2Q9HD23 443 aa6.73□□□□□ -1.33
HMGB3P16-201ENST00000508037 ABCA5Q8WWZ7 1642 aa6.72□□□□□ -1.33
HMGB3P16-201ENST00000508037 MPHOSPH9Q99550 1183 aa6.72□□□□□ -1.33
HMGB3P16-201ENST00000508037 TMEM121BQ9BXQ6 578 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P16-201ENST00000508037 LAMC3Q9Y6N6 1575 aa6.72□□□□□ -1.33
HMGB3P16-201ENST00000508037 GAPVD1Q14C86 1478 aa6.72□□□□□ -1.33
HMGB3P16-201ENST00000508037 RPRD2Q5VT52 1461 aaKnown RBP6.72□□□□□ -1.33
HMGB3P16-201ENST00000508037 SMG6Q86US8 1419 aaKnown RBP6.71□□□□□ -1.34
HMGB3P16-201ENST00000508037 SNPHO15079 494 aa6.71□□□□□ -1.34
HMGB3P16-201ENST00000508037 MICALL2Q8IY33 904 aa6.71□□□□□ -1.34
HMGB3P16-201ENST00000508037 FAM163AQ96GL9 167 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P16-201ENST00000508037 ROCK2O75116 1388 aaKnown RBP6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 ANP32AP39687 249 aaKnown RBP6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 RRP7BPQ9NSQ0 103 aa6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 RYDENQ9NUL5 291 aaKnown RBP6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 EPRSP07814 1512 aaKnown RBP6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 POLR1AO95602 1720 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P16-201ENST00000508037 KTN1Q86UP2 1357 aaKnown RBP6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 ANKRD30BQ9BXX2 1392 aa6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 PDS5BQ9NTI5 1447 aa6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 FAM9BQ8IZU0 186 aa6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 L3MBTL2Q969R5 705 aa6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 DNAJC5Q9H3Z4 198 aa6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
HMGB3P16-201ENST00000508037 NESP48681 1621 aa6.68□□□□□ -1.34
HMGB3P16-201ENST00000508037 TEX14Q8IWB6 1497 aa6.68□□□□□ -1.34
HMGB3P16-201ENST00000508037 LRRIQ1Q96JM4 1722 aa6.68□□□□□ -1.34
HMGB3P16-201ENST00000508037 IRX6P78412 446 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P16-201ENST00000508037 NUDCQ9Y266 331 aa6.68□□□□□ -1.34
HMGB3P16-201ENST00000508037 DAPK1P53355 1430 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 SPATA31E1Q6ZUB1 1445 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 URB2Q14146 1524 aaKnown RBP6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 IQGAP2Q13576 1575 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 PLSCR2Q9NRY7 297 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 CHIC2Q9UKJ5 165 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 KIF7Q2M1P5 1343 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 RNF123Q5XPI4 1314 aa6.67□□□□□ -1.34
HMGB3P16-201ENST00000508037 DENND4BO75064 1496 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P16-201ENST00000508037 WDR62O43379 1518 aa6.66□□□□□ -1.34
HMGB3P16-201ENST00000508037 DNMT1P26358 1616 aaKnown RBP6.66□□□□□ -1.34
HMGB3P16-201ENST00000508037 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
HMGB3P16-201ENST00000508037 TDRD9Q8NDG6 1382 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms