RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 MYO5CQ9NQX4 1742 aa30.19■■■□□ 2.42
SPCS3-203ENST00000507678 UHRF1BP1Q6BDS2 1440 aa30.19■■■□□ 2.42
SPCS3-203ENST00000507678 ARHGEF12Q9NZN5 1544 aa30.19■■■□□ 2.42
SPCS3-203ENST00000507678 ROCK2O75116 1388 aaKnown RBP30.18■■■□□ 2.42
SPCS3-203ENST00000507678 POLR1AO95602 1720 aaPredicted RBP30.18■■■□□ 2.42
SPCS3-203ENST00000507678 EFCAB2Q5VUJ9 269 aa30.18■■■□□ 2.42
SPCS3-203ENST00000507678 DHX29Q7Z478 1369 aaKnown RBP30.15■■■□□ 2.42
SPCS3-203ENST00000507678 ZCCHC11Q5TAX3 1644 aaKnown RBP30.14■■■□□ 2.42
SPCS3-203ENST00000507678 NBPF1Q3BBV0 1214 aa30.12■■■□□ 2.41
SPCS3-203ENST00000507678 PLCH2O75038 1416 aa30.11■■■□□ 2.41
SPCS3-203ENST00000507678 AFAP1Q8N556 730 aa30.1■■■□□ 2.41
SPCS3-203ENST00000507678 CLASP1Q7Z460 1538 aa30.09■■■□□ 2.41
SPCS3-203ENST00000507678 TRAPPC8Q9Y2L5 1435 aa30.08■■■□□ 2.41
SPCS3-203ENST00000507678 PLA2R1Q13018 1463 aa30.08■■■□□ 2.41
SPCS3-203ENST00000507678 MYT1LQ9UL68 1186 aa30.08■■■□□ 2.41
SPCS3-203ENST00000507678 MAST1Q9Y2H9 1570 aa30.07■■■□□ 2.4
SPCS3-203ENST00000507678 SPAG9O60271 1321 aaKnown RBP30.02■■■□□ 2.4
SPCS3-203ENST00000507678 ARID4BQ4LE39 1312 aaPredicted RBP30.02■■■□□ 2.4
SPCS3-203ENST00000507678 UNC13BO14795 1591 aa30.02■■■□□ 2.4
SPCS3-203ENST00000507678 PRAG1Q86YV5 1406 aa30.01■■■□□ 2.4
SPCS3-203ENST00000507678 DUOX2Q9NRD8 1548 aa30.01■■■□□ 2.39
SPCS3-203ENST00000507678 ZBED9Q6R2W3 1325 aa30.01■■■□□ 2.39
SPCS3-203ENST00000507678 PLXNC1O60486 1568 aa30■■■□□ 2.39
SPCS3-203ENST00000507678 TMC1Q8TDI8 760 aa29.99■■■□□ 2.39
SPCS3-203ENST00000507678 A2MP01023 1474 aa29.98■■■□□ 2.39
SPCS3-203ENST00000507678 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
SPCS3-203ENST00000507678 ABCC1P33527 1531 aa29.96■■■□□ 2.39
SPCS3-203ENST00000507678 ERBINQ96RT1 1412 aa29.94■■■□□ 2.38
SPCS3-203ENST00000507678 IQGAP3Q86VI3 1631 aa29.94■■■□□ 2.38
SPCS3-203ENST00000507678 TRPM1Q7Z4N2 1603 aa29.9■■■□□ 2.38
SPCS3-203ENST00000507678 PNISRQ8TF01 805 aaKnown RBP29.85■■■□□ 2.37
SPCS3-203ENST00000507678 WDR7Q9Y4E6 1490 aa29.84■■■□□ 2.37
SPCS3-203ENST00000507678 KIF3BO15066 747 aa29.83■■■□□ 2.37
SPCS3-203ENST00000507678 FANCAO15360 1455 aa29.82■■■□□ 2.36
SPCS3-203ENST00000507678 MAGI2Q86UL8 1455 aa29.82■■■□□ 2.36
SPCS3-203ENST00000507678 DISP3Q9P2K9 1392 aa29.81■■■□□ 2.36
SPCS3-203ENST00000507678 CC2D1BQ5T0F9 858 aaKnown RBP29.8■■■□□ 2.36
SPCS3-203ENST00000507678 MYBBP1AQ9BQG0 1328 aaKnown RBP29.8■■■□□ 2.36
SPCS3-203ENST00000507678 SCAPERQ9BY12 1400 aa29.8■■■□□ 2.36
SPCS3-203ENST00000507678 SALL2Q9Y467 1007 aaPredicted RBP29.79■■■□□ 2.36
SPCS3-203ENST00000507678 TESK2Q96S53 571 aa29.79■■■□□ 2.36
SPCS3-203ENST00000507678 ZFYVE16Q7Z3T8 1539 aa29.78■■■□□ 2.36
SPCS3-203ENST00000507678 GPRASP1Q5JY77 1395 aa29.77■■■□□ 2.36
SPCS3-203ENST00000507678 RALBP1Q15311 655 aa29.77■■■□□ 2.36
SPCS3-203ENST00000507678 B4GALNT3Q6L9W6 998 aa29.74■■■□□ 2.35
SPCS3-203ENST00000507678 ATP10AO60312 1499 aa29.74■■■□□ 2.35
SPCS3-203ENST00000507678 PANK3Q9H999 370 aa29.73■■■□□ 2.35
SPCS3-203ENST00000507678 KTN1Q86UP2 1357 aaKnown RBP29.73■■■□□ 2.35
SPCS3-203ENST00000507678 ADGRL1O94910 1474 aa29.73■■■□□ 2.35
SPCS3-203ENST00000507678 TMF1P82094 1093 aa29.73■■■□□ 2.35
SPCS3-203ENST00000507678 RBM19Q9Y4C8 960 aaKnown RBP29.73■■■□□ 2.35
SPCS3-203ENST00000507678 RTEL1-TNFRSF6BF6WH68 1400 aa29.72■■■□□ 2.35
SPCS3-203ENST00000507678 E9PCH4 1651 aa29.72■■■□□ 2.35
SPCS3-203ENST00000507678 ASXL2Q76L83 1435 aa29.72■■■□□ 2.35
SPCS3-203ENST00000507678 PPP4R2Q9NY27 417 aa29.72■■■□□ 2.35
SPCS3-203ENST00000507678 PRDM15P57071 1507 aaPredicted RBP29.7■■■□□ 2.35
SPCS3-203ENST00000507678 NUDCQ9Y266 331 aa29.7■■■□□ 2.34
SPCS3-203ENST00000507678 BRD4O60885 1362 aaPredicted RBP29.69■■■□□ 2.34
SPCS3-203ENST00000507678 PER1O15534 1290 aaPredicted RBP29.69■■■□□ 2.34
SPCS3-203ENST00000507678 ATP7AQ04656 1500 aa29.69■■■□□ 2.34
SPCS3-203ENST00000507678 COL17A1Q9UMD9 1497 aaPredicted RBP29.69■■■□□ 2.34
SPCS3-203ENST00000507678 KANK1Q14678 1352 aa29.68■■■□□ 2.34
SPCS3-203ENST00000507678 NPM1P06748 294 aaKnown RBP eCLIP29.67■■■□□ 2.34
SPCS3-203ENST00000507678 EIF2AK4Q9P2K8 1649 aaKnown RBP29.67■■■□□ 2.34
SPCS3-203ENST00000507678 SMG6Q86US8 1419 aaKnown RBP29.66■■■□□ 2.34
SPCS3-203ENST00000507678 NLRP13Q86W25 1043 aa29.66■■■□□ 2.34
SPCS3-203ENST00000507678 ARAP3Q8WWN8 1544 aa29.65■■■□□ 2.34
SPCS3-203ENST00000507678 ABCA9Q8IUA7 1624 aa29.62■■■□□ 2.33
SPCS3-203ENST00000507678 PARD3Q8TEW0 1356 aa29.62■■■□□ 2.33
SPCS3-203ENST00000507678 ERICH6BQ5W0A0 696 aa29.61■■■□□ 2.33
SPCS3-203ENST00000507678 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
SPCS3-203ENST00000507678 TRPM2O94759 1503 aa29.6■■■□□ 2.33
SPCS3-203ENST00000507678 CLTCL1P53675 1640 aa29.6■■■□□ 2.33
SPCS3-203ENST00000507678 LRPPRCP42704 1394 aaKnown RBP29.59■■■□□ 2.33
SPCS3-203ENST00000507678 INO80Q9ULG1 1556 aaPredicted RBP29.58■■■□□ 2.33
SPCS3-203ENST00000507678 SPHKAPQ2M3C7 1700 aa29.57■■■□□ 2.32
SPCS3-203ENST00000507678 LAMC1P11047 1609 aa29.57■■■□□ 2.32
SPCS3-203ENST00000507678 CHGAP10645 457 aaKnown RBP29.57■■■□□ 2.32
SPCS3-203ENST00000507678 UGGT1Q9NYU2 1555 aa29.56■■■□□ 2.32
SPCS3-203ENST00000507678 PTPRTO14522 1441 aa29.55■■■□□ 2.32
SPCS3-203ENST00000507678 MADDQ8WXG6 1647 aa29.55■■■□□ 2.32
SPCS3-203ENST00000507678 GGT6Q6P531 493 aa29.53■■■□□ 2.32
SPCS3-203ENST00000507678 DEPDC5O75140 1603 aa29.53■■■□□ 2.32
SPCS3-203ENST00000507678 CFAP70Q5T0N1 1121 aa29.52■■■□□ 2.32
SPCS3-203ENST00000507678 TET3O43151 1660 aa29.52■■■□□ 2.32
SPCS3-203ENST00000507678 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
SPCS3-203ENST00000507678 CEP152O94986 1710 aa29.49■■■□□ 2.31
SPCS3-203ENST00000507678 KNSTRNQ9Y448 316 aa29.49■■■□□ 2.31
SPCS3-203ENST00000507678 ADGRF5Q8IZF2 1346 aa29.48■■■□□ 2.31
SPCS3-203ENST00000507678 CD109Q6YHK3 1445 aa29.46■■■□□ 2.31
SPCS3-203ENST00000507678 SCAF11Q99590 1463 aaKnown RBP29.45■■■□□ 2.31
SPCS3-203ENST00000507678 WASHC2CQ9Y4E1 1318 aa29.44■■■□□ 2.3
SPCS3-203ENST00000507678 CDCA7LQ96GN5 454 aa29.44■■■□□ 2.3
SPCS3-203ENST00000507678 KIDINS220Q9ULH0 1771 aa29.43■■■□□ 2.3
SPCS3-203ENST00000507678 VWDEQ8N2E2 1590 aa29.42■■■□□ 2.3
SPCS3-203ENST00000507678 MROH1Q8NDA8 1641 aa29.42■■■□□ 2.3
SPCS3-203ENST00000507678 CCDC136Q96JN2 1154 aa29.42■■■□□ 2.3
SPCS3-203ENST00000507678 ZNF518AQ6AHZ1 1483 aa29.42■■■□□ 2.3
SPCS3-203ENST00000507678 IQGAP1P46940 1657 aa29.4■■■□□ 2.3
SPCS3-203ENST00000507678 RAPGEF3O95398 923 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms