RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 AXIN2Q9Y2T1 843 aa8.58□□□□□ -1.04
CDC42SE2-210ENST00000506929 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
CDC42SE2-210ENST00000506929 PHF14O94880 888 aa8.56□□□□□ -1.04
CDC42SE2-210ENST00000506929 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-210ENST00000506929 TYW1BQ6NUM6 668 aa8.56□□□□□ -1.04
CDC42SE2-210ENST00000506929 FBXW7Q969H0 707 aa8.56□□□□□ -1.04
CDC42SE2-210ENST00000506929 CDHR5Q9HBB8 845 aa8.56□□□□□ -1.04
CDC42SE2-210ENST00000506929 BCANQ96GW7 911 aa8.55□□□□□ -1.04
CDC42SE2-210ENST00000506929 KCNK17Q96T54 332 aa8.55□□□□□ -1.04
CDC42SE2-210ENST00000506929 EPAS1Q99814 870 aa8.55□□□□□ -1.04
CDC42SE2-210ENST00000506929 PTPREP23469 700 aa8.54□□□□□ -1.04
CDC42SE2-210ENST00000506929 PSEN2P49810 448 aa8.54□□□□□ -1.04
CDC42SE2-210ENST00000506929 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDC42SE2-210ENST00000506929 TK2O00142 265 aa8.52□□□□□ -1.05
CDC42SE2-210ENST00000506929 COL9A1P20849 921 aa8.52□□□□□ -1.05
CDC42SE2-210ENST00000506929 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE2-210ENST00000506929 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
CDC42SE2-210ENST00000506929 MAP3K7O43318 606 aa8.5□□□□□ -1.05
CDC42SE2-210ENST00000506929 C6orf132Q5T0Z8 1188 aa8.5□□□□□ -1.05
CDC42SE2-210ENST00000506929 LMOD2Q6P5Q4 547 aa8.49□□□□□ -1.05
CDC42SE2-210ENST00000506929 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
CDC42SE2-210ENST00000506929 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
CDC42SE2-210ENST00000506929 NPDC1Q9NQX5 325 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-210ENST00000506929 NUTM2FA1L443 756 aa8.48□□□□□ -1.05
CDC42SE2-210ENST00000506929 GPR37O15354 613 aa8.47□□□□□ -1.05
CDC42SE2-210ENST00000506929 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
CDC42SE2-210ENST00000506929 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.06
CDC42SE2-210ENST00000506929 VPS9D1Q9Y2B5 631 aa8.46□□□□□ -1.06
CDC42SE2-210ENST00000506929 FECHP22830 423 aa8.45□□□□□ -1.06
CDC42SE2-210ENST00000506929 SMYD5Q6GMV2 418 aa8.45□□□□□ -1.06
CDC42SE2-210ENST00000506929 ZBED2Q9BTP6 218 aa8.45□□□□□ -1.06
CDC42SE2-210ENST00000506929 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
CDC42SE2-210ENST00000506929 HRO43593 1189 aa8.44□□□□□ -1.06
CDC42SE2-210ENST00000506929 PROX2Q3B8N5 592 aa8.44□□□□□ -1.06
CDC42SE2-210ENST00000506929 FAM198AQ9UFP1 575 aa8.44□□□□□ -1.06
CDC42SE2-210ENST00000506929 PTGDRQ13258 359 aa8.43□□□□□ -1.06
CDC42SE2-210ENST00000506929 RNF166Q96A37 237 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE2-210ENST00000506929 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
CDC42SE2-210ENST00000506929 GPIHBP1Q8IV16 184 aa8.42□□□□□ -1.06
CDC42SE2-210ENST00000506929 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-210ENST00000506929 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
CDC42SE2-210ENST00000506929 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-210ENST00000506929 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
CDC42SE2-210ENST00000506929 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
CDC42SE2-210ENST00000506929 TSKSQ9UJT2 592 aa8.39□□□□□ -1.07
CDC42SE2-210ENST00000506929 BHMG1C9JSJ3 638 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-210ENST00000506929 ONECUT3O60422 494 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-210ENST00000506929 NBPF3Q9H094 633 aa8.38□□□□□ -1.07
CDC42SE2-210ENST00000506929 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
CDC42SE2-210ENST00000506929 TULP1O00294 542 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE2-210ENST00000506929 FCHSD2O94868 740 aa8.37□□□□□ -1.07
CDC42SE2-210ENST00000506929 CDCA7LQ96GN5 454 aa8.37□□□□□ -1.07
CDC42SE2-210ENST00000506929 TRIM6-TRIM34B2RNG4 842 aa8.36□□□□□ -1.07
CDC42SE2-210ENST00000506929 SMAPO00193 183 aa8.36□□□□□ -1.07
CDC42SE2-210ENST00000506929 PRSS12P56730 875 aa8.36□□□□□ -1.07
CDC42SE2-210ENST00000506929 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
CDC42SE2-210ENST00000506929 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-210ENST00000506929 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
CDC42SE2-210ENST00000506929 TTC13Q8NBP0 860 aa8.34□□□□□ -1.07
CDC42SE2-210ENST00000506929 GOLGA8CPA6NN73 597 aa8.33□□□□□ -1.08
CDC42SE2-210ENST00000506929 GNPATO15228 680 aa8.33□□□□□ -1.08
CDC42SE2-210ENST00000506929 ZMYND10O75800 440 aa8.33□□□□□ -1.08
CDC42SE2-210ENST00000506929 PACS2Q86VP3 889 aa8.33□□□□□ -1.08
CDC42SE2-210ENST00000506929 HIC1Q14526 733 aa8.32□□□□□ -1.08
CDC42SE2-210ENST00000506929 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
CDC42SE2-210ENST00000506929 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
CDC42SE2-210ENST00000506929 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
CDC42SE2-210ENST00000506929 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-210ENST00000506929 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-210ENST00000506929 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
CDC42SE2-210ENST00000506929 NUDT18Q6ZVK8 323 aa8.3□□□□□ -1.08
CDC42SE2-210ENST00000506929 PHOX2BQ99453 314 aa8.3□□□□□ -1.08
CDC42SE2-210ENST00000506929 HCSTQ9UBK5 93 aa8.3□□□□□ -1.08
CDC42SE2-210ENST00000506929 WNT2BQ93097 391 aa8.29□□□□□ -1.08
CDC42SE2-210ENST00000506929 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
CDC42SE2-210ENST00000506929 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
CDC42SE2-210ENST00000506929 FAM98CQ17RN3 349 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-210ENST00000506929 TATDN2Q93075 761 aa8.28□□□□□ -1.08
CDC42SE2-210ENST00000506929 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
CDC42SE2-210ENST00000506929 NBPF26B4DH59 902 aa8.27□□□□□ -1.09
CDC42SE2-210ENST00000506929 ANKK1Q8NFD2 765 aa8.27□□□□□ -1.09
CDC42SE2-210ENST00000506929 EYA1Q99502 592 aa8.27□□□□□ -1.09
CDC42SE2-210ENST00000506929 THSD4Q6ZMP0 1018 aa8.26□□□□□ -1.09
CDC42SE2-210ENST00000506929 KRI1Q8N9T8 703 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-210ENST00000506929 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
CDC42SE2-210ENST00000506929 ZFRQ96KR1 1074 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-210ENST00000506929 IRF6O14896 467 aa8.25□□□□□ -1.09
CDC42SE2-210ENST00000506929 MAP2K5Q13163 448 aa8.25□□□□□ -1.09
CDC42SE2-210ENST00000506929 METTL3Q86U44 580 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-210ENST00000506929 PXYLP1Q8TE99 480 aa8.23□□□□□ -1.09
CDC42SE2-210ENST00000506929 SOWAHBA6NEL2 793 aa8.22□□□□□ -1.09
CDC42SE2-210ENST00000506929 PTPN5P54829 565 aa8.22□□□□□ -1.09
CDC42SE2-210ENST00000506929 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-210ENST00000506929 REPIN1Q9BWE0 567 aaKnown RBP8.21□□□□□ -1.1
CDC42SE2-210ENST00000506929 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE2-210ENST00000506929 RCCD1A6NED2 376 aa8.2□□□□□ -1.1
CDC42SE2-210ENST00000506929 BCAMP50895 628 aa8.2□□□□□ -1.1
CDC42SE2-210ENST00000506929 LRCH3Q96II8 777 aa8.2□□□□□ -1.1
CDC42SE2-210ENST00000506929 TRIM66O15016 1216 aa8.19□□□□□ -1.1
CDC42SE2-210ENST00000506929 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms