RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
SMARCAD1-205ENST00000506089 COL9A1P20849 921 aa9.47□□□□□ -0.89
SMARCAD1-205ENST00000506089 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
SMARCAD1-205ENST00000506089 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
SMARCAD1-205ENST00000506089 WBP1LQ9NX94 342 aa9.47□□□□□ -0.89
SMARCAD1-205ENST00000506089 KCNC4Q03721 635 aa9.46□□□□□ -0.9
SMARCAD1-205ENST00000506089 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.9
SMARCAD1-205ENST00000506089 NCKAP5LQ9HCH0 1330 aa9.45□□□□□ -0.9
SMARCAD1-205ENST00000506089 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
SMARCAD1-205ENST00000506089 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
SMARCAD1-205ENST00000506089 TRAF7Q6Q0C0 670 aa9.44□□□□□ -0.9
SMARCAD1-205ENST00000506089 GFRA3O60609 400 aa9.43□□□□□ -0.9
SMARCAD1-205ENST00000506089 NYAP1Q6ZVC0 841 aa9.43□□□□□ -0.9
SMARCAD1-205ENST00000506089 ZFRQ96KR1 1074 aaKnown RBP9.43□□□□□ -0.9
SMARCAD1-205ENST00000506089 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
SMARCAD1-205ENST00000506089 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
SMARCAD1-205ENST00000506089 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
SMARCAD1-205ENST00000506089 SEPT9Q9UHD8 586 aaPredicted RBP9.41□□□□□ -0.9
SMARCAD1-205ENST00000506089 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
SMARCAD1-205ENST00000506089 PDE4AP27815 886 aa9.38□□□□□ -0.91
SMARCAD1-205ENST00000506089 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
SMARCAD1-205ENST00000506089 LARP6Q9BRS8 491 aaKnown RBP9.35□□□□□ -0.91
SMARCAD1-205ENST00000506089 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
SMARCAD1-205ENST00000506089 HPS5Q9UPZ3 1129 aa9.35□□□□□ -0.91
SMARCAD1-205ENST00000506089 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
SMARCAD1-205ENST00000506089 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
SMARCAD1-205ENST00000506089 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
SMARCAD1-205ENST00000506089 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
SMARCAD1-205ENST00000506089 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.33□□□□□ -0.92
SMARCAD1-205ENST00000506089 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
SMARCAD1-205ENST00000506089 MFSD10Q14728 455 aa9.32□□□□□ -0.92
SMARCAD1-205ENST00000506089 FAM98CQ17RN3 349 aaKnown RBP9.32□□□□□ -0.92
SMARCAD1-205ENST00000506089 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
SMARCAD1-205ENST00000506089 PHF14O94880 888 aa9.31□□□□□ -0.92
SMARCAD1-205ENST00000506089 PLCB2Q00722 1185 aa9.31□□□□□ -0.92
SMARCAD1-205ENST00000506089 LRCH3Q96II8 777 aa9.31□□□□□ -0.92
SMARCAD1-205ENST00000506089 ONECUT3O60422 494 aaPredicted RBP9.3□□□□□ -0.92
SMARCAD1-205ENST00000506089 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
SMARCAD1-205ENST00000506089 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
SMARCAD1-205ENST00000506089 TJAP1Q5JTD0 557 aa9.27□□□□□ -0.93
SMARCAD1-205ENST00000506089 ZNF787Q6DD87 383 aa9.27□□□□□ -0.93
SMARCAD1-205ENST00000506089 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
SMARCAD1-205ENST00000506089 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
SMARCAD1-205ENST00000506089 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
SMARCAD1-205ENST00000506089 V9GY48 417 aaPredicted RBP9.23□□□□□ -0.93
SMARCAD1-205ENST00000506089 PPP4CP60510 307 aa9.22□□□□□ -0.93
SMARCAD1-205ENST00000506089 EPAS1Q99814 870 aa9.22□□□□□ -0.93
SMARCAD1-205ENST00000506089 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
SMARCAD1-205ENST00000506089 MTRQ99707 1265 aa9.21□□□□□ -0.94
SMARCAD1-205ENST00000506089 TSKSQ9UJT2 592 aa9.2□□□□□ -0.94
SMARCAD1-205ENST00000506089 PDZRN3Q9UPQ7 1066 aa9.2□□□□□ -0.94
SMARCAD1-205ENST00000506089 ZNF516Q92618 1163 aa9.18□□□□□ -0.94
SMARCAD1-205ENST00000506089 IL21Q9HBE4 155 aa9.18□□□□□ -0.94
SMARCAD1-205ENST00000506089 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
SMARCAD1-205ENST00000506089 SMAPO00193 183 aa9.16□□□□□ -0.94
SMARCAD1-205ENST00000506089 HAP1P54257 671 aaPredicted RBP9.16□□□□□ -0.94
SMARCAD1-205ENST00000506089 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
SMARCAD1-205ENST00000506089 DDX12PQ92771 950 aa9.16□□□□□ -0.94
SMARCAD1-205ENST00000506089 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
SMARCAD1-205ENST00000506089 DPYSL4O14531 572 aa9.15□□□□□ -0.94
SMARCAD1-205ENST00000506089 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
SMARCAD1-205ENST00000506089 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
SMARCAD1-205ENST00000506089 E2F4Q16254 413 aa9.12□□□□□ -0.95
SMARCAD1-205ENST00000506089 WDR70Q9NW82 654 aa9.12□□□□□ -0.95
SMARCAD1-205ENST00000506089 C3orf80F5H4A9 247 aa9.11□□□□□ -0.95
SMARCAD1-205ENST00000506089 MAP3K7O43318 606 aa9.11□□□□□ -0.95
SMARCAD1-205ENST00000506089 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
SMARCAD1-205ENST00000506089 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
SMARCAD1-205ENST00000506089 FAM198AQ9UFP1 575 aa9.1□□□□□ -0.95
SMARCAD1-205ENST00000506089 APLP1P51693 650 aa9.09□□□□□ -0.95
SMARCAD1-205ENST00000506089 NBR1Q14596 966 aa9.09□□□□□ -0.95
SMARCAD1-205ENST00000506089 RNF40O75150 1001 aa9.07□□□□□ -0.96
SMARCAD1-205ENST00000506089 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
SMARCAD1-205ENST00000506089 POTECB2RU33 542 aa9.06□□□□□ -0.96
SMARCAD1-205ENST00000506089 TRIM67Q6ZTA4 783 aa9.06□□□□□ -0.96
SMARCAD1-205ENST00000506089 KCNV2Q8TDN2 545 aa9.06□□□□□ -0.96
SMARCAD1-205ENST00000506089 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
SMARCAD1-205ENST00000506089 PRSS12P56730 875 aa9.04□□□□□ -0.96
SMARCAD1-205ENST00000506089 COPS2P61201 443 aa9.04□□□□□ -0.96
SMARCAD1-205ENST00000506089 TATDN2Q93075 761 aa9.04□□□□□ -0.96
SMARCAD1-205ENST00000506089 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
SMARCAD1-205ENST00000506089 GGCXP38435 758 aa9.03□□□□□ -0.96
SMARCAD1-205ENST00000506089 MYT1Q01538 1121 aa9.03□□□□□ -0.96
SMARCAD1-205ENST00000506089 PDIA6Q15084 440 aa9.03□□□□□ -0.96
SMARCAD1-205ENST00000506089 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
SMARCAD1-205ENST00000506089 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
SMARCAD1-205ENST00000506089 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
SMARCAD1-205ENST00000506089 PRIM1P49642 420 aaKnown RBP9□□□□□ -0.97
SMARCAD1-205ENST00000506089 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
SMARCAD1-205ENST00000506089 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
SMARCAD1-205ENST00000506089 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
SMARCAD1-205ENST00000506089 ARHGEF1Q92888 912 aaKnown RBP8.98□□□□□ -0.97
SMARCAD1-205ENST00000506089 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
SMARCAD1-205ENST00000506089 DGAT1O75907 488 aa8.97□□□□□ -0.97
SMARCAD1-205ENST00000506089 SLC19A1P41440 591 aa8.97□□□□□ -0.97
SMARCAD1-205ENST00000506089 RNF223E7ERA6 249 aa8.96□□□□□ -0.98
SMARCAD1-205ENST00000506089 ZPR1O75312 459 aa8.96□□□□□ -0.98
SMARCAD1-205ENST00000506089 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.98
SMARCAD1-205ENST00000506089 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
SMARCAD1-205ENST00000506089 CERKQ8TCT0 537 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms