RNA–Protein interactions for RNA: ENST00000505143.5

CAST-215, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-215ENST00000505143 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
CAST-215ENST00000505143 DDX12PQ92771 950 aa13.06□□□□□ -0.32
CAST-215ENST00000505143 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
CAST-215ENST00000505143 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
CAST-215ENST00000505143 COL9A1P20849 921 aa13.01□□□□□ -0.33
CAST-215ENST00000505143 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
CAST-215ENST00000505143 HCSTQ9UBK5 93 aa13□□□□□ -0.33
CAST-215ENST00000505143 NBR1Q14596 966 aa12.98□□□□□ -0.33
CAST-215ENST00000505143 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
CAST-215ENST00000505143 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
CAST-215ENST00000505143 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
CAST-215ENST00000505143 PROX2Q3B8N5 592 aa12.96□□□□□ -0.33
CAST-215ENST00000505143 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
CAST-215ENST00000505143 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
CAST-215ENST00000505143 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
CAST-215ENST00000505143 MAP3K7O43318 606 aa12.93□□□□□ -0.34
CAST-215ENST00000505143 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
CAST-215ENST00000505143 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
CAST-215ENST00000505143 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
CAST-215ENST00000505143 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
CAST-215ENST00000505143 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
CAST-215ENST00000505143 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
CAST-215ENST00000505143 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
CAST-215ENST00000505143 WNT2BQ93097 391 aa12.88□□□□□ -0.35
CAST-215ENST00000505143 KIAA1468Q9P260 1216 aa12.88□□□□□ -0.35
CAST-215ENST00000505143 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
CAST-215ENST00000505143 OSBPP22059 807 aa12.86□□□□□ -0.35
CAST-215ENST00000505143 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
CAST-215ENST00000505143 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
CAST-215ENST00000505143 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
CAST-215ENST00000505143 PTPN5P54829 565 aa12.84□□□□□ -0.35
CAST-215ENST00000505143 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
CAST-215ENST00000505143 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
CAST-215ENST00000505143 ANKK1Q8NFD2 765 aa12.8□□□□□ -0.36
CAST-215ENST00000505143 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
CAST-215ENST00000505143 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
CAST-215ENST00000505143 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
CAST-215ENST00000505143 SEPT9Q9UHD8 586 aaPredicted RBP12.79□□□□□ -0.36
CAST-215ENST00000505143 TSKSQ9UJT2 592 aa12.79□□□□□ -0.36
CAST-215ENST00000505143 PRSS12P56730 875 aa12.78□□□□□ -0.36
CAST-215ENST00000505143 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
CAST-215ENST00000505143 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
CAST-215ENST00000505143 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
CAST-215ENST00000505143 MLLT3P42568 568 aaPredicted RBP12.75□□□□□ -0.37
CAST-215ENST00000505143 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
CAST-215ENST00000505143 BCAMP50895 628 aa12.72□□□□□ -0.37
CAST-215ENST00000505143 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
CAST-215ENST00000505143 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
CAST-215ENST00000505143 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
CAST-215ENST00000505143 NPDC1Q9NQX5 325 aaPredicted RBP12.7□□□□□ -0.38
CAST-215ENST00000505143 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
CAST-215ENST00000505143 TATDN2Q93075 761 aa12.67□□□□□ -0.38
CAST-215ENST00000505143 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
CAST-215ENST00000505143 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.67□□□□□ -0.38
CAST-215ENST00000505143 SMAPO00193 183 aa12.66□□□□□ -0.38
CAST-215ENST00000505143 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
CAST-215ENST00000505143 SEMA3EO15041 775 aa12.65□□□□□ -0.38
CAST-215ENST00000505143 NYAP1Q6ZVC0 841 aa12.65□□□□□ -0.38
CAST-215ENST00000505143 TTC13Q8NBP0 860 aa12.65□□□□□ -0.38
CAST-215ENST00000505143 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
CAST-215ENST00000505143 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
CAST-215ENST00000505143 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
CAST-215ENST00000505143 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
CAST-215ENST00000505143 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
CAST-215ENST00000505143 TSR3Q9UJK0 312 aaKnown RBP12.63□□□□□ -0.39
CAST-215ENST00000505143 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
CAST-215ENST00000505143 PTGDRQ13258 359 aa12.6□□□□□ -0.39
CAST-215ENST00000505143 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
CAST-215ENST00000505143 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
CAST-215ENST00000505143 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
CAST-215ENST00000505143 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
CAST-215ENST00000505143 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
CAST-215ENST00000505143 PPP4CP60510 307 aa12.56□□□□□ -0.4
CAST-215ENST00000505143 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
CAST-215ENST00000505143 SMYD5Q6GMV2 418 aa12.54□□□□□ -0.4
CAST-215ENST00000505143 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
CAST-215ENST00000505143 EYA1Q99502 592 aa12.53□□□□□ -0.4
CAST-215ENST00000505143 FCHSD2O94868 740 aa12.51□□□□□ -0.41
CAST-215ENST00000505143 A0A0G2JS52 829 aa12.49□□□□□ -0.41
CAST-215ENST00000505143 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
CAST-215ENST00000505143 RNF40O75150 1001 aa12.47□□□□□ -0.41
CAST-215ENST00000505143 KCNC4Q03721 635 aa12.47□□□□□ -0.41
CAST-215ENST00000505143 RBM26Q5T8P6 1007 aaKnown RBP12.47□□□□□ -0.41
CAST-215ENST00000505143 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
CAST-215ENST00000505143 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
CAST-215ENST00000505143 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CAST-215ENST00000505143 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
CAST-215ENST00000505143 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
CAST-215ENST00000505143 RGS20O76081 388 aa12.43□□□□□ -0.42
CAST-215ENST00000505143 DNAJB2P25686 324 aa12.43□□□□□ -0.42
CAST-215ENST00000505143 HIC1Q14526 733 aa12.43□□□□□ -0.42
CAST-215ENST00000505143 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
CAST-215ENST00000505143 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
CAST-215ENST00000505143 APLP1P51693 650 aa12.39□□□□□ -0.43
CAST-215ENST00000505143 TMEM134Q9H6X4 195 aa12.39□□□□□ -0.43
CAST-215ENST00000505143 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
CAST-215ENST00000505143 GNPATO15228 680 aa12.37□□□□□ -0.43
CAST-215ENST00000505143 OATP04181 439 aa12.37□□□□□ -0.43
CAST-215ENST00000505143 MTRQ99707 1265 aa12.37□□□□□ -0.43
CAST-215ENST00000505143 GPR37O15354 613 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms