RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 FER1L4A9Z1Z3 1794 aa27.3■■□□□ 1.96
DDR1-254ENST00000504679 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
DDR1-254ENST00000504679 CNTLNQ9NXG0 1405 aa27.29■■□□□ 1.96
DDR1-254ENST00000504679 NAIPQ13075 1403 aa27.28■■□□□ 1.96
DDR1-254ENST00000504679 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
DDR1-254ENST00000504679 KANK1Q14678 1352 aa27.27■■□□□ 1.96
DDR1-254ENST00000504679 RIMS1Q86UR5 1692 aaKnown RBP27.27■■□□□ 1.96
DDR1-254ENST00000504679 RNF17Q9BXT8 1623 aaKnown RBP27.27■■□□□ 1.96
DDR1-254ENST00000504679 PTPRMP28827 1452 aa27.25■■□□□ 1.95
DDR1-254ENST00000504679 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
DDR1-254ENST00000504679 PLPPR3Q6T4P5 718 aa27.24■■□□□ 1.95
DDR1-254ENST00000504679 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
DDR1-254ENST00000504679 CEBPAP49715 358 aaPredicted RBP27.21■■□□□ 1.95
DDR1-254ENST00000504679 FAM135AQ9P2D6 1515 aa27.21■■□□□ 1.95
DDR1-254ENST00000504679 CLTCQ00610 1675 aaKnown RBP27.21■■□□□ 1.95
DDR1-254ENST00000504679 GCC2Q8IWJ2 1684 aa27.2■■□□□ 1.94
DDR1-254ENST00000504679 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
DDR1-254ENST00000504679 KDM5DQ9BY66 1539 aa27.19■■□□□ 1.94
DDR1-254ENST00000504679 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
DDR1-254ENST00000504679 SETD5Q9C0A6 1442 aa27.16■■□□□ 1.94
DDR1-254ENST00000504679 PRDM15P57071 1507 aaPredicted RBP27.16■■□□□ 1.94
DDR1-254ENST00000504679 MROH2AA6NES4 1674 aa27.16■■□□□ 1.94
DDR1-254ENST00000504679 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
DDR1-254ENST00000504679 NUP155O75694 1391 aa27.15■■□□□ 1.94
DDR1-254ENST00000504679 TRIM52Q96A61 297 aa27.14■■□□□ 1.94
DDR1-254ENST00000504679 ABCC3O15438 1527 aa27.14■■□□□ 1.94
DDR1-254ENST00000504679 ZC3H13Q5T200 1668 aaKnown RBP27.13■■□□□ 1.93
DDR1-254ENST00000504679 C3P01024 1663 aa27.11■■□□□ 1.93
DDR1-254ENST00000504679 UNC13BO14795 1591 aa27.11■■□□□ 1.93
DDR1-254ENST00000504679 CEP152O94986 1710 aa27.1■■□□□ 1.93
DDR1-254ENST00000504679 VWDEQ8N2E2 1590 aa27.09■■□□□ 1.93
DDR1-254ENST00000504679 LMTK2Q8IWU2 1503 aa27.07■■□□□ 1.92
DDR1-254ENST00000504679 HRCP23327 699 aa27.06■■□□□ 1.92
DDR1-254ENST00000504679 FBXO31Q5XUX0 539 aaPredicted RBP27.06■■□□□ 1.92
DDR1-254ENST00000504679 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
DDR1-254ENST00000504679 RAB3GAP2Q9H2M9 1393 aa27.04■■□□□ 1.92
DDR1-254ENST00000504679 ARHGAP31Q2M1Z3 1444 aa27.04■■□□□ 1.92
DDR1-254ENST00000504679 PZPP20742 1482 aa27.04■■□□□ 1.92
DDR1-254ENST00000504679 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
DDR1-254ENST00000504679 NPATQ14207 1427 aa27.03■■□□□ 1.92
DDR1-254ENST00000504679 IQGAP3Q86VI3 1631 aa27.02■■□□□ 1.92
DDR1-254ENST00000504679 CFAP65Q6ZU64 1925 aaKnown RBP27.01■■□□□ 1.91
DDR1-254ENST00000504679 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
DDR1-254ENST00000504679 TET3O43151 1660 aa26.98■■□□□ 1.91
DDR1-254ENST00000504679 EFCAB6Q5THR3 1501 aa26.96■■□□□ 1.91
DDR1-254ENST00000504679 TNRQ92752 1358 aa26.95■■□□□ 1.9
DDR1-254ENST00000504679 RPRD2Q5VT52 1461 aaKnown RBP26.94■■□□□ 1.9
DDR1-254ENST00000504679 MPHOSPH9Q99550 1183 aa26.94■■□□□ 1.9
DDR1-254ENST00000504679 PKD2Q13563 968 aa26.93■■□□□ 1.9
DDR1-254ENST00000504679 ERVK-7P63135 1459 aa26.92■■□□□ 1.9
DDR1-254ENST00000504679 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
DDR1-254ENST00000504679 PREX1Q8TCU6 1659 aa26.9■■□□□ 1.9
DDR1-254ENST00000504679 SPATA31D1Q6ZQQ2 1576 aa26.9■■□□□ 1.9
DDR1-254ENST00000504679 E9PCH4 1651 aa26.89■■□□□ 1.89
DDR1-254ENST00000504679 PCGF6Q9BYE7 350 aa26.88■■□□□ 1.89
DDR1-254ENST00000504679 NOS1P29475 1434 aa26.86■■□□□ 1.89
DDR1-254ENST00000504679 SLC52A1Q9NWF4 448 aa26.86■■□□□ 1.89
DDR1-254ENST00000504679 NLRP1Q9C000 1473 aa26.83■■□□□ 1.89
DDR1-254ENST00000504679 IDI1Q13907 227 aa26.82■■□□□ 1.88
DDR1-254ENST00000504679 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
DDR1-254ENST00000504679 MYO3AQ8NEV4 1616 aa26.8■■□□□ 1.88
DDR1-254ENST00000504679 FOXD1Q16676 465 aa26.8■■□□□ 1.88
DDR1-254ENST00000504679 STAG3Q9UJ98 1225 aa26.8■■□□□ 1.88
DDR1-254ENST00000504679 THEMISQ8N1K5 641 aaPredicted RBP26.79■■□□□ 1.88
DDR1-254ENST00000504679 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
DDR1-254ENST00000504679 HSPA2P54652 639 aa26.78■■□□□ 1.88
DDR1-254ENST00000504679 PTPRTO14522 1441 aa26.77■■□□□ 1.88
DDR1-254ENST00000504679 SYNMO15061 1565 aa26.76■■□□□ 1.87
DDR1-254ENST00000504679 CEP170BQ9Y4F5 1589 aaPredicted RBP26.76■■□□□ 1.87
DDR1-254ENST00000504679 SPHKAPQ2M3C7 1700 aa26.73■■□□□ 1.87
DDR1-254ENST00000504679 ZNF142P52746 1687 aaPredicted RBP26.73■■□□□ 1.87
DDR1-254ENST00000504679 UGGT1Q9NYU2 1555 aa26.72■■□□□ 1.87
DDR1-254ENST00000504679 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
DDR1-254ENST00000504679 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
DDR1-254ENST00000504679 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
DDR1-254ENST00000504679 TRPM2O94759 1503 aa26.67■■□□□ 1.86
DDR1-254ENST00000504679 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
DDR1-254ENST00000504679 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
DDR1-254ENST00000504679 KDM5AP29375 1690 aaKnown RBP26.63■■□□□ 1.85
DDR1-254ENST00000504679 HDGFP51858 240 aaKnown RBP26.62■■□□□ 1.85
DDR1-254ENST00000504679 CCDC144AA2RUR9 1427 aa26.62■■□□□ 1.85
DDR1-254ENST00000504679 ANKRD30BQ9BXX2 1392 aa26.61■■□□□ 1.85
DDR1-254ENST00000504679 EID1Q9Y6B2 187 aa26.61■■□□□ 1.85
DDR1-254ENST00000504679 DMRT2Q9Y5R5 561 aa26.6■■□□□ 1.85
DDR1-254ENST00000504679 CLTCL1P53675 1640 aa26.6■■□□□ 1.85
DDR1-254ENST00000504679 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
DDR1-254ENST00000504679 TMEM131LA2VDJ0 1609 aa26.59■■□□□ 1.85
DDR1-254ENST00000504679 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
DDR1-254ENST00000504679 TXNDC2Q86VQ3 553 aa26.59■■□□□ 1.85
DDR1-254ENST00000504679 NCKAP5LQ9HCH0 1330 aa26.59■■□□□ 1.85
DDR1-254ENST00000504679 KIF1BO60333 1816 aa26.58■■□□□ 1.84
DDR1-254ENST00000504679 TMEM2Q9UHN6 1383 aa26.58■■□□□ 1.84
DDR1-254ENST00000504679 DHX57Q6P158 1386 aaKnown RBP26.56■■□□□ 1.84
DDR1-254ENST00000504679 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.55■■□□□ 1.84
DDR1-254ENST00000504679 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
DDR1-254ENST00000504679 SLIT1O75093 1534 aa26.54■■□□□ 1.84
DDR1-254ENST00000504679 LTKP29376 864 aa26.53■■□□□ 1.84
DDR1-254ENST00000504679 ARHGAP23Q9P227 1491 aa26.53■■□□□ 1.84
DDR1-254ENST00000504679 STRCQ7RTU9 1775 aa26.53■■□□□ 1.84
DDR1-254ENST00000504679 RGL3Q3MIN7 710 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms