RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-207ENST00000503974 YEATS2Q9ULM3 1422 aa13.71□□□□□ -0.22
PDLIM5-207ENST00000503974 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-207ENST00000503974 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
PDLIM5-207ENST00000503974 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
PDLIM5-207ENST00000503974 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
PDLIM5-207ENST00000503974 DEKP35659 375 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-207ENST00000503974 NCOA1Q15788 1441 aa13.68□□□□□ -0.22
PDLIM5-207ENST00000503974 ATP10AO60312 1499 aa13.67□□□□□ -0.22
PDLIM5-207ENST00000503974 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
PDLIM5-207ENST00000503974 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
PDLIM5-207ENST00000503974 ANKRD30AQ9BXX3 1397 aa13.66□□□□□ -0.22
PDLIM5-207ENST00000503974 SIGLEC1Q9BZZ2 1709 aa13.66□□□□□ -0.22
PDLIM5-207ENST00000503974 DUOX2Q9NRD8 1548 aa13.65□□□□□ -0.22
PDLIM5-207ENST00000503974 A2MP01023 1474 aa13.65□□□□□ -0.23
PDLIM5-207ENST00000503974 AGLP35573 1532 aa13.64□□□□□ -0.23
PDLIM5-207ENST00000503974 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-207ENST00000503974 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
PDLIM5-207ENST00000503974 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
PDLIM5-207ENST00000503974 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
PDLIM5-207ENST00000503974 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-207ENST00000503974 PDE4CQ08493 712 aa13.63□□□□□ -0.23
PDLIM5-207ENST00000503974 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-207ENST00000503974 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
PDLIM5-207ENST00000503974 DHX29Q7Z478 1369 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-207ENST00000503974 CHIC2Q9UKJ5 165 aa13.62□□□□□ -0.23
PDLIM5-207ENST00000503974 NAIPQ13075 1403 aa13.61□□□□□ -0.23
PDLIM5-207ENST00000503974 ITGAEP38570 1179 aa13.61□□□□□ -0.23
PDLIM5-207ENST00000503974 ARXQ96QS3 562 aa13.6□□□□□ -0.23
PDLIM5-207ENST00000503974 RNF17Q9BXT8 1623 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-207ENST00000503974 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
PDLIM5-207ENST00000503974 ANKRD50Q9ULJ7 1429 aa13.58□□□□□ -0.24
PDLIM5-207ENST00000503974 MSH5O43196 834 aa13.57□□□□□ -0.24
PDLIM5-207ENST00000503974 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
PDLIM5-207ENST00000503974 MROH1Q8NDA8 1641 aa13.57□□□□□ -0.24
PDLIM5-207ENST00000503974 UNC13BO14795 1591 aa13.56□□□□□ -0.24
PDLIM5-207ENST00000503974 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-207ENST00000503974 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-207ENST00000503974 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
PDLIM5-207ENST00000503974 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-207ENST00000503974 FGD1P98174 961 aa13.54□□□□□ -0.24
PDLIM5-207ENST00000503974 SETD5Q9C0A6 1442 aa13.54□□□□□ -0.24
PDLIM5-207ENST00000503974 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
PDLIM5-207ENST00000503974 KDM5DQ9BY66 1539 aa13.52□□□□□ -0.24
PDLIM5-207ENST00000503974 ADAMTSL3P82987 1691 aa13.52□□□□□ -0.25
PDLIM5-207ENST00000503974 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-207ENST00000503974 IQGAP3Q86VI3 1631 aa13.49□□□□□ -0.25
PDLIM5-207ENST00000503974 KIF3BO15066 747 aa13.49□□□□□ -0.25
PDLIM5-207ENST00000503974 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
PDLIM5-207ENST00000503974 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
PDLIM5-207ENST00000503974 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
PDLIM5-207ENST00000503974 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
PDLIM5-207ENST00000503974 ABCC3O15438 1527 aa13.47□□□□□ -0.25
PDLIM5-207ENST00000503974 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
PDLIM5-207ENST00000503974 MADDQ8WXG6 1647 aa13.47□□□□□ -0.25
PDLIM5-207ENST00000503974 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-207ENST00000503974 CEP152O94986 1710 aa13.46□□□□□ -0.25
PDLIM5-207ENST00000503974 ZMYND15Q9H091 742 aa13.46□□□□□ -0.26
PDLIM5-207ENST00000503974 TET3O43151 1660 aa13.45□□□□□ -0.26
PDLIM5-207ENST00000503974 CLTCQ00610 1675 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-207ENST00000503974 CNTLNQ9NXG0 1405 aa13.44□□□□□ -0.26
PDLIM5-207ENST00000503974 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
PDLIM5-207ENST00000503974 PZPP20742 1482 aa13.44□□□□□ -0.26
PDLIM5-207ENST00000503974 GGT6Q6P531 493 aa13.43□□□□□ -0.26
PDLIM5-207ENST00000503974 KANK1Q14678 1352 aa13.43□□□□□ -0.26
PDLIM5-207ENST00000503974 EFCAB6Q5THR3 1501 aa13.43□□□□□ -0.26
PDLIM5-207ENST00000503974 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-207ENST00000503974 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-207ENST00000503974 NUP155O75694 1391 aa13.42□□□□□ -0.26
PDLIM5-207ENST00000503974 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
PDLIM5-207ENST00000503974 AAMPQ13685 434 aa13.41□□□□□ -0.26
PDLIM5-207ENST00000503974 MLECQ14165 292 aa13.41□□□□□ -0.26
PDLIM5-207ENST00000503974 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
PDLIM5-207ENST00000503974 C3P01024 1663 aa13.4□□□□□ -0.26
PDLIM5-207ENST00000503974 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
PDLIM5-207ENST00000503974 E9PCH4 1651 aa13.4□□□□□ -0.27
PDLIM5-207ENST00000503974 IL27Q8NEV9 243 aa13.4□□□□□ -0.27
PDLIM5-207ENST00000503974 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
PDLIM5-207ENST00000503974 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-207ENST00000503974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■□□□□ 11
PDLIM5-207ENST00000503974 NPATQ14207 1427 aa13.38□□□□□ -0.27
PDLIM5-207ENST00000503974 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
PDLIM5-207ENST00000503974 PTPRMP28827 1452 aa13.36□□□□□ -0.27
PDLIM5-207ENST00000503974 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
PDLIM5-207ENST00000503974 SPATA31D1Q6ZQQ2 1576 aa13.36□□□□□ -0.27
PDLIM5-207ENST00000503974 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-207ENST00000503974 PREX1Q8TCU6 1659 aa13.36□□□□□ -0.27
PDLIM5-207ENST00000503974 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
PDLIM5-207ENST00000503974 RBM10P98175 930 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-207ENST00000503974 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-207ENST00000503974 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
PDLIM5-207ENST00000503974 NOS1P29475 1434 aa13.33□□□□□ -0.28
PDLIM5-207ENST00000503974 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
PDLIM5-207ENST00000503974 SPHKAPQ2M3C7 1700 aa13.33□□□□□ -0.28
PDLIM5-207ENST00000503974 TAF7LQ5H9L4 462 aa13.33□□□□□ -0.28
PDLIM5-207ENST00000503974 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
PDLIM5-207ENST00000503974 MIER1Q8N108 512 aa13.32□□□□□ -0.28
PDLIM5-207ENST00000503974 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-207ENST00000503974 PTPRTO14522 1441 aa13.32□□□□□ -0.28
PDLIM5-207ENST00000503974 SYNMO15061 1565 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms