RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 NAIPQ13075 1403 aa20.01■□□□□ 0.79
PRDM2-213ENST00000503842 RAPGEF3O95398 923 aa20■□□□□ 0.79
PRDM2-213ENST00000503842 PLXNC1O60486 1568 aa20■□□□□ 0.79
PRDM2-213ENST00000503842 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
PRDM2-213ENST00000503842 MLH3Q9UHC1 1453 aa19.99■□□□□ 0.79
PRDM2-213ENST00000503842 ATP7AQ04656 1500 aa19.98■□□□□ 0.79
PRDM2-213ENST00000503842 ZMYM4Q5VZL5 1548 aa19.98■□□□□ 0.79
PRDM2-213ENST00000503842 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
PRDM2-213ENST00000503842 SETD5Q9C0A6 1442 aa19.98■□□□□ 0.79
PRDM2-213ENST00000503842 HECW2Q9P2P5 1572 aa19.96■□□□□ 0.79
PRDM2-213ENST00000503842 KIDINS220Q9ULH0 1771 aa19.96■□□□□ 0.79
PRDM2-213ENST00000503842 KIF15Q9NS87 1388 aa19.95■□□□□ 0.79
PRDM2-213ENST00000503842 ZNF219Q9P2Y4 722 aaPredicted RBP19.94■□□□□ 0.78
PRDM2-213ENST00000503842 ATF5Q9Y2D1 282 aaPredicted RBP19.94■□□□□ 0.78
PRDM2-213ENST00000503842 RAB3GAP2Q9H2M9 1393 aa19.93■□□□□ 0.78
PRDM2-213ENST00000503842 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
PRDM2-213ENST00000503842 DUOX2Q9NRD8 1548 aa19.91■□□□□ 0.78
PRDM2-213ENST00000503842 HRCP23327 699 aa19.9■□□□□ 0.78
PRDM2-213ENST00000503842 ANKRD50Q9ULJ7 1429 aa19.9■□□□□ 0.78
PRDM2-213ENST00000503842 KDM6BO15054 1643 aa19.9■□□□□ 0.78
PRDM2-213ENST00000503842 ABCA6Q8N139 1617 aa19.89■□□□□ 0.77
PRDM2-213ENST00000503842 DIP2CQ9Y2E4 1556 aa19.87■□□□□ 0.77
PRDM2-213ENST00000503842 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
PRDM2-213ENST00000503842 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
PRDM2-213ENST00000503842 ERBINQ96RT1 1412 aa19.86■□□□□ 0.77
PRDM2-213ENST00000503842 DHX29Q7Z478 1369 aaKnown RBP19.85■□□□□ 0.77
PRDM2-213ENST00000503842 A2MP01023 1474 aa19.84■□□□□ 0.77
PRDM2-213ENST00000503842 ARHGEF40Q8TER5 1519 aa19.83■□□□□ 0.77
PRDM2-213ENST00000503842 ATP10AO60312 1499 aa19.8■□□□□ 0.76
PRDM2-213ENST00000503842 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
PRDM2-213ENST00000503842 REREQ9P2R6 1566 aa19.8■□□□□ 0.76
PRDM2-213ENST00000503842 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
PRDM2-213ENST00000503842 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
PRDM2-213ENST00000503842 UNC13BO14795 1591 aa19.76■□□□□ 0.75
PRDM2-213ENST00000503842 KDM5DQ9BY66 1539 aa19.75■□□□□ 0.75
PRDM2-213ENST00000503842 DEPDC5O75140 1603 aa19.74■□□□□ 0.75
PRDM2-213ENST00000503842 DHX57Q6P158 1386 aaKnown RBP19.73■□□□□ 0.75
PRDM2-213ENST00000503842 AGLP35573 1532 aa19.73■□□□□ 0.75
PRDM2-213ENST00000503842 RNF17Q9BXT8 1623 aaKnown RBP19.73■□□□□ 0.75
PRDM2-213ENST00000503842 KIF3BO15066 747 aa19.72■□□□□ 0.75
PRDM2-213ENST00000503842 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
PRDM2-213ENST00000503842 MROH1Q8NDA8 1641 aa19.71■□□□□ 0.75
PRDM2-213ENST00000503842 PZPP20742 1482 aa19.71■□□□□ 0.75
PRDM2-213ENST00000503842 SIGLEC1Q9BZZ2 1709 aa19.7■□□□□ 0.74
PRDM2-213ENST00000503842 PRDM15P57071 1507 aaPredicted RBP19.7■□□□□ 0.74
PRDM2-213ENST00000503842 NUP155O75694 1391 aa19.7■□□□□ 0.74
PRDM2-213ENST00000503842 VWDEQ8N2E2 1590 aa19.68■□□□□ 0.74
PRDM2-213ENST00000503842 IQGAP3Q86VI3 1631 aa19.67■□□□□ 0.74
PRDM2-213ENST00000503842 ABCB7O75027 752 aa19.66■□□□□ 0.74
PRDM2-213ENST00000503842 FAM135AQ9P2D6 1515 aa19.66■□□□□ 0.74
PRDM2-213ENST00000503842 MPHOSPH9Q99550 1183 aa19.65■□□□□ 0.74
PRDM2-213ENST00000503842 KANK1Q14678 1352 aa19.62■□□□□ 0.73
PRDM2-213ENST00000503842 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
PRDM2-213ENST00000503842 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
PRDM2-213ENST00000503842 GGT6Q6P531 493 aa19.61■□□□□ 0.73
PRDM2-213ENST00000503842 ABCC3O15438 1527 aa19.59■□□□□ 0.73
PRDM2-213ENST00000503842 CLSPNQ9HAW4 1339 aa19.58■□□□□ 0.73
PRDM2-213ENST00000503842 POLA2Q14181 598 aa19.58■□□□□ 0.72
PRDM2-213ENST00000503842 TET3O43151 1660 aa19.58■□□□□ 0.72
PRDM2-213ENST00000503842 DSG3P32926 999 aa19.57■□□□□ 0.72
PRDM2-213ENST00000503842 PKD2Q13563 968 aa19.57■□□□□ 0.72
PRDM2-213ENST00000503842 CEP152O94986 1710 aa19.56■□□□□ 0.72
PRDM2-213ENST00000503842 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
PRDM2-213ENST00000503842 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
PRDM2-213ENST00000503842 EFCAB6Q5THR3 1501 aa19.54■□□□□ 0.72
PRDM2-213ENST00000503842 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
PRDM2-213ENST00000503842 MLECQ14165 292 aa19.52■□□□□ 0.72
PRDM2-213ENST00000503842 ANKRD30BQ9BXX2 1392 aa19.52■□□□□ 0.72
PRDM2-213ENST00000503842 E9PCH4 1651 aa19.52■□□□□ 0.71
PRDM2-213ENST00000503842 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
PRDM2-213ENST00000503842 ARHGAP31Q2M1Z3 1444 aa19.5■□□□□ 0.71
PRDM2-213ENST00000503842 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
PRDM2-213ENST00000503842 NPATQ14207 1427 aa19.48■□□□□ 0.71
PRDM2-213ENST00000503842 PLA2R1Q13018 1463 aa19.48■□□□□ 0.71
PRDM2-213ENST00000503842 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
PRDM2-213ENST00000503842 PTPRTO14522 1441 aa19.46■□□□□ 0.71
PRDM2-213ENST00000503842 CNTLNQ9NXG0 1405 aa19.46■□□□□ 0.71
PRDM2-213ENST00000503842 SIN3AQ96ST3 1273 aa19.43■□□□□ 0.7
PRDM2-213ENST00000503842 SPHKAPQ2M3C7 1700 aa19.42■□□□□ 0.7
PRDM2-213ENST00000503842 TRPM2O94759 1503 aa19.42■□□□□ 0.7
PRDM2-213ENST00000503842 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
PRDM2-213ENST00000503842 ADAMTSL3P82987 1691 aa19.42■□□□□ 0.7
PRDM2-213ENST00000503842 FER1L4A9Z1Z3 1794 aa19.42■□□□□ 0.7
PRDM2-213ENST00000503842 NOS1P29475 1434 aa19.42■□□□□ 0.7
PRDM2-213ENST00000503842 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
PRDM2-213ENST00000503842 ZMYM3Q14202 1370 aa19.4■□□□□ 0.7
PRDM2-213ENST00000503842 MADDQ8WXG6 1647 aa19.39■□□□□ 0.69
PRDM2-213ENST00000503842 ERVK-7P63135 1459 aa19.38■□□□□ 0.69
PRDM2-213ENST00000503842 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
PRDM2-213ENST00000503842 PREX1Q8TCU6 1659 aa19.37■□□□□ 0.69
PRDM2-213ENST00000503842 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
PRDM2-213ENST00000503842 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
PRDM2-213ENST00000503842 SYNMO15061 1565 aa19.36■□□□□ 0.69
PRDM2-213ENST00000503842 SPATA31D1Q6ZQQ2 1576 aa19.36■□□□□ 0.69
PRDM2-213ENST00000503842 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
PRDM2-213ENST00000503842 CLTCL1P53675 1640 aa19.35■□□□□ 0.69
PRDM2-213ENST00000503842 RIMS1Q86UR5 1692 aaKnown RBP19.33■□□□□ 0.69
PRDM2-213ENST00000503842 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
PRDM2-213ENST00000503842 ZBTB12Q9Y330 459 aaPredicted RBP19.33■□□□□ 0.68
PRDM2-213ENST00000503842 C3P01024 1663 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms