RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
PSPC1-205ENST00000497722 FOSBP53539 338 aa9.07□□□□□ -0.96
PSPC1-205ENST00000497722 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
PSPC1-205ENST00000497722 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
PSPC1-205ENST00000497722 ANKK1Q8NFD2 765 aa9.03□□□□□ -0.96
PSPC1-205ENST00000497722 DPYSL4O14531 572 aa9.01□□□□□ -0.97
PSPC1-205ENST00000497722 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
PSPC1-205ENST00000497722 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
PSPC1-205ENST00000497722 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
PSPC1-205ENST00000497722 PCDHGA10Q9Y5H3 936 aa8.99□□□□□ -0.97
PSPC1-205ENST00000497722 E2F4Q16254 413 aa8.98□□□□□ -0.97
PSPC1-205ENST00000497722 TRAF7Q6Q0C0 670 aa8.98□□□□□ -0.97
PSPC1-205ENST00000497722 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
PSPC1-205ENST00000497722 KCNC4Q03721 635 aa8.97□□□□□ -0.97
PSPC1-205ENST00000497722 ZDHHC16Q969W1 377 aa8.97□□□□□ -0.97
PSPC1-205ENST00000497722 PHF14O94880 888 aa8.96□□□□□ -0.98
PSPC1-205ENST00000497722 PDIA6Q15084 440 aa8.96□□□□□ -0.98
PSPC1-205ENST00000497722 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
PSPC1-205ENST00000497722 GFRA3O60609 400 aa8.94□□□□□ -0.98
PSPC1-205ENST00000497722 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
PSPC1-205ENST00000497722 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
PSPC1-205ENST00000497722 LCE2BO14633 110 aa8.93□□□□□ -0.98
PSPC1-205ENST00000497722 BCAMP50895 628 aa8.93□□□□□ -0.98
PSPC1-205ENST00000497722 LAPTM4BQ86VI4 370 aa8.93□□□□□ -0.98
PSPC1-205ENST00000497722 SPDYE16A6NNV3 312 aaPredicted RBP8.92□□□□□ -0.98
PSPC1-205ENST00000497722 TYW1BQ6NUM6 668 aa8.92□□□□□ -0.98
PSPC1-205ENST00000497722 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
PSPC1-205ENST00000497722 PLCB2Q00722 1185 aa8.91□□□□□ -0.98
PSPC1-205ENST00000497722 FBXW7Q969H0 707 aa8.91□□□□□ -0.98
PSPC1-205ENST00000497722 EPAS1Q99814 870 aa8.91□□□□□ -0.98
PSPC1-205ENST00000497722 COL9A1P20849 921 aa8.89□□□□□ -0.99
PSPC1-205ENST00000497722 NRG2O14511 850 aaPredicted RBP8.88□□□□□ -0.99
PSPC1-205ENST00000497722 DDX12PQ92771 950 aa8.88□□□□□ -0.99
PSPC1-205ENST00000497722 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
PSPC1-205ENST00000497722 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
PSPC1-205ENST00000497722 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
PSPC1-205ENST00000497722 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
PSPC1-205ENST00000497722 C6orf132Q5T0Z8 1188 aa8.86□□□□□ -0.99
PSPC1-205ENST00000497722 EN1Q05925 392 aaPredicted RBP8.84□□□□□ -0.99
PSPC1-205ENST00000497722 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
PSPC1-205ENST00000497722 ARHGEF1Q92888 912 aaKnown RBP8.83□□□□□ -1
PSPC1-205ENST00000497722 OSBPP22059 807 aa8.82□□□□□ -1
PSPC1-205ENST00000497722 NBR1Q14596 966 aa8.82□□□□□ -1
PSPC1-205ENST00000497722 ZNF787Q6DD87 383 aa8.82□□□□□ -1
PSPC1-205ENST00000497722 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
PSPC1-205ENST00000497722 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
PSPC1-205ENST00000497722 ONECUT3O60422 494 aaPredicted RBP8.8□□□□□ -1
PSPC1-205ENST00000497722 TSR1Q2NL82 804 aaKnown RBP8.8□□□□□ -1
PSPC1-205ENST00000497722 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
PSPC1-205ENST00000497722 KIAA1468Q9P260 1216 aa8.8□□□□□ -1
PSPC1-205ENST00000497722 LRCH3Q96II8 777 aa8.79□□□□□ -1
PSPC1-205ENST00000497722 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.79□□□□□ -1
PSPC1-205ENST00000497722 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
PSPC1-205ENST00000497722 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
PSPC1-205ENST00000497722 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
PSPC1-205ENST00000497722 V9GY48 417 aaPredicted RBP8.78□□□□□ -1
PSPC1-205ENST00000497722 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
PSPC1-205ENST00000497722 TRIM6-TRIM34B2RNG4 842 aa8.76□□□□□ -1.01
PSPC1-205ENST00000497722 MAP3K7O43318 606 aa8.76□□□□□ -1.01
PSPC1-205ENST00000497722 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
PSPC1-205ENST00000497722 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
PSPC1-205ENST00000497722 TSKSQ9UJT2 592 aa8.74□□□□□ -1.01
PSPC1-205ENST00000497722 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
PSPC1-205ENST00000497722 NPDC1Q9NQX5 325 aaPredicted RBP8.73□□□□□ -1.01
PSPC1-205ENST00000497722 FAM198AQ9UFP1 575 aa8.73□□□□□ -1.01
PSPC1-205ENST00000497722 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
PSPC1-205ENST00000497722 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
PSPC1-205ENST00000497722 CERKQ8TCT0 537 aa8.71□□□□□ -1.02
PSPC1-205ENST00000497722 PDZRN3Q9UPQ7 1066 aa8.71□□□□□ -1.02
PSPC1-205ENST00000497722 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
PSPC1-205ENST00000497722 PRSS12P56730 875 aa8.7□□□□□ -1.02
PSPC1-205ENST00000497722 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
PSPC1-205ENST00000497722 CDCA7LQ96GN5 454 aa8.7□□□□□ -1.02
PSPC1-205ENST00000497722 PPP4CP60510 307 aa8.69□□□□□ -1.02
PSPC1-205ENST00000497722 TJAP1Q5JTD0 557 aa8.69□□□□□ -1.02
PSPC1-205ENST00000497722 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
PSPC1-205ENST00000497722 HAP1P54257 671 aaPredicted RBP8.68□□□□□ -1.02
PSPC1-205ENST00000497722 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
PSPC1-205ENST00000497722 SEMA3EO15041 775 aa8.67□□□□□ -1.02
PSPC1-205ENST00000497722 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
PSPC1-205ENST00000497722 PACS2Q86VP3 889 aa8.66□□□□□ -1.02
PSPC1-205ENST00000497722 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
PSPC1-205ENST00000497722 MTRQ99707 1265 aa8.65□□□□□ -1.02
PSPC1-205ENST00000497722 TESPA1A2RU30 521 aaPredicted RBP8.64□□□□□ -1.03
PSPC1-205ENST00000497722 PTGDRQ13258 359 aa8.62□□□□□ -1.03
PSPC1-205ENST00000497722 TATDN2Q93075 761 aa8.62□□□□□ -1.03
PSPC1-205ENST00000497722 SMAPO00193 183 aa8.61□□□□□ -1.03
PSPC1-205ENST00000497722 GGCXP38435 758 aa8.61□□□□□ -1.03
PSPC1-205ENST00000497722 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
PSPC1-205ENST00000497722 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
PSPC1-205ENST00000497722 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
PSPC1-205ENST00000497722 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
PSPC1-205ENST00000497722 NUDT18Q6ZVK8 323 aa8.58□□□□□ -1.04
PSPC1-205ENST00000497722 EYA1Q99502 592 aa8.58□□□□□ -1.04
PSPC1-205ENST00000497722 PKDCCQ504Y2 493 aa8.57□□□□□ -1.04
PSPC1-205ENST00000497722 SAMD7Q7Z3H4 446 aa8.57□□□□□ -1.04
PSPC1-205ENST00000497722 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
PSPC1-205ENST00000497722 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
PSPC1-205ENST00000497722 GPR37O15354 613 aa8.54□□□□□ -1.04
PSPC1-205ENST00000497722 RBM26Q5T8P6 1007 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms