RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
PBX3-211ENST00000497091 WASHC2CQ9Y4E1 1318 aa28.88■■■□□ 2.21
PBX3-211ENST00000497091 RIMS1Q86UR5 1692 aaKnown RBP28.87■■■□□ 2.21
PBX3-211ENST00000497091 ERBINQ96RT1 1412 aa28.86■■■□□ 2.21
PBX3-211ENST00000497091 FER1L4A9Z1Z3 1794 aa28.85■■■□□ 2.21
PBX3-211ENST00000497091 ZMYM3Q14202 1370 aa28.84■■■□□ 2.21
PBX3-211ENST00000497091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.83■■■□□ 2.21
PBX3-211ENST00000497091 ANKRD50Q9ULJ7 1429 aa28.81■■■□□ 2.2
PBX3-211ENST00000497091 EIF2AK4Q9P2K8 1649 aaKnown RBP28.78■■■□□ 2.2
PBX3-211ENST00000497091 KANK1Q14678 1352 aa28.75■■■□□ 2.19
PBX3-211ENST00000497091 RNF17Q9BXT8 1623 aaKnown RBP28.72■■■□□ 2.19
PBX3-211ENST00000497091 KDM5DQ9BY66 1539 aa28.7■■■□□ 2.19
PBX3-211ENST00000497091 FAM135AQ9P2D6 1515 aa28.7■■■□□ 2.19
PBX3-211ENST00000497091 CLTCQ00610 1675 aaKnown RBP28.7■■■□□ 2.18
PBX3-211ENST00000497091 LMTK3Q96Q04 1460 aa28.66■■■□□ 2.18
PBX3-211ENST00000497091 FBXO31Q5XUX0 539 aaPredicted RBP28.66■■■□□ 2.18
PBX3-211ENST00000497091 MROH2AA6NES4 1674 aa28.66■■■□□ 2.18
PBX3-211ENST00000497091 C3P01024 1663 aa28.65■■■□□ 2.18
PBX3-211ENST00000497091 ABCC3O15438 1527 aa28.64■■■□□ 2.18
PBX3-211ENST00000497091 MROH1Q8NDA8 1641 aa28.64■■■□□ 2.18
PBX3-211ENST00000497091 NAIPQ13075 1403 aa28.63■■■□□ 2.17
PBX3-211ENST00000497091 NPATQ14207 1427 aa28.63■■■□□ 2.17
PBX3-211ENST00000497091 PRDM15P57071 1507 aaPredicted RBP28.62■■■□□ 2.17
PBX3-211ENST00000497091 HFM1A2PYH4 1435 aa28.6■■■□□ 2.17
PBX3-211ENST00000497091 DEPDC5O75140 1603 aa28.59■■■□□ 2.17
PBX3-211ENST00000497091 PZPP20742 1482 aa28.59■■■□□ 2.17
PBX3-211ENST00000497091 NUP155O75694 1391 aa28.58■■■□□ 2.17
PBX3-211ENST00000497091 UHRF1BP1Q6BDS2 1440 aa28.56■■■□□ 2.16
PBX3-211ENST00000497091 FBXO41Q8TF61 875 aa28.56■■■□□ 2.16
PBX3-211ENST00000497091 ZC3H13Q5T200 1668 aaKnown RBP28.54■■■□□ 2.16
PBX3-211ENST00000497091 HSPA2P54652 639 aa28.54■■■□□ 2.16
PBX3-211ENST00000497091 SETD1BQ9UPS6 1966 aaKnown RBP28.53■■■□□ 2.16
PBX3-211ENST00000497091 ARHGAP31Q2M1Z3 1444 aa28.53■■■□□ 2.16
PBX3-211ENST00000497091 TNRQ92752 1358 aa28.53■■■□□ 2.16
PBX3-211ENST00000497091 TRIM52Q96A61 297 aa28.53■■■□□ 2.16
PBX3-211ENST00000497091 VWDEQ8N2E2 1590 aa28.53■■■□□ 2.16
PBX3-211ENST00000497091 LMTK2Q8IWU2 1503 aa28.52■■■□□ 2.16
PBX3-211ENST00000497091 CEP152O94986 1710 aa28.49■■■□□ 2.15
PBX3-211ENST00000497091 UNC13BO14795 1591 aa28.47■■■□□ 2.15
PBX3-211ENST00000497091 CAMSAP1Q5T5Y3 1602 aa28.47■■■□□ 2.15
PBX3-211ENST00000497091 PREX1Q8TCU6 1659 aa28.45■■■□□ 2.15
PBX3-211ENST00000497091 SETD5Q9C0A6 1442 aa28.44■■■□□ 2.14
PBX3-211ENST00000497091 ERVK-7P63135 1459 aa28.44■■■□□ 2.14
PBX3-211ENST00000497091 GCC2Q8IWJ2 1684 aa28.44■■■□□ 2.14
PBX3-211ENST00000497091 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
PBX3-211ENST00000497091 SPATA31D1Q6ZQQ2 1576 aa28.4■■■□□ 2.14
PBX3-211ENST00000497091 EFCAB6Q5THR3 1501 aa28.39■■■□□ 2.14
PBX3-211ENST00000497091 THEMISQ8N1K5 641 aaPredicted RBP28.38■■■□□ 2.13
PBX3-211ENST00000497091 SLC4A1APQ9BWU0 796 aaKnown RBP28.38■■■□□ 2.13
PBX3-211ENST00000497091 RPRD2Q5VT52 1461 aaKnown RBP28.38■■■□□ 2.13
PBX3-211ENST00000497091 NLRP1Q9C000 1473 aa28.38■■■□□ 2.13
PBX3-211ENST00000497091 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
PBX3-211ENST00000497091 A2ML1A8K2U0 1454 aa28.37■■■□□ 2.13
PBX3-211ENST00000497091 SLC52A1Q9NWF4 448 aa28.36■■■□□ 2.13
PBX3-211ENST00000497091 TET3O43151 1660 aa28.35■■■□□ 2.13
PBX3-211ENST00000497091 IDI1Q13907 227 aa28.35■■■□□ 2.13
PBX3-211ENST00000497091 NOS1P29475 1434 aa28.35■■■□□ 2.13
PBX3-211ENST00000497091 MYO3AQ8NEV4 1616 aa28.33■■■□□ 2.13
PBX3-211ENST00000497091 PKD2Q13563 968 aa28.33■■■□□ 2.13
PBX3-211ENST00000497091 RAB3GAP2Q9H2M9 1393 aa28.33■■■□□ 2.13
PBX3-211ENST00000497091 CEP170BQ9Y4F5 1589 aaPredicted RBP28.33■■■□□ 2.12
PBX3-211ENST00000497091 CFAP65Q6ZU64 1925 aaKnown RBP28.32■■■□□ 2.12
PBX3-211ENST00000497091 STAG3Q9UJ98 1225 aa28.32■■■□□ 2.12
PBX3-211ENST00000497091 HRCP23327 699 aa28.31■■■□□ 2.12
PBX3-211ENST00000497091 TRIM26Q12899 539 aaPredicted RBP28.31■■■□□ 2.12
PBX3-211ENST00000497091 MPHOSPH9Q99550 1183 aa28.3■■■□□ 2.12
PBX3-211ENST00000497091 DMRT2Q9Y5R5 561 aa28.29■■■□□ 2.12
PBX3-211ENST00000497091 UGGT1Q9NYU2 1555 aa28.26■■■□□ 2.11
PBX3-211ENST00000497091 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
PBX3-211ENST00000497091 E9PCH4 1651 aa28.24■■■□□ 2.11
PBX3-211ENST00000497091 ZNF142P52746 1687 aaPredicted RBP28.24■■■□□ 2.11
PBX3-211ENST00000497091 ANKLE2Q86XL3 938 aa28.24■■■□□ 2.11
PBX3-211ENST00000497091 CERKQ8TCT0 537 aa28.24■■■□□ 2.11
PBX3-211ENST00000497091 SYNMO15061 1565 aa28.21■■■□□ 2.11
PBX3-211ENST00000497091 CHGAP10645 457 aaKnown RBP28.2■■■□□ 2.1
PBX3-211ENST00000497091 FOXD1Q16676 465 aa28.2■■■□□ 2.1
PBX3-211ENST00000497091 PLA2R1Q13018 1463 aa28.2■■■□□ 2.1
PBX3-211ENST00000497091 PTPRTO14522 1441 aa28.19■■■□□ 2.1
PBX3-211ENST00000497091 STRCQ7RTU9 1775 aa28.17■■■□□ 2.1
PBX3-211ENST00000497091 TXNDC2Q86VQ3 553 aa28.15■■■□□ 2.1
PBX3-211ENST00000497091 EID1Q9Y6B2 187 aa28.15■■■□□ 2.1
PBX3-211ENST00000497091 PIK3C2BO00750 1634 aa28.13■■■□□ 2.09
PBX3-211ENST00000497091 TMEM2Q9UHN6 1383 aa28.11■■■□□ 2.09
PBX3-211ENST00000497091 LTKP29376 864 aa28.11■■■□□ 2.09
PBX3-211ENST00000497091 HDGFP51858 240 aaKnown RBP28.11■■■□□ 2.09
PBX3-211ENST00000497091 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
PBX3-211ENST00000497091 ADGRB3O60242 1522 aa28.06■■■□□ 2.08
PBX3-211ENST00000497091 ARHGAP23Q9P227 1491 aa28.05■■■□□ 2.08
PBX3-211ENST00000497091 SPHKAPQ2M3C7 1700 aa28.04■■■□□ 2.08
PBX3-211ENST00000497091 SLIT1O75093 1534 aa28.04■■■□□ 2.08
PBX3-211ENST00000497091 TRPM2O94759 1503 aa28.04■■■□□ 2.08
PBX3-211ENST00000497091 ZNF326Q5BKZ1 582 aaKnown RBP28.04■■■□□ 2.08
PBX3-211ENST00000497091 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
PBX3-211ENST00000497091 KDM5AP29375 1690 aaKnown RBP28.03■■■□□ 2.08
PBX3-211ENST00000497091 SCAF11Q99590 1463 aaKnown RBP28.02■■■□□ 2.08
PBX3-211ENST00000497091 NPHP4O75161 1426 aaPredicted RBP28.01■■■□□ 2.08
PBX3-211ENST00000497091 PPP1R15AO75807 674 aaPredicted RBP28.01■■■□□ 2.07
PBX3-211ENST00000497091 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
PBX3-211ENST00000497091 MED14O60244 1454 aa28■■■□□ 2.07
PBX3-211ENST00000497091 BCANQ96GW7 911 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms