RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 ADAMTSL3P82987 1691 aa23.72■■□□□ 1.39
PMF1-205ENST00000497069 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
PMF1-205ENST00000497069 RNF17Q9BXT8 1623 aaKnown RBP23.71■■□□□ 1.39
PMF1-205ENST00000497069 KANK1Q14678 1352 aa23.71■■□□□ 1.39
PMF1-205ENST00000497069 WASHC2CQ9Y4E1 1318 aa23.7■■□□□ 1.38
PMF1-205ENST00000497069 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
PMF1-205ENST00000497069 CNTLNQ9NXG0 1405 aa23.68■■□□□ 1.38
PMF1-205ENST00000497069 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
PMF1-205ENST00000497069 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
PMF1-205ENST00000497069 FAM135AQ9P2D6 1515 aa23.66■■□□□ 1.38
PMF1-205ENST00000497069 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
PMF1-205ENST00000497069 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
PMF1-205ENST00000497069 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
PMF1-205ENST00000497069 RIMS1Q86UR5 1692 aaKnown RBP23.64■■□□□ 1.38
PMF1-205ENST00000497069 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.38
PMF1-205ENST00000497069 UNC13BO14795 1591 aa23.61■■□□□ 1.37
PMF1-205ENST00000497069 CLTCQ00610 1675 aaKnown RBP23.61■■□□□ 1.37
PMF1-205ENST00000497069 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
PMF1-205ENST00000497069 TRIM52Q96A61 297 aa23.61■■□□□ 1.37
PMF1-205ENST00000497069 NUP155O75694 1391 aa23.61■■□□□ 1.37
PMF1-205ENST00000497069 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
PMF1-205ENST00000497069 PTPRMP28827 1452 aa23.6■■□□□ 1.37
PMF1-205ENST00000497069 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
PMF1-205ENST00000497069 ABCC3O15438 1527 aa23.59■■□□□ 1.37
PMF1-205ENST00000497069 ZMYM3Q14202 1370 aa23.59■■□□□ 1.37
PMF1-205ENST00000497069 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
PMF1-205ENST00000497069 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
PMF1-205ENST00000497069 VWDEQ8N2E2 1590 aa23.57■■□□□ 1.36
PMF1-205ENST00000497069 CEBPAP49715 358 aaPredicted RBP23.55■■□□□ 1.36
PMF1-205ENST00000497069 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
PMF1-205ENST00000497069 CEP152O94986 1710 aa23.54■■□□□ 1.36
PMF1-205ENST00000497069 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
PMF1-205ENST00000497069 IQGAP3Q86VI3 1631 aa23.52■■□□□ 1.36
PMF1-205ENST00000497069 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
PMF1-205ENST00000497069 HRCP23327 699 aa23.51■■□□□ 1.35
PMF1-205ENST00000497069 C3P01024 1663 aa23.51■■□□□ 1.35
PMF1-205ENST00000497069 PCGF6Q9BYE7 350 aa23.49■■□□□ 1.35
PMF1-205ENST00000497069 PZPP20742 1482 aa23.49■■□□□ 1.35
PMF1-205ENST00000497069 SLC4A1APQ9BWU0 796 aaKnown RBP23.48■■□□□ 1.35
PMF1-205ENST00000497069 ARHGAP31Q2M1Z3 1444 aa23.48■■□□□ 1.35
PMF1-205ENST00000497069 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
PMF1-205ENST00000497069 TET3O43151 1660 aa23.47■■□□□ 1.35
PMF1-205ENST00000497069 NPATQ14207 1427 aa23.45■■□□□ 1.34
PMF1-205ENST00000497069 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
PMF1-205ENST00000497069 RPRD2Q5VT52 1461 aaKnown RBP23.43■■□□□ 1.34
PMF1-205ENST00000497069 PKD2Q13563 968 aa23.41■■□□□ 1.34
PMF1-205ENST00000497069 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
PMF1-205ENST00000497069 ERVK-7P63135 1459 aa23.4■■□□□ 1.34
PMF1-205ENST00000497069 TNRQ92752 1358 aa23.4■■□□□ 1.34
PMF1-205ENST00000497069 SPATA31D1Q6ZQQ2 1576 aa23.37■■□□□ 1.33
PMF1-205ENST00000497069 E9PCH4 1651 aa23.37■■□□□ 1.33
PMF1-205ENST00000497069 PREX1Q8TCU6 1659 aa23.36■■□□□ 1.33
PMF1-205ENST00000497069 UHRF1BP1Q6BDS2 1440 aa23.34■■□□□ 1.33
PMF1-205ENST00000497069 NOS1P29475 1434 aa23.33■■□□□ 1.33
PMF1-205ENST00000497069 NLRP1Q9C000 1473 aa23.3■■□□□ 1.32
PMF1-205ENST00000497069 CFAP65Q6ZU64 1925 aaKnown RBP23.3■■□□□ 1.32
PMF1-205ENST00000497069 FOXD1Q16676 465 aa23.3■■□□□ 1.32
PMF1-205ENST00000497069 SETD1BQ9UPS6 1966 aaKnown RBP23.29■■□□□ 1.32
PMF1-205ENST00000497069 SLC52A1Q9NWF4 448 aa23.29■■□□□ 1.32
PMF1-205ENST00000497069 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
PMF1-205ENST00000497069 SYNMO15061 1565 aa23.27■■□□□ 1.32
PMF1-205ENST00000497069 PTPRTO14522 1441 aa23.27■■□□□ 1.32
PMF1-205ENST00000497069 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
PMF1-205ENST00000497069 A2ML1A8K2U0 1454 aa23.25■■□□□ 1.31
PMF1-205ENST00000497069 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
PMF1-205ENST00000497069 CEP170BQ9Y4F5 1589 aaPredicted RBP23.24■■□□□ 1.31
PMF1-205ENST00000497069 IDI1Q13907 227 aa23.24■■□□□ 1.31
PMF1-205ENST00000497069 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
PMF1-205ENST00000497069 TRPM2O94759 1503 aa23.23■■□□□ 1.31
PMF1-205ENST00000497069 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
PMF1-205ENST00000497069 ZNF142P52746 1687 aaPredicted RBP23.21■■□□□ 1.31
PMF1-205ENST00000497069 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
PMF1-205ENST00000497069 CHGAP10645 457 aaKnown RBP23.2■■□□□ 1.3
PMF1-205ENST00000497069 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
PMF1-205ENST00000497069 CCDC144AA2RUR9 1427 aa23.19■■□□□ 1.3
PMF1-205ENST00000497069 PIK3C2BO00750 1634 aa23.18■■□□□ 1.3
PMF1-205ENST00000497069 DHX57Q6P158 1386 aaKnown RBP23.17■■□□□ 1.3
PMF1-205ENST00000497069 HSPA2P54652 639 aa23.17■■□□□ 1.3
PMF1-205ENST00000497069 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
PMF1-205ENST00000497069 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
PMF1-205ENST00000497069 ADGRB3O60242 1522 aa23.15■■□□□ 1.3
PMF1-205ENST00000497069 UBR1Q8IWV7 1749 aa23.12■■□□□ 1.29
PMF1-205ENST00000497069 KDM5AP29375 1690 aaKnown RBP23.11■■□□□ 1.29
PMF1-205ENST00000497069 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
PMF1-205ENST00000497069 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
PMF1-205ENST00000497069 TMEM2Q9UHN6 1383 aa23.07■■□□□ 1.28
PMF1-205ENST00000497069 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
PMF1-205ENST00000497069 EID1Q9Y6B2 187 aa23.07■■□□□ 1.28
PMF1-205ENST00000497069 KIF1BO60333 1816 aa23.06■■□□□ 1.28
PMF1-205ENST00000497069 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
PMF1-205ENST00000497069 SLIT1O75093 1534 aa23.03■■□□□ 1.28
PMF1-205ENST00000497069 RGL3Q3MIN7 710 aa23.03■■□□□ 1.28
PMF1-205ENST00000497069 TXNDC2Q86VQ3 553 aa23.03■■□□□ 1.28
PMF1-205ENST00000497069 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.03■■□□□ 1.28
PMF1-205ENST00000497069 ARHGAP23Q9P227 1491 aa23.03■■□□□ 1.28
PMF1-205ENST00000497069 RIMS2Q9UQ26 1411 aa23.02■■□□□ 1.28
PMF1-205ENST00000497069 PPP1R15AO75807 674 aaPredicted RBP23.02■■□□□ 1.28
PMF1-205ENST00000497069 NCKAP5LQ9HCH0 1330 aa23.02■■□□□ 1.28
PMF1-205ENST00000497069 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
PMF1-205ENST00000497069 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms