RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
MACF1-223ENST00000496360 TRAPPC8Q9Y2L5 1435 aa20.17■□□□□ 0.82
MACF1-223ENST00000496360 BCORL1Q5H9F3 1711 aa20.17■□□□□ 0.82
MACF1-223ENST00000496360 ADAMTSL3P82987 1691 aa20.17■□□□□ 0.82
MACF1-223ENST00000496360 PTPN23Q9H3S7 1636 aa20.17■□□□□ 0.82
MACF1-223ENST00000496360 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
MACF1-223ENST00000496360 SAMD9LQ8IVG5 1584 aa20.17■□□□□ 0.82
MACF1-223ENST00000496360 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
MACF1-223ENST00000496360 ATP10AO60312 1499 aa20.16■□□□□ 0.82
MACF1-223ENST00000496360 HECW2Q9P2P5 1572 aa20.15■□□□□ 0.82
MACF1-223ENST00000496360 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
MACF1-223ENST00000496360 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
MACF1-223ENST00000496360 HSPA5P11021 654 aaKnown RBP20.14■□□□□ 0.81
MACF1-223ENST00000496360 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
MACF1-223ENST00000496360 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
MACF1-223ENST00000496360 C9orf84Q5VXU9 1444 aa20.13■□□□□ 0.81
MACF1-223ENST00000496360 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
MACF1-223ENST00000496360 PLEKHH2Q8IVE3 1493 aa20.13■□□□□ 0.81
MACF1-223ENST00000496360 SUPT6HQ7KZ85 1726 aaKnown RBP20.13■□□□□ 0.81
MACF1-223ENST00000496360 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
MACF1-223ENST00000496360 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
MACF1-223ENST00000496360 IL27Q8NEV9 243 aa20.12■□□□□ 0.81
MACF1-223ENST00000496360 KIAA1107Q9UPP5 1409 aa20.12■□□□□ 0.81
MACF1-223ENST00000496360 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
MACF1-223ENST00000496360 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
MACF1-223ENST00000496360 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
MACF1-223ENST00000496360 NUDCQ9Y266 331 aa20.1■□□□□ 0.81
MACF1-223ENST00000496360 DIP2CQ9Y2E4 1556 aa20.09■□□□□ 0.81
MACF1-223ENST00000496360 CCDC7Q96M83 1385 aa20.09■□□□□ 0.81
MACF1-223ENST00000496360 PTPRMP28827 1452 aa20.08■□□□□ 0.81
MACF1-223ENST00000496360 ABCA6Q8N139 1617 aa20.08■□□□□ 0.8
MACF1-223ENST00000496360 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
MACF1-223ENST00000496360 POLR1AO95602 1720 aaPredicted RBP20.06■□□□□ 0.8
MACF1-223ENST00000496360 NAIPQ13075 1403 aa20.06■□□□□ 0.8
MACF1-223ENST00000496360 MLECQ14165 292 aa20.06■□□□□ 0.8
MACF1-223ENST00000496360 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
MACF1-223ENST00000496360 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
MACF1-223ENST00000496360 REREQ9P2R6 1566 aa20.06■□□□□ 0.8
MACF1-223ENST00000496360 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
MACF1-223ENST00000496360 SPAG9O60271 1321 aaKnown RBP20.04■□□□□ 0.8
MACF1-223ENST00000496360 RIMS1Q86UR5 1692 aaKnown RBP20.03■□□□□ 0.8
MACF1-223ENST00000496360 MS4A1P11836 297 aa20.03■□□□□ 0.8
MACF1-223ENST00000496360 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
MACF1-223ENST00000496360 NEFMP07197 916 aa20.01■□□□□ 0.79
MACF1-223ENST00000496360 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
MACF1-223ENST00000496360 ATP7AQ04656 1500 aa20■□□□□ 0.79
MACF1-223ENST00000496360 AGLP35573 1532 aa19.99■□□□□ 0.79
MACF1-223ENST00000496360 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
MACF1-223ENST00000496360 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
MACF1-223ENST00000496360 FER1L4A9Z1Z3 1794 aa19.99■□□□□ 0.79
MACF1-223ENST00000496360 DDRGK1Q96HY6 314 aa19.98■□□□□ 0.79
MACF1-223ENST00000496360 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
MACF1-223ENST00000496360 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
MACF1-223ENST00000496360 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
MACF1-223ENST00000496360 MYOM3Q5VTT5 1437 aa19.94■□□□□ 0.78
MACF1-223ENST00000496360 RSPH4AQ5TD94 716 aa19.94■□□□□ 0.78
MACF1-223ENST00000496360 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
MACF1-223ENST00000496360 MIA2Q96PC5 1412 aa19.92■□□□□ 0.78
MACF1-223ENST00000496360 A2MP01023 1474 aa19.92■□□□□ 0.78
MACF1-223ENST00000496360 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
MACF1-223ENST00000496360 RTN4Q9NQC3 1192 aaKnown RBP19.91■□□□□ 0.78
MACF1-223ENST00000496360 ARHGEF5Q12774 1597 aa19.91■□□□□ 0.78
MACF1-223ENST00000496360 GSE1Q14687 1217 aa19.91■□□□□ 0.78
MACF1-223ENST00000496360 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
MACF1-223ENST00000496360 PLXNC1O60486 1568 aa19.9■□□□□ 0.78
MACF1-223ENST00000496360 BACH2Q9BYV9 841 aa19.9■□□□□ 0.78
MACF1-223ENST00000496360 SPATA31E1Q6ZUB1 1445 aa19.89■□□□□ 0.77
MACF1-223ENST00000496360 ADGBQ8N7X0 1667 aa19.89■□□□□ 0.77
MACF1-223ENST00000496360 PDE4AP27815 886 aa19.88■□□□□ 0.77
MACF1-223ENST00000496360 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
MACF1-223ENST00000496360 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
MACF1-223ENST00000496360 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
MACF1-223ENST00000496360 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
MACF1-223ENST00000496360 KIF7Q2M1P5 1343 aa19.85■□□□□ 0.77
MACF1-223ENST00000496360 TCOF1Q13428 1488 aaKnown RBP19.84■□□□□ 0.77
MACF1-223ENST00000496360 CEBPAP49715 358 aaPredicted RBP19.84■□□□□ 0.77
MACF1-223ENST00000496360 LMTK3Q96Q04 1460 aa19.84■□□□□ 0.77
MACF1-223ENST00000496360 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.77
MACF1-223ENST00000496360 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.77
MACF1-223ENST00000496360 MAST1Q9Y2H9 1570 aa19.81■□□□□ 0.76
MACF1-223ENST00000496360 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
MACF1-223ENST00000496360 KTN1Q86UP2 1357 aaKnown RBP19.81■□□□□ 0.76
MACF1-223ENST00000496360 FAM43AQ8N2R8 423 aa19.8■□□□□ 0.76
MACF1-223ENST00000496360 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
MACF1-223ENST00000496360 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
MACF1-223ENST00000496360 C3P01024 1663 aa19.79■□□□□ 0.76
MACF1-223ENST00000496360 GGT6Q6P531 493 aa19.79■□□□□ 0.76
MACF1-223ENST00000496360 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
MACF1-223ENST00000496360 ROCK2O75116 1388 aaKnown RBP19.79■□□□□ 0.76
MACF1-223ENST00000496360 MROH2AA6NES4 1674 aa19.77■□□□□ 0.76
MACF1-223ENST00000496360 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.75
MACF1-223ENST00000496360 PDE3BQ13370 1112 aa19.76■□□□□ 0.75
MACF1-223ENST00000496360 BRPF3Q9ULD4 1205 aa19.76■□□□□ 0.75
MACF1-223ENST00000496360 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
MACF1-223ENST00000496360 SETD1BQ9UPS6 1966 aaKnown RBP19.76■□□□□ 0.75
MACF1-223ENST00000496360 PREX1Q8TCU6 1659 aa19.76■□□□□ 0.75
MACF1-223ENST00000496360 KIF3BO15066 747 aa19.75■□□□□ 0.75
MACF1-223ENST00000496360 PNISRQ8TF01 805 aaKnown RBP19.75■□□□□ 0.75
MACF1-223ENST00000496360 ABCC5O15440 1437 aa19.74■□□□□ 0.75
MACF1-223ENST00000496360 CLTCQ00610 1675 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms