RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 TEX14Q8IWB6 1497 aa16.4■□□□□ 0.22
HCN3-204ENST00000496230 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
HCN3-204ENST00000496230 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
HCN3-204ENST00000496230 ABCC2Q92887 1545 aa16.39■□□□□ 0.22
HCN3-204ENST00000496230 CDC42BPBQ9Y5S2 1711 aa16.38■□□□□ 0.21
HCN3-204ENST00000496230 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
HCN3-204ENST00000496230 MLECQ14165 292 aa16.35■□□□□ 0.21
HCN3-204ENST00000496230 PLCH2O75038 1416 aa16.35■□□□□ 0.21
HCN3-204ENST00000496230 ADGRL2O95490 1459 aa16.34■□□□□ 0.21
HCN3-204ENST00000496230 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.2
HCN3-204ENST00000496230 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
HCN3-204ENST00000496230 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
HCN3-204ENST00000496230 FAM135AQ9P2D6 1515 aa16.32■□□□□ 0.2
HCN3-204ENST00000496230 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
HCN3-204ENST00000496230 ZCCHC11Q5TAX3 1644 aaKnown RBP16.31■□□□□ 0.2
HCN3-204ENST00000496230 CFAP65Q6ZU64 1925 aaKnown RBP16.3■□□□□ 0.2
HCN3-204ENST00000496230 FANCAO15360 1455 aa16.3■□□□□ 0.2
HCN3-204ENST00000496230 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
HCN3-204ENST00000496230 ADGBQ8N7X0 1667 aa16.28■□□□□ 0.2
HCN3-204ENST00000496230 TMEM132EQ6IEE7 984 aa16.27■□□□□ 0.2
HCN3-204ENST00000496230 PANK3Q9H999 370 aa16.27■□□□□ 0.2
HCN3-204ENST00000496230 PLA2R1Q13018 1463 aa16.27■□□□□ 0.19
HCN3-204ENST00000496230 SPATA31E1Q6ZUB1 1445 aa16.26■□□□□ 0.19
HCN3-204ENST00000496230 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
HCN3-204ENST00000496230 PREX2Q70Z35 1606 aa16.26■□□□□ 0.19
HCN3-204ENST00000496230 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
HCN3-204ENST00000496230 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
HCN3-204ENST00000496230 FAM69CQ0P6D2 419 aa16.25■□□□□ 0.19
HCN3-204ENST00000496230 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
HCN3-204ENST00000496230 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
HCN3-204ENST00000496230 CROCC2H7BZ55 1655 aa16.24■□□□□ 0.19
HCN3-204ENST00000496230 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
HCN3-204ENST00000496230 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
HCN3-204ENST00000496230 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
HCN3-204ENST00000496230 STK26Q9P289 416 aa16.22■□□□□ 0.19
HCN3-204ENST00000496230 MYO5CQ9NQX4 1742 aa16.22■□□□□ 0.19
HCN3-204ENST00000496230 CD109Q6YHK3 1445 aa16.21■□□□□ 0.19
HCN3-204ENST00000496230 ADGRF5Q8IZF2 1346 aa16.21■□□□□ 0.18
HCN3-204ENST00000496230 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
HCN3-204ENST00000496230 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
HCN3-204ENST00000496230 KANK1Q14678 1352 aa16.19■□□□□ 0.18
HCN3-204ENST00000496230 B4GALNT3Q6L9W6 998 aa16.18■□□□□ 0.18
HCN3-204ENST00000496230 A2MP01023 1474 aa16.17■□□□□ 0.18
HCN3-204ENST00000496230 TMF1P82094 1093 aa16.17■□□□□ 0.18
HCN3-204ENST00000496230 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
HCN3-204ENST00000496230 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
HCN3-204ENST00000496230 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
HCN3-204ENST00000496230 TESK2Q96S53 571 aa16.15■□□□□ 0.18
HCN3-204ENST00000496230 PRAG1Q86YV5 1406 aa16.15■□□□□ 0.18
HCN3-204ENST00000496230 FBXO31Q5XUX0 539 aaPredicted RBP16.14■□□□□ 0.17
HCN3-204ENST00000496230 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
HCN3-204ENST00000496230 DUOX2Q9NRD8 1548 aa16.13■□□□□ 0.17
HCN3-204ENST00000496230 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
HCN3-204ENST00000496230 ABCC1P33527 1531 aa16.12■□□□□ 0.17
HCN3-204ENST00000496230 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
HCN3-204ENST00000496230 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
HCN3-204ENST00000496230 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
HCN3-204ENST00000496230 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
HCN3-204ENST00000496230 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
HCN3-204ENST00000496230 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
HCN3-204ENST00000496230 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
HCN3-204ENST00000496230 ERBINQ96RT1 1412 aa16.07■□□□□ 0.16
HCN3-204ENST00000496230 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
HCN3-204ENST00000496230 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
HCN3-204ENST00000496230 KDM5CP41229 1560 aa16.07■□□□□ 0.16
HCN3-204ENST00000496230 KTN1Q86UP2 1357 aaKnown RBP16.06■□□□□ 0.16
HCN3-204ENST00000496230 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
HCN3-204ENST00000496230 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
HCN3-204ENST00000496230 PER1O15534 1290 aaPredicted RBP16.06■□□□□ 0.16
HCN3-204ENST00000496230 SLC12A5Q9H2X9 1139 aa16.05■□□□□ 0.16
HCN3-204ENST00000496230 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
HCN3-204ENST00000496230 PLIN1O60240 522 aa16.05■□□□□ 0.16
HCN3-204ENST00000496230 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
HCN3-204ENST00000496230 IDI1Q13907 227 aa16.04■□□□□ 0.16
HCN3-204ENST00000496230 ATP10AO60312 1499 aa16.04■□□□□ 0.16
HCN3-204ENST00000496230 ZFYVE16Q7Z3T8 1539 aa16.03■□□□□ 0.16
HCN3-204ENST00000496230 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
HCN3-204ENST00000496230 ADAMTS8Q9UP79 889 aa16.02■□□□□ 0.16
HCN3-204ENST00000496230 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
HCN3-204ENST00000496230 YEATS2Q9ULM3 1422 aa16.01■□□□□ 0.15
HCN3-204ENST00000496230 NOS1P29475 1434 aa16.01■□□□□ 0.15
HCN3-204ENST00000496230 RALBP1Q15311 655 aa16■□□□□ 0.15
HCN3-204ENST00000496230 CABP2Q9NPB3 220 aa16■□□□□ 0.15
HCN3-204ENST00000496230 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
HCN3-204ENST00000496230 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
HCN3-204ENST00000496230 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
HCN3-204ENST00000496230 MINK1Q8N4C8 1332 aaPredicted RBP15.98■□□□□ 0.15
HCN3-204ENST00000496230 E9PCH4 1651 aa15.97■□□□□ 0.15
HCN3-204ENST00000496230 RTEL1-TNFRSF6BF6WH68 1400 aa15.97■□□□□ 0.15
HCN3-204ENST00000496230 SRPK2P78362 688 aaKnown RBP15.96■□□□□ 0.15
HCN3-204ENST00000496230 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
HCN3-204ENST00000496230 ZNF518AQ6AHZ1 1483 aa15.96■□□□□ 0.15
HCN3-204ENST00000496230 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
HCN3-204ENST00000496230 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
HCN3-204ENST00000496230 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.14
HCN3-204ENST00000496230 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
HCN3-204ENST00000496230 TSPOAP1O95153 1857 aa15.95■□□□□ 0.14
HCN3-204ENST00000496230 FBLN1P23142 703 aa15.95■□□□□ 0.14
HCN3-204ENST00000496230 UNC13BO14795 1591 aa15.95■□□□□ 0.14
HCN3-204ENST00000496230 IQGAP3Q86VI3 1631 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms