RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 PROX2Q3B8N5 592 aa13.6□□□□□ -0.23
CLTC-208ENST00000496076 RABGEF1Q9UJ41 708 aa13.59□□□□□ -0.23
CLTC-208ENST00000496076 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
CLTC-208ENST00000496076 EPAS1Q99814 870 aa13.57□□□□□ -0.24
CLTC-208ENST00000496076 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
CLTC-208ENST00000496076 DDX12PQ92771 950 aa13.52□□□□□ -0.25
CLTC-208ENST00000496076 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
CLTC-208ENST00000496076 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
CLTC-208ENST00000496076 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
CLTC-208ENST00000496076 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
CLTC-208ENST00000496076 ANKK1Q8NFD2 765 aa13.49□□□□□ -0.25
CLTC-208ENST00000496076 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
CLTC-208ENST00000496076 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
CLTC-208ENST00000496076 LAPTM4BQ86VI4 370 aa13.48□□□□□ -0.25
CLTC-208ENST00000496076 BCAMP50895 628 aa13.44□□□□□ -0.26
CLTC-208ENST00000496076 PDIA6Q15084 440 aa13.44□□□□□ -0.26
CLTC-208ENST00000496076 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
CLTC-208ENST00000496076 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
CLTC-208ENST00000496076 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
CLTC-208ENST00000496076 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
CLTC-208ENST00000496076 SEPT9Q9UHD8 586 aaPredicted RBP13.43□□□□□ -0.26
CLTC-208ENST00000496076 SOWAHBA6NEL2 793 aa13.42□□□□□ -0.26
CLTC-208ENST00000496076 SPDYE16A6NNV3 312 aaPredicted RBP13.42□□□□□ -0.26
CLTC-208ENST00000496076 NBR1Q14596 966 aa13.42□□□□□ -0.26
CLTC-208ENST00000496076 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
CLTC-208ENST00000496076 E2F4Q16254 413 aa13.41□□□□□ -0.26
CLTC-208ENST00000496076 EN1Q05925 392 aaPredicted RBP13.4□□□□□ -0.26
CLTC-208ENST00000496076 MAP3K7O43318 606 aa13.39□□□□□ -0.27
CLTC-208ENST00000496076 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
CLTC-208ENST00000496076 TSR1Q2NL82 804 aaKnown RBP13.38□□□□□ -0.27
CLTC-208ENST00000496076 A0A0G2JS52 829 aa13.37□□□□□ -0.27
CLTC-208ENST00000496076 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
CLTC-208ENST00000496076 RGS20O76081 388 aa13.36□□□□□ -0.27
CLTC-208ENST00000496076 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
CLTC-208ENST00000496076 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
CLTC-208ENST00000496076 PACS2Q86VP3 889 aa13.34□□□□□ -0.27
CLTC-208ENST00000496076 TSKSQ9UJT2 592 aa13.34□□□□□ -0.27
CLTC-208ENST00000496076 ITGBL1O95965 494 aaPredicted RBP13.33□□□□□ -0.28
CLTC-208ENST00000496076 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
CLTC-208ENST00000496076 GRXCR2A6NFK2 248 aa13.32□□□□□ -0.28
CLTC-208ENST00000496076 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.31□□□□□ -0.28
CLTC-208ENST00000496076 LRCH3Q96II8 777 aa13.3□□□□□ -0.28
CLTC-208ENST00000496076 PRIM1P49642 420 aaKnown RBP13.29□□□□□ -0.28
CLTC-208ENST00000496076 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
CLTC-208ENST00000496076 TSR3Q9UJK0 312 aaKnown RBP13.29□□□□□ -0.28
CLTC-208ENST00000496076 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
CLTC-208ENST00000496076 PRSS12P56730 875 aa13.27□□□□□ -0.29
CLTC-208ENST00000496076 SMAPO00193 183 aa13.25□□□□□ -0.29
CLTC-208ENST00000496076 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
CLTC-208ENST00000496076 FAM198AQ9UFP1 575 aa13.25□□□□□ -0.29
CLTC-208ENST00000496076 OSBPP22059 807 aa13.24□□□□□ -0.29
CLTC-208ENST00000496076 KCNC4Q03721 635 aa13.24□□□□□ -0.29
CLTC-208ENST00000496076 PPP4CP60510 307 aa13.2□□□□□ -0.3
CLTC-208ENST00000496076 IRX2Q9BZI1 471 aaPredicted RBP13.2□□□□□ -0.3
CLTC-208ENST00000496076 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
CLTC-208ENST00000496076 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
CLTC-208ENST00000496076 TATDN2Q93075 761 aa13.19□□□□□ -0.3
CLTC-208ENST00000496076 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
CLTC-208ENST00000496076 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
CLTC-208ENST00000496076 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
CLTC-208ENST00000496076 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
CLTC-208ENST00000496076 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
CLTC-208ENST00000496076 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
CLTC-208ENST00000496076 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
CLTC-208ENST00000496076 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
CLTC-208ENST00000496076 TJAP1Q5JTD0 557 aa13.09□□□□□ -0.31
CLTC-208ENST00000496076 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
CLTC-208ENST00000496076 RNF40O75150 1001 aa13.06□□□□□ -0.32
CLTC-208ENST00000496076 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CLTC-208ENST00000496076 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
CLTC-208ENST00000496076 MTRQ99707 1265 aa13.04□□□□□ -0.32
CLTC-208ENST00000496076 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
CLTC-208ENST00000496076 IL21Q9HBE4 155 aa13.02□□□□□ -0.33
CLTC-208ENST00000496076 APLP1P51693 650 aa13.01□□□□□ -0.33
CLTC-208ENST00000496076 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
CLTC-208ENST00000496076 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
CLTC-208ENST00000496076 ZNF516Q92618 1163 aa12.99□□□□□ -0.33
CLTC-208ENST00000496076 EYA1Q99502 592 aa12.98□□□□□ -0.33
CLTC-208ENST00000496076 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
CLTC-208ENST00000496076 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
CLTC-208ENST00000496076 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
CLTC-208ENST00000496076 Q6ZNB5 142 aa12.95□□□□□ -0.34
CLTC-208ENST00000496076 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
CLTC-208ENST00000496076 PTGDRQ13258 359 aa12.92□□□□□ -0.34
CLTC-208ENST00000496076 PRKD2Q9BZL6 878 aa12.91□□□□□ -0.34
CLTC-208ENST00000496076 COPS2P61201 443 aa12.9□□□□□ -0.34
CLTC-208ENST00000496076 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
CLTC-208ENST00000496076 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.9□□□□□ -0.34
CLTC-208ENST00000496076 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
CLTC-208ENST00000496076 GFRA3O60609 400 aa12.87□□□□□ -0.35
CLTC-208ENST00000496076 LAPTM4AQ15012 233 aa12.87□□□□□ -0.35
CLTC-208ENST00000496076 DNAJB2P25686 324 aa12.85□□□□□ -0.35
CLTC-208ENST00000496076 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
CLTC-208ENST00000496076 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
CLTC-208ENST00000496076 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
CLTC-208ENST00000496076 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
CLTC-208ENST00000496076 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
CLTC-208ENST00000496076 ZPR1O75312 459 aa12.83□□□□□ -0.36
CLTC-208ENST00000496076 SEMA3EO15041 775 aa12.82□□□□□ -0.36
CLTC-208ENST00000496076 GGCXP38435 758 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms