RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 TNRQ92752 1358 aa24.72■■□□□ 1.55
CHMP2B-205ENST00000494980 SPAG9O60271 1321 aaKnown RBP24.72■■□□□ 1.55
CHMP2B-205ENST00000494980 INO80Q9ULG1 1556 aaPredicted RBP24.71■■□□□ 1.55
CHMP2B-205ENST00000494980 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
CHMP2B-205ENST00000494980 XIRP1Q702N8 1843 aaKnown RBP24.69■■□□□ 1.54
CHMP2B-205ENST00000494980 FMN1Q68DA7 1419 aa24.68■■□□□ 1.54
CHMP2B-205ENST00000494980 FBXO31Q5XUX0 539 aaPredicted RBP24.65■■□□□ 1.54
CHMP2B-205ENST00000494980 UGGT1Q9NYU2 1555 aa24.65■■□□□ 1.54
CHMP2B-205ENST00000494980 FAM135AQ9P2D6 1515 aa24.63■■□□□ 1.53
CHMP2B-205ENST00000494980 THEMISQ8N1K5 641 aaPredicted RBP24.63■■□□□ 1.53
CHMP2B-205ENST00000494980 ADGBQ8N7X0 1667 aa24.62■■□□□ 1.53
CHMP2B-205ENST00000494980 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
CHMP2B-205ENST00000494980 ZC3H13Q5T200 1668 aaKnown RBP24.61■■□□□ 1.53
CHMP2B-205ENST00000494980 PZPP20742 1482 aa24.6■■□□□ 1.53
CHMP2B-205ENST00000494980 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
CHMP2B-205ENST00000494980 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
CHMP2B-205ENST00000494980 NLRP1Q9C000 1473 aa24.58■■□□□ 1.52
CHMP2B-205ENST00000494980 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
CHMP2B-205ENST00000494980 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
CHMP2B-205ENST00000494980 KDM5DQ9BY66 1539 aa24.52■■□□□ 1.52
CHMP2B-205ENST00000494980 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
CHMP2B-205ENST00000494980 ARHGAP35Q9NRY4 1499 aa24.49■■□□□ 1.51
CHMP2B-205ENST00000494980 PHLPP1O60346 1717 aa24.47■■□□□ 1.51
CHMP2B-205ENST00000494980 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.51
CHMP2B-205ENST00000494980 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
CHMP2B-205ENST00000494980 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
CHMP2B-205ENST00000494980 JCADQ9P266 1359 aa24.42■■□□□ 1.5
CHMP2B-205ENST00000494980 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
CHMP2B-205ENST00000494980 LRP6O75581 1613 aa24.41■■□□□ 1.5
CHMP2B-205ENST00000494980 EEA1Q15075 1411 aa24.41■■□□□ 1.5
CHMP2B-205ENST00000494980 LRRC9Q6ZRR7 1453 aa24.39■■□□□ 1.5
CHMP2B-205ENST00000494980 SCAF11Q99590 1463 aaKnown RBP24.39■■□□□ 1.5
CHMP2B-205ENST00000494980 ZNF772Q68DY9 489 aaPredicted RBP24.39■■□□□ 1.49
CHMP2B-205ENST00000494980 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
CHMP2B-205ENST00000494980 UBR1Q8IWV7 1749 aa24.37■■□□□ 1.49
CHMP2B-205ENST00000494980 TMEM94Q12767 1356 aa24.36■■□□□ 1.49
CHMP2B-205ENST00000494980 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
CHMP2B-205ENST00000494980 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
CHMP2B-205ENST00000494980 KIF3BO15066 747 aa24.35■■□□□ 1.49
CHMP2B-205ENST00000494980 MEX3CQ5U5Q3 659 aaKnown RBP24.35■■□□□ 1.49
CHMP2B-205ENST00000494980 CDK12Q9NYV4 1490 aaPredicted RBP24.33■■□□□ 1.49
CHMP2B-205ENST00000494980 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
CHMP2B-205ENST00000494980 RXRBP28702 533 aa24.32■■□□□ 1.48
CHMP2B-205ENST00000494980 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
CHMP2B-205ENST00000494980 LTKP29376 864 aa24.27■■□□□ 1.48
CHMP2B-205ENST00000494980 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
CHMP2B-205ENST00000494980 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
CHMP2B-205ENST00000494980 SPATA31A6Q5VVP1 1343 aa24.26■■□□□ 1.47
CHMP2B-205ENST00000494980 CFAP65Q6ZU64 1925 aaKnown RBP24.25■■□□□ 1.47
CHMP2B-205ENST00000494980 RBM33Q96EV2 1170 aaKnown RBP24.25■■□□□ 1.47
CHMP2B-205ENST00000494980 ERVK-7P63135 1459 aa24.25■■□□□ 1.47
CHMP2B-205ENST00000494980 NCOA2Q15596 1464 aa24.25■■□□□ 1.47
CHMP2B-205ENST00000494980 ARHGAP23Q9P227 1491 aa24.25■■□□□ 1.47
CHMP2B-205ENST00000494980 SLIT1O75093 1534 aa24.25■■□□□ 1.47
CHMP2B-205ENST00000494980 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
CHMP2B-205ENST00000494980 TIAM1Q13009 1591 aa24.24■■□□□ 1.47
CHMP2B-205ENST00000494980 SETBP1Q9Y6X0 1596 aa24.24■■□□□ 1.47
CHMP2B-205ENST00000494980 TXNDC2Q86VQ3 553 aa24.23■■□□□ 1.47
CHMP2B-205ENST00000494980 SHPRHQ149N8 1683 aa24.23■■□□□ 1.47
CHMP2B-205ENST00000494980 MBD5Q9P267 1494 aa24.22■■□□□ 1.47
CHMP2B-205ENST00000494980 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
CHMP2B-205ENST00000494980 FGD6Q6ZV73 1430 aa24.21■■□□□ 1.47
CHMP2B-205ENST00000494980 CCNB3Q8WWL7 1395 aa24.21■■□□□ 1.47
CHMP2B-205ENST00000494980 RGS12O14924 1447 aa24.2■■□□□ 1.46
CHMP2B-205ENST00000494980 ABCC3O15438 1527 aa24.2■■□□□ 1.46
CHMP2B-205ENST00000494980 ZNF644Q9H582 1327 aaPredicted RBP24.19■■□□□ 1.46
CHMP2B-205ENST00000494980 PROSER2Q86WR7 435 aaPredicted RBP24.19■■□□□ 1.46
CHMP2B-205ENST00000494980 PRDM15P57071 1507 aaPredicted RBP24.19■■□□□ 1.46
CHMP2B-205ENST00000494980 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
CHMP2B-205ENST00000494980 MSH6P52701 1360 aa24.17■■□□□ 1.46
CHMP2B-205ENST00000494980 ZRANB1Q9UGI0 708 aa24.17■■□□□ 1.46
CHMP2B-205ENST00000494980 EP400Q96L91 3159 aa24.17■■□□□ 1.46
CHMP2B-205ENST00000494980 KCNA6P17658 529 aa24.15■■□□□ 1.46
CHMP2B-205ENST00000494980 EID1Q9Y6B2 187 aa24.14■■□□□ 1.45
CHMP2B-205ENST00000494980 NKTRP30414 1462 aaKnown RBP24.13■■□□□ 1.45
CHMP2B-205ENST00000494980 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
CHMP2B-205ENST00000494980 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
CHMP2B-205ENST00000494980 CEP152O94986 1710 aa24.11■■□□□ 1.45
CHMP2B-205ENST00000494980 NUTM2BA6NNL0 878 aaPredicted RBP24.11■■□□□ 1.45
CHMP2B-205ENST00000494980 NUTM2EB1AL46 878 aaPredicted RBP24.11■■□□□ 1.45
CHMP2B-205ENST00000494980 NUTM2DQ5VT03 806 aaPredicted RBP24.11■■□□□ 1.45
CHMP2B-205ENST00000494980 NUTM2AQ8IVF1 878 aaPredicted RBP24.11■■□□□ 1.45
CHMP2B-205ENST00000494980 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
CHMP2B-205ENST00000494980 AFF2P51816 1311 aa24.1■■□□□ 1.45
CHMP2B-205ENST00000494980 FOXD1Q16676 465 aa24.09■■□□□ 1.45
CHMP2B-205ENST00000494980 AHDC1Q5TGY3 1603 aaPredicted RBP24.09■■□□□ 1.45
CHMP2B-205ENST00000494980 CCDC141Q6ZP82 1450 aa24.07■■□□□ 1.44
CHMP2B-205ENST00000494980 PIK3C2BO00750 1634 aa24.06■■□□□ 1.44
CHMP2B-205ENST00000494980 ATAD2Q6PL18 1390 aa24.04■■□□□ 1.44
CHMP2B-205ENST00000494980 TMEM2Q9UHN6 1383 aa24.04■■□□□ 1.44
CHMP2B-205ENST00000494980 SLC26A8Q96RN1 970 aa24.04■■□□□ 1.44
CHMP2B-205ENST00000494980 CAMSAP2Q08AD1 1489 aa24.04■■□□□ 1.44
CHMP2B-205ENST00000494980 TET3O43151 1660 aa24.04■■□□□ 1.44
CHMP2B-205ENST00000494980 DIP2AQ14689 1571 aa24.03■■□□□ 1.44
CHMP2B-205ENST00000494980 RBM6P78332 1123 aaKnown RBP24.02■■□□□ 1.44
CHMP2B-205ENST00000494980 MROH1Q8NDA8 1641 aa24.02■■□□□ 1.44
CHMP2B-205ENST00000494980 QTRT2Q9H974 415 aaKnown RBP23.97■■□□□ 1.43
CHMP2B-205ENST00000494980 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
CHMP2B-205ENST00000494980 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.43
CHMP2B-205ENST00000494980 EFCAB6Q5THR3 1501 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms