RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 BCL2L12Q9HB09 334 aa13.58□□□□□ -0.24
MSL3-217ENST00000494268 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
MSL3-217ENST00000494268 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
MSL3-217ENST00000494268 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
MSL3-217ENST00000494268 GPIHBP1Q8IV16 184 aa13.54□□□□□ -0.24
MSL3-217ENST00000494268 NPDC1Q9NQX5 325 aaPredicted RBP13.54□□□□□ -0.24
MSL3-217ENST00000494268 POTEMA6NI47 508 aa13.53□□□□□ -0.24
MSL3-217ENST00000494268 COL9A1P20849 921 aa13.53□□□□□ -0.24
MSL3-217ENST00000494268 PSEN2P49810 448 aa13.53□□□□□ -0.24
MSL3-217ENST00000494268 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
MSL3-217ENST00000494268 PTPREP23469 700 aa13.52□□□□□ -0.25
MSL3-217ENST00000494268 PTGDRQ13258 359 aa13.51□□□□□ -0.25
MSL3-217ENST00000494268 ZC3H15Q8WU90 426 aaKnown RBP13.51□□□□□ -0.25
MSL3-217ENST00000494268 GPR37O15354 613 aa13.5□□□□□ -0.25
MSL3-217ENST00000494268 ARHGAP33O14559 1287 aa13.49□□□□□ -0.25
MSL3-217ENST00000494268 TPRNQ4KMQ1 711 aa13.49□□□□□ -0.25
MSL3-217ENST00000494268 FCHSD2O94868 740 aa13.47□□□□□ -0.25
MSL3-217ENST00000494268 PRKCSHP14314 528 aaPredicted RBP13.47□□□□□ -0.25
MSL3-217ENST00000494268 DMRTA1Q5VZB9 504 aa13.47□□□□□ -0.25
MSL3-217ENST00000494268 FECHP22830 423 aa13.45□□□□□ -0.26
MSL3-217ENST00000494268 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
MSL3-217ENST00000494268 PBX2P40425 430 aa13.44□□□□□ -0.26
MSL3-217ENST00000494268 KCNH8Q96L42 1107 aa13.43□□□□□ -0.26
MSL3-217ENST00000494268 ZMYND10O75800 440 aa13.42□□□□□ -0.26
MSL3-217ENST00000494268 CERKQ8TCT0 537 aa13.42□□□□□ -0.26
MSL3-217ENST00000494268 GNPATO15228 680 aa13.41□□□□□ -0.26
MSL3-217ENST00000494268 HIC1Q14526 733 aa13.41□□□□□ -0.26
MSL3-217ENST00000494268 PROX2Q3B8N5 592 aa13.41□□□□□ -0.26
MSL3-217ENST00000494268 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
MSL3-217ENST00000494268 PRSS12P56730 875 aa13.4□□□□□ -0.26
MSL3-217ENST00000494268 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
MSL3-217ENST00000494268 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
MSL3-217ENST00000494268 KRTAP3-3Q9BYR6 98 aa13.39□□□□□ -0.27
MSL3-217ENST00000494268 KRTAP3-2Q9BYR7 98 aa13.39□□□□□ -0.27
MSL3-217ENST00000494268 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
MSL3-217ENST00000494268 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
MSL3-217ENST00000494268 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
MSL3-217ENST00000494268 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
MSL3-217ENST00000494268 TSKSQ9UJT2 592 aa13.37□□□□□ -0.27
MSL3-217ENST00000494268 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
MSL3-217ENST00000494268 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
MSL3-217ENST00000494268 TTC13Q8NBP0 860 aa13.34□□□□□ -0.27
MSL3-217ENST00000494268 VPS9D1Q9Y2B5 631 aa13.34□□□□□ -0.27
MSL3-217ENST00000494268 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
MSL3-217ENST00000494268 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
MSL3-217ENST00000494268 KRI1Q8N9T8 703 aaKnown RBP13.33□□□□□ -0.28
MSL3-217ENST00000494268 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
MSL3-217ENST00000494268 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
MSL3-217ENST00000494268 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
MSL3-217ENST00000494268 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
MSL3-217ENST00000494268 IRF6O14896 467 aa13.29□□□□□ -0.28
MSL3-217ENST00000494268 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
MSL3-217ENST00000494268 TK2O00142 265 aa13.28□□□□□ -0.28
MSL3-217ENST00000494268 MAP2K5Q13163 448 aa13.28□□□□□ -0.28
MSL3-217ENST00000494268 ONECUT3O60422 494 aaPredicted RBP13.27□□□□□ -0.29
MSL3-217ENST00000494268 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
MSL3-217ENST00000494268 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
MSL3-217ENST00000494268 RABGEF1Q9UJ41 708 aa13.27□□□□□ -0.29
MSL3-217ENST00000494268 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
MSL3-217ENST00000494268 SMAPO00193 183 aa13.26□□□□□ -0.29
MSL3-217ENST00000494268 ADGRG1Q9Y653 693 aa13.26□□□□□ -0.29
MSL3-217ENST00000494268 NUDT18Q6ZVK8 323 aa13.25□□□□□ -0.29
MSL3-217ENST00000494268 TATDN2Q93075 761 aa13.25□□□□□ -0.29
MSL3-217ENST00000494268 PNMA3Q9UL41 463 aa13.25□□□□□ -0.29
MSL3-217ENST00000494268 BHMG1C9JSJ3 638 aaPredicted RBP13.24□□□□□ -0.29
MSL3-217ENST00000494268 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
MSL3-217ENST00000494268 HRO43593 1189 aa13.23□□□□□ -0.29
MSL3-217ENST00000494268 EYA1Q99502 592 aa13.22□□□□□ -0.29
MSL3-217ENST00000494268 SEPT9Q9UHD8 586 aaPredicted RBP13.22□□□□□ -0.29
MSL3-217ENST00000494268 AK7Q96M32 723 aa13.21□□□□□ -0.29
MSL3-217ENST00000494268 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
MSL3-217ENST00000494268 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
MSL3-217ENST00000494268 OATP04181 439 aa13.19□□□□□ -0.3
MSL3-217ENST00000494268 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
MSL3-217ENST00000494268 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
MSL3-217ENST00000494268 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
MSL3-217ENST00000494268 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
MSL3-217ENST00000494268 TRIM66O15016 1216 aa13.16□□□□□ -0.3
MSL3-217ENST00000494268 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
MSL3-217ENST00000494268 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
MSL3-217ENST00000494268 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
MSL3-217ENST00000494268 RCCD1A6NED2 376 aa13.13□□□□□ -0.31
MSL3-217ENST00000494268 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
MSL3-217ENST00000494268 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
MSL3-217ENST00000494268 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
MSL3-217ENST00000494268 DNAJB2P25686 324 aa13.08□□□□□ -0.32
MSL3-217ENST00000494268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.07□□□□□ -0.32
MSL3-217ENST00000494268 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
MSL3-217ENST00000494268 PDE4DQ08499 809 aa13.07□□□□□ -0.32
MSL3-217ENST00000494268 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
MSL3-217ENST00000494268 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
MSL3-217ENST00000494268 AMHR2Q16671 573 aa13.06□□□□□ -0.32
MSL3-217ENST00000494268 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
MSL3-217ENST00000494268 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
MSL3-217ENST00000494268 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
MSL3-217ENST00000494268 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
MSL3-217ENST00000494268 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
MSL3-217ENST00000494268 WNT2BQ93097 391 aa13.02□□□□□ -0.33
MSL3-217ENST00000494268 TMUB1Q9BVT8 246 aa13.02□□□□□ -0.33
MSL3-217ENST00000494268 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms