RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
SORT1-207ENST00000493736 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
SORT1-207ENST00000493736 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
SORT1-207ENST00000493736 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
SORT1-207ENST00000493736 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
SORT1-207ENST00000493736 GRXCR2A6NFK2 248 aa11.53□□□□□ -0.56
SORT1-207ENST00000493736 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
SORT1-207ENST00000493736 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
SORT1-207ENST00000493736 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
SORT1-207ENST00000493736 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
SORT1-207ENST00000493736 HRO43593 1189 aa11.51□□□□□ -0.57
SORT1-207ENST00000493736 C6orf132Q5T0Z8 1188 aa11.51□□□□□ -0.57
SORT1-207ENST00000493736 MAP3K7O43318 606 aa11.5□□□□□ -0.57
SORT1-207ENST00000493736 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
SORT1-207ENST00000493736 COL9A1P20849 921 aa11.49□□□□□ -0.57
SORT1-207ENST00000493736 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
SORT1-207ENST00000493736 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
SORT1-207ENST00000493736 OSBPP22059 807 aa11.43□□□□□ -0.58
SORT1-207ENST00000493736 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
SORT1-207ENST00000493736 MRPL50Q8N5N7 158 aaKnown RBP11.42□□□□□ -0.58
SORT1-207ENST00000493736 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
SORT1-207ENST00000493736 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
SORT1-207ENST00000493736 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
SORT1-207ENST00000493736 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
SORT1-207ENST00000493736 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
SORT1-207ENST00000493736 MLLT3P42568 568 aaPredicted RBP11.4□□□□□ -0.58
SORT1-207ENST00000493736 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
SORT1-207ENST00000493736 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
SORT1-207ENST00000493736 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
SORT1-207ENST00000493736 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
SORT1-207ENST00000493736 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
SORT1-207ENST00000493736 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
SORT1-207ENST00000493736 SEMA3EO15041 775 aa11.35□□□□□ -0.59
SORT1-207ENST00000493736 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
SORT1-207ENST00000493736 HCSTQ9UBK5 93 aa11.35□□□□□ -0.59
SORT1-207ENST00000493736 PRSS12P56730 875 aa11.33□□□□□ -0.6
SORT1-207ENST00000493736 PACS2Q86VP3 889 aa11.33□□□□□ -0.6
SORT1-207ENST00000493736 WNT2BQ93097 391 aa11.33□□□□□ -0.6
SORT1-207ENST00000493736 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
SORT1-207ENST00000493736 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
SORT1-207ENST00000493736 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
SORT1-207ENST00000493736 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
SORT1-207ENST00000493736 PTPN5P54829 565 aa11.29□□□□□ -0.6
SORT1-207ENST00000493736 ANKK1Q8NFD2 765 aa11.29□□□□□ -0.6
SORT1-207ENST00000493736 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
SORT1-207ENST00000493736 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
SORT1-207ENST00000493736 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
SORT1-207ENST00000493736 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
SORT1-207ENST00000493736 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
SORT1-207ENST00000493736 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
SORT1-207ENST00000493736 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
SORT1-207ENST00000493736 NPDC1Q9NQX5 325 aaPredicted RBP11.26□□□□□ -0.61
SORT1-207ENST00000493736 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
SORT1-207ENST00000493736 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
SORT1-207ENST00000493736 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
SORT1-207ENST00000493736 SMAPO00193 183 aa11.23□□□□□ -0.61
SORT1-207ENST00000493736 PADI6Q6TGC4 694 aa11.23□□□□□ -0.61
SORT1-207ENST00000493736 TATDN2Q93075 761 aa11.23□□□□□ -0.61
SORT1-207ENST00000493736 BCAMP50895 628 aa11.21□□□□□ -0.61
SORT1-207ENST00000493736 PTGDRQ13258 359 aa11.21□□□□□ -0.61
SORT1-207ENST00000493736 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
SORT1-207ENST00000493736 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
SORT1-207ENST00000493736 FCHSD2O94868 740 aa11.19□□□□□ -0.62
SORT1-207ENST00000493736 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
SORT1-207ENST00000493736 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
SORT1-207ENST00000493736 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
SORT1-207ENST00000493736 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
SORT1-207ENST00000493736 C3orf80F5H4A9 247 aa11.18□□□□□ -0.62
SORT1-207ENST00000493736 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
SORT1-207ENST00000493736 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
SORT1-207ENST00000493736 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
SORT1-207ENST00000493736 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
SORT1-207ENST00000493736 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
SORT1-207ENST00000493736 TSR3Q9UJK0 312 aaKnown RBP11.13□□□□□ -0.63
SORT1-207ENST00000493736 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
SORT1-207ENST00000493736 NYAP1Q6ZVC0 841 aa11.11□□□□□ -0.63
SORT1-207ENST00000493736 PPP4CP60510 307 aa11.1□□□□□ -0.63
SORT1-207ENST00000493736 HIC1Q14526 733 aa11.1□□□□□ -0.63
SORT1-207ENST00000493736 RBM46Q8TBY0 533 aaKnown RBP11.1□□□□□ -0.63
SORT1-207ENST00000493736 RNF40O75150 1001 aa11.09□□□□□ -0.63
SORT1-207ENST00000493736 EYA1Q99502 592 aa11.09□□□□□ -0.63
SORT1-207ENST00000493736 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
SORT1-207ENST00000493736 ADGRG1Q9Y653 693 aa11.08□□□□□ -0.64
SORT1-207ENST00000493736 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
SORT1-207ENST00000493736 GNPATO15228 680 aa11.06□□□□□ -0.64
SORT1-207ENST00000493736 SLC4A3P48751 1232 aa11.06□□□□□ -0.64
SORT1-207ENST00000493736 FAM161AQ3B820 660 aa11.06□□□□□ -0.64
SORT1-207ENST00000493736 DNAJB2P25686 324 aa11.04□□□□□ -0.64
SORT1-207ENST00000493736 SLF2Q8IX21 1173 aa11.04□□□□□ -0.64
SORT1-207ENST00000493736 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
SORT1-207ENST00000493736 GPR37O15354 613 aa11.03□□□□□ -0.64
SORT1-207ENST00000493736 OATP04181 439 aa11.03□□□□□ -0.64
SORT1-207ENST00000493736 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
SORT1-207ENST00000493736 RCCD1A6NED2 376 aa11.01□□□□□ -0.65
SORT1-207ENST00000493736 FECHP22830 423 aa11.01□□□□□ -0.65
SORT1-207ENST00000493736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
SORT1-207ENST00000493736 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
SORT1-207ENST00000493736 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
SORT1-207ENST00000493736 PXYLP1Q8TE99 480 aa10.98□□□□□ -0.65
SORT1-207ENST00000493736 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms