RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 EIF2AK4Q9P2K8 1649 aaKnown RBP17.23■□□□□ 0.35
LSM2-214ENST00000493387 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
LSM2-214ENST00000493387 GGT6Q6P531 493 aa17.19■□□□□ 0.34
LSM2-214ENST00000493387 KANK1Q14678 1352 aa17.18■□□□□ 0.34
LSM2-214ENST00000493387 RAB3GAP2Q9H2M9 1393 aa17.18■□□□□ 0.34
LSM2-214ENST00000493387 MLECQ14165 292 aa17.16■□□□□ 0.34
LSM2-214ENST00000493387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
LSM2-214ENST00000493387 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
LSM2-214ENST00000493387 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
LSM2-214ENST00000493387 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
LSM2-214ENST00000493387 FAM135AQ9P2D6 1515 aa17.14■□□□□ 0.33
LSM2-214ENST00000493387 NUP155O75694 1391 aa17.14■□□□□ 0.33
LSM2-214ENST00000493387 WASHC2CQ9Y4E1 1318 aa17.13■□□□□ 0.33
LSM2-214ENST00000493387 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
LSM2-214ENST00000493387 UNC13BO14795 1591 aa17.12■□□□□ 0.33
LSM2-214ENST00000493387 DEPDC5O75140 1603 aa17.12■□□□□ 0.33
LSM2-214ENST00000493387 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
LSM2-214ENST00000493387 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
LSM2-214ENST00000493387 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
LSM2-214ENST00000493387 MROH1Q8NDA8 1641 aa17.09■□□□□ 0.33
LSM2-214ENST00000493387 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.32
LSM2-214ENST00000493387 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
LSM2-214ENST00000493387 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
LSM2-214ENST00000493387 ABCC3O15438 1527 aa17.06■□□□□ 0.32
LSM2-214ENST00000493387 ZC3H13Q5T200 1668 aaKnown RBP17.05■□□□□ 0.32
LSM2-214ENST00000493387 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
LSM2-214ENST00000493387 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
LSM2-214ENST00000493387 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
LSM2-214ENST00000493387 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
LSM2-214ENST00000493387 PZPP20742 1482 aa17.02■□□□□ 0.32
LSM2-214ENST00000493387 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.31
LSM2-214ENST00000493387 PKD2Q13563 968 aa17.01■□□□□ 0.31
LSM2-214ENST00000493387 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
LSM2-214ENST00000493387 TET3O43151 1660 aa17.01■□□□□ 0.31
LSM2-214ENST00000493387 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
LSM2-214ENST00000493387 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
LSM2-214ENST00000493387 MROH2AA6NES4 1674 aa16.99■□□□□ 0.31
LSM2-214ENST00000493387 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
LSM2-214ENST00000493387 CEP152O94986 1710 aa16.99■□□□□ 0.31
LSM2-214ENST00000493387 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
LSM2-214ENST00000493387 KDM4FA0A1W2PPD8 638 aa16.98■□□□□ 0.31
LSM2-214ENST00000493387 CAMSAP1Q5T5Y3 1602 aa16.97■□□□□ 0.31
LSM2-214ENST00000493387 NPATQ14207 1427 aa16.96■□□□□ 0.31
LSM2-214ENST00000493387 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
LSM2-214ENST00000493387 PTPRMP28827 1452 aa16.94■□□□□ 0.3
LSM2-214ENST00000493387 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
LSM2-214ENST00000493387 CEBPAP49715 358 aaPredicted RBP16.92■□□□□ 0.3
LSM2-214ENST00000493387 E9PCH4 1651 aa16.91■□□□□ 0.3
LSM2-214ENST00000493387 PTPRTO14522 1441 aa16.91■□□□□ 0.3
LSM2-214ENST00000493387 NOS1P29475 1434 aa16.91■□□□□ 0.3
LSM2-214ENST00000493387 FBXO31Q5XUX0 539 aaPredicted RBP16.91■□□□□ 0.3
LSM2-214ENST00000493387 ERVK-7P63135 1459 aa16.91■□□□□ 0.3
LSM2-214ENST00000493387 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
LSM2-214ENST00000493387 C3P01024 1663 aa16.9■□□□□ 0.3
LSM2-214ENST00000493387 TNRQ92752 1358 aa16.89■□□□□ 0.3
LSM2-214ENST00000493387 FOXD1Q16676 465 aa16.89■□□□□ 0.29
LSM2-214ENST00000493387 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
LSM2-214ENST00000493387 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
LSM2-214ENST00000493387 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
LSM2-214ENST00000493387 ANKRD30BQ9BXX2 1392 aa16.88■□□□□ 0.29
LSM2-214ENST00000493387 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
LSM2-214ENST00000493387 PREX1Q8TCU6 1659 aa16.86■□□□□ 0.29
LSM2-214ENST00000493387 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
LSM2-214ENST00000493387 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
LSM2-214ENST00000493387 PLA2R1Q13018 1463 aa16.85■□□□□ 0.29
LSM2-214ENST00000493387 TRPM2O94759 1503 aa16.85■□□□□ 0.29
LSM2-214ENST00000493387 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
LSM2-214ENST00000493387 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
LSM2-214ENST00000493387 NLRP1Q9C000 1473 aa16.83■□□□□ 0.28
LSM2-214ENST00000493387 IDI1Q13907 227 aa16.82■□□□□ 0.28
LSM2-214ENST00000493387 SYNMO15061 1565 aa16.81■□□□□ 0.28
LSM2-214ENST00000493387 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
LSM2-214ENST00000493387 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
LSM2-214ENST00000493387 A2ML1A8K2U0 1454 aa16.77■□□□□ 0.28
LSM2-214ENST00000493387 PIK3C2BO00750 1634 aa16.77■□□□□ 0.27
LSM2-214ENST00000493387 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
LSM2-214ENST00000493387 THEMISQ8N1K5 641 aaPredicted RBP16.76■□□□□ 0.27
LSM2-214ENST00000493387 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
LSM2-214ENST00000493387 UGGT1Q9NYU2 1555 aa16.74■□□□□ 0.27
LSM2-214ENST00000493387 HDGFP51858 240 aaKnown RBP16.74■□□□□ 0.27
LSM2-214ENST00000493387 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
LSM2-214ENST00000493387 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
LSM2-214ENST00000493387 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
LSM2-214ENST00000493387 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
LSM2-214ENST00000493387 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
LSM2-214ENST00000493387 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
LSM2-214ENST00000493387 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
LSM2-214ENST00000493387 ADGRB3O60242 1522 aa16.72■□□□□ 0.27
LSM2-214ENST00000493387 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.27
LSM2-214ENST00000493387 KIF1BO60333 1816 aa16.71■□□□□ 0.27
LSM2-214ENST00000493387 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
LSM2-214ENST00000493387 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
LSM2-214ENST00000493387 TIMELESSQ9UNS1 1208 aa16.71■□□□□ 0.27
LSM2-214ENST00000493387 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
LSM2-214ENST00000493387 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
LSM2-214ENST00000493387 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
LSM2-214ENST00000493387 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.69■□□□□ 0.26
LSM2-214ENST00000493387 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
LSM2-214ENST00000493387 EID1Q9Y6B2 187 aa16.67■□□□□ 0.26
LSM2-214ENST00000493387 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms