RNA–Protein interactions for RNA: ENST00000490221.5

CCT3-214, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-214ENST00000490221 RIMBP2O15034 1052 aa8.37□□□□□ -1.07
CCT3-214ENST00000490221 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
CCT3-214ENST00000490221 FECHP22830 423 aa8.37□□□□□ -1.07
CCT3-214ENST00000490221 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
CCT3-214ENST00000490221 JPH4Q96JJ6 628 aa8.37□□□□□ -1.07
CCT3-214ENST00000490221 SLC24A3Q9HC58 644 aa8.37□□□□□ -1.07
CCT3-214ENST00000490221 CUX2O14529 1486 aa8.37□□□□□ -1.07
CCT3-214ENST00000490221 EN1Q05925 392 aaPredicted RBP8.36□□□□□ -1.07
CCT3-214ENST00000490221 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
CCT3-214ENST00000490221 NPDC1Q9NQX5 325 aaPredicted RBP8.36□□□□□ -1.07
CCT3-214ENST00000490221 SNPHO15079 494 aa8.35□□□□□ -1.07
CCT3-214ENST00000490221 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
CCT3-214ENST00000490221 ADAM33Q9BZ11 813 aa8.35□□□□□ -1.07
CCT3-214ENST00000490221 SCRIBQ14160 1630 aa8.35□□□□□ -1.07
CCT3-214ENST00000490221 MAP3K7O43318 606 aa8.34□□□□□ -1.07
CCT3-214ENST00000490221 EPAS1Q99814 870 aa8.34□□□□□ -1.07
CCT3-214ENST00000490221 ST18O60284 1047 aa8.33□□□□□ -1.08
CCT3-214ENST00000490221 PTGDRQ13258 359 aa8.33□□□□□ -1.08
CCT3-214ENST00000490221 LCE2DQ5TA82 110 aaPredicted RBP8.33□□□□□ -1.08
CCT3-214ENST00000490221 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
CCT3-214ENST00000490221 ZEB1P37275 1124 aaPredicted RBP8.31□□□□□ -1.08
CCT3-214ENST00000490221 C6orf132Q5T0Z8 1188 aa8.3□□□□□ -1.08
CCT3-214ENST00000490221 FBXW7Q969H0 707 aa8.3□□□□□ -1.08
CCT3-214ENST00000490221 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
CCT3-214ENST00000490221 PCGF6Q9BYE7 350 aa8.3□□□□□ -1.08
CCT3-214ENST00000490221 FCHSD2O94868 740 aa8.29□□□□□ -1.08
CCT3-214ENST00000490221 COL9A1P20849 921 aa8.29□□□□□ -1.08
CCT3-214ENST00000490221 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
CCT3-214ENST00000490221 POTEB3A0JP26 581 aa8.28□□□□□ -1.08
CCT3-214ENST00000490221 GNPATO15228 680 aa8.28□□□□□ -1.08
CCT3-214ENST00000490221 POTEBQ6S5H4 581 aa8.28□□□□□ -1.08
CCT3-214ENST00000490221 HIC1Q14526 733 aa8.27□□□□□ -1.09
CCT3-214ENST00000490221 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
CCT3-214ENST00000490221 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
CCT3-214ENST00000490221 PPP4R3BQ5MIZ7 849 aa8.26□□□□□ -1.09
CCT3-214ENST00000490221 POTEEQ6S8J3 1075 aa8.26□□□□□ -1.09
CCT3-214ENST00000490221 BRPF1P55201 1214 aaPredicted RBP8.25□□□□□ -1.09
CCT3-214ENST00000490221 VARS2Q5ST30 1063 aaKnown RBP8.25□□□□□ -1.09
CCT3-214ENST00000490221 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
CCT3-214ENST00000490221 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
CCT3-214ENST00000490221 IRF6O14896 467 aa8.24□□□□□ -1.09
CCT3-214ENST00000490221 TRIM66O15016 1216 aa8.24□□□□□ -1.09
CCT3-214ENST00000490221 MAP2K5Q13163 448 aa8.24□□□□□ -1.09
CCT3-214ENST00000490221 AK7Q96M32 723 aa8.24□□□□□ -1.09
CCT3-214ENST00000490221 BCL2L12Q9HB09 334 aa8.24□□□□□ -1.09
CCT3-214ENST00000490221 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
CCT3-214ENST00000490221 EMP3P54852 163 aa8.23□□□□□ -1.09
CCT3-214ENST00000490221 PADI6Q6TGC4 694 aa8.23□□□□□ -1.09
CCT3-214ENST00000490221 ERBB3P21860 1342 aa8.23□□□□□ -1.09
CCT3-214ENST00000490221 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
CCT3-214ENST00000490221 PSEN2P49810 448 aa8.22□□□□□ -1.09
CCT3-214ENST00000490221 PHOX2BQ99453 314 aa8.22□□□□□ -1.09
CCT3-214ENST00000490221 AXIN2Q9Y2T1 843 aa8.22□□□□□ -1.09
CCT3-214ENST00000490221 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
CCT3-214ENST00000490221 PSDA5PKW4 1024 aaPredicted RBP8.21□□□□□ -1.1
CCT3-214ENST00000490221 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
CCT3-214ENST00000490221 KCNK17Q96T54 332 aa8.21□□□□□ -1.1
CCT3-214ENST00000490221 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
CCT3-214ENST00000490221 NLRP7Q8WX94 980 aa8.2□□□□□ -1.1
CCT3-214ENST00000490221 RSF1Q96T23 1441 aaPredicted RBP8.2□□□□□ -1.1
CCT3-214ENST00000490221 NCAPD3P42695 1498 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 PTPREP23469 700 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 PRSS12P56730 875 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 NEUROD2Q15784 382 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 PROX2Q3B8N5 592 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 CDCA7LQ96GN5 454 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
CCT3-214ENST00000490221 PDE4DQ08499 809 aa8.18□□□□□ -1.1
CCT3-214ENST00000490221 CDAN1Q8IWY9 1227 aa8.18□□□□□ -1.1
CCT3-214ENST00000490221 HS3ST6Q96QI5 342 aa8.18□□□□□ -1.1
CCT3-214ENST00000490221 ADGRG1Q9Y653 693 aa8.18□□□□□ -1.1
CCT3-214ENST00000490221 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
CCT3-214ENST00000490221 CERKQ8TCT0 537 aa8.16□□□□□ -1.1
CCT3-214ENST00000490221 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
CCT3-214ENST00000490221 AMHR2Q16671 573 aa8.14□□□□□ -1.11
CCT3-214ENST00000490221 METTL3Q86U44 580 aaKnown RBP8.14□□□□□ -1.11
CCT3-214ENST00000490221 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
CCT3-214ENST00000490221 ZNF687Q8N1G0 1237 aa8.14□□□□□ -1.11
CCT3-214ENST00000490221 ZBED2Q9BTP6 218 aa8.14□□□□□ -1.11
CCT3-214ENST00000490221 TRIM6-TRIM34B2RNG4 842 aa8.13□□□□□ -1.11
CCT3-214ENST00000490221 ARHGAP33O14559 1287 aa8.13□□□□□ -1.11
CCT3-214ENST00000490221 KDM4CQ9H3R0 1056 aa8.13□□□□□ -1.11
CCT3-214ENST00000490221 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
CCT3-214ENST00000490221 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
CCT3-214ENST00000490221 SMAPO00193 183 aa8.12□□□□□ -1.11
CCT3-214ENST00000490221 PXYLP1Q8TE99 480 aa8.12□□□□□ -1.11
CCT3-214ENST00000490221 EYA1Q99502 592 aa8.12□□□□□ -1.11
CCT3-214ENST00000490221 HMGXB3Q12766 1538 aa8.12□□□□□ -1.11
CCT3-214ENST00000490221 MDM2Q00987 491 aaPredicted RBP8.11□□□□□ -1.11
CCT3-214ENST00000490221 NUDT18Q6ZVK8 323 aa8.11□□□□□ -1.11
CCT3-214ENST00000490221 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
CCT3-214ENST00000490221 KIAA1468Q9P260 1216 aa8.11□□□□□ -1.11
CCT3-214ENST00000490221 ATAD2BQ9ULI0 1458 aa8.1□□□□□ -1.11
CCT3-214ENST00000490221 PPARGC1BQ86YN6 1023 aaKnown RBP8.09□□□□□ -1.11
CCT3-214ENST00000490221 TATDN2Q93075 761 aa8.09□□□□□ -1.11
CCT3-214ENST00000490221 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
CCT3-214ENST00000490221 THOC2Q8NI27 1593 aaKnown RBP8.09□□□□□ -1.11
CCT3-214ENST00000490221 OATP04181 439 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms