RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 WNT2BQ93097 391 aa8.73□□□□□ -1.01
KDM3A-213ENST00000488971 PHF14O94880 888 aa8.72□□□□□ -1.01
KDM3A-213ENST00000488971 FBXW7Q969H0 707 aa8.72□□□□□ -1.01
KDM3A-213ENST00000488971 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
KDM3A-213ENST00000488971 DPYSL4O14531 572 aa8.71□□□□□ -1.02
KDM3A-213ENST00000488971 THSD4Q6ZMP0 1018 aa8.71□□□□□ -1.02
KDM3A-213ENST00000488971 CAMK2BQ13554 666 aa8.7□□□□□ -1.02
KDM3A-213ENST00000488971 COL9A1P20849 921 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
KDM3A-213ENST00000488971 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
KDM3A-213ENST00000488971 EPAS1Q99814 870 aa8.67□□□□□ -1.02
KDM3A-213ENST00000488971 RBM33Q96EV2 1170 aaKnown RBP8.66□□□□□ -1.02
KDM3A-213ENST00000488971 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
KDM3A-213ENST00000488971 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
KDM3A-213ENST00000488971 DDX12PQ92771 950 aa8.65□□□□□ -1.02
KDM3A-213ENST00000488971 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
KDM3A-213ENST00000488971 PRKCSHP14314 528 aaPredicted RBP8.63□□□□□ -1.03
KDM3A-213ENST00000488971 CFAP44Q96MT7 982 aa8.63□□□□□ -1.03
KDM3A-213ENST00000488971 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
KDM3A-213ENST00000488971 NBR1Q14596 966 aa8.6□□□□□ -1.03
KDM3A-213ENST00000488971 MAP3K7O43318 606 aa8.59□□□□□ -1.03
KDM3A-213ENST00000488971 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
KDM3A-213ENST00000488971 BCAMP50895 628 aa8.59□□□□□ -1.03
KDM3A-213ENST00000488971 ZFRQ96KR1 1074 aaKnown RBP8.59□□□□□ -1.03
KDM3A-213ENST00000488971 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
KDM3A-213ENST00000488971 SEPT9Q9UHD8 586 aaPredicted RBP8.59□□□□□ -1.03
KDM3A-213ENST00000488971 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
KDM3A-213ENST00000488971 TRIM6-TRIM34B2RNG4 842 aa8.58□□□□□ -1.04
KDM3A-213ENST00000488971 IFFO2Q5TF58 517 aa8.58□□□□□ -1.04
KDM3A-213ENST00000488971 SOWAHBA6NEL2 793 aa8.57□□□□□ -1.04
KDM3A-213ENST00000488971 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
KDM3A-213ENST00000488971 PDIA6Q15084 440 aa8.57□□□□□ -1.04
KDM3A-213ENST00000488971 E2F4Q16254 413 aa8.57□□□□□ -1.04
KDM3A-213ENST00000488971 A0A0G2JS52 829 aa8.55□□□□□ -1.04
KDM3A-213ENST00000488971 FAM98CQ17RN3 349 aaKnown RBP8.55□□□□□ -1.04
KDM3A-213ENST00000488971 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
KDM3A-213ENST00000488971 TSHZ2Q9NRE2 1034 aa8.55□□□□□ -1.04
KDM3A-213ENST00000488971 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
KDM3A-213ENST00000488971 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
KDM3A-213ENST00000488971 RGS20O76081 388 aa8.53□□□□□ -1.04
KDM3A-213ENST00000488971 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
KDM3A-213ENST00000488971 TPRNQ4KMQ1 711 aa8.52□□□□□ -1.05
KDM3A-213ENST00000488971 NYAP1Q6ZVC0 841 aa8.52□□□□□ -1.05
KDM3A-213ENST00000488971 WBP1LQ9NX94 342 aa8.52□□□□□ -1.05
KDM3A-213ENST00000488971 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
KDM3A-213ENST00000488971 ITGBL1O95965 494 aaPredicted RBP8.5□□□□□ -1.05
KDM3A-213ENST00000488971 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
KDM3A-213ENST00000488971 TSKSQ9UJT2 592 aa8.5□□□□□ -1.05
KDM3A-213ENST00000488971 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
KDM3A-213ENST00000488971 CDCA7LQ96GN5 454 aa8.49□□□□□ -1.05
KDM3A-213ENST00000488971 PRSS12P56730 875 aa8.48□□□□□ -1.05
KDM3A-213ENST00000488971 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
KDM3A-213ENST00000488971 ARIH1Q9Y4X5 557 aaPredicted RBP8.48□□□□□ -1.05
KDM3A-213ENST00000488971 SMAPO00193 183 aa8.47□□□□□ -1.05
KDM3A-213ENST00000488971 KCNC4Q03721 635 aa8.47□□□□□ -1.05
KDM3A-213ENST00000488971 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
KDM3A-213ENST00000488971 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
KDM3A-213ENST00000488971 PPP4CP60510 307 aa8.46□□□□□ -1.06
KDM3A-213ENST00000488971 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
KDM3A-213ENST00000488971 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
KDM3A-213ENST00000488971 OSBPP22059 807 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 TATDN2Q93075 761 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 CDHR5Q9HBB8 845 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
KDM3A-213ENST00000488971 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
KDM3A-213ENST00000488971 RNF40O75150 1001 aa8.41□□□□□ -1.06
KDM3A-213ENST00000488971 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.06
KDM3A-213ENST00000488971 C3orf80F5H4A9 247 aa8.39□□□□□ -1.07
KDM3A-213ENST00000488971 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
KDM3A-213ENST00000488971 PADI6Q6TGC4 694 aa8.36□□□□□ -1.07
KDM3A-213ENST00000488971 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
KDM3A-213ENST00000488971 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
KDM3A-213ENST00000488971 MTRQ99707 1265 aa8.34□□□□□ -1.07
KDM3A-213ENST00000488971 IL21Q9HBE4 155 aa8.34□□□□□ -1.07
KDM3A-213ENST00000488971 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
KDM3A-213ENST00000488971 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
KDM3A-213ENST00000488971 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
KDM3A-213ENST00000488971 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
KDM3A-213ENST00000488971 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
KDM3A-213ENST00000488971 Q6ZNB5 142 aa8.31□□□□□ -1.08
KDM3A-213ENST00000488971 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
KDM3A-213ENST00000488971 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
KDM3A-213ENST00000488971 APLP1P51693 650 aa8.3□□□□□ -1.08
KDM3A-213ENST00000488971 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
KDM3A-213ENST00000488971 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
KDM3A-213ENST00000488971 COPS2P61201 443 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 EYA1Q99502 592 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
KDM3A-213ENST00000488971 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
KDM3A-213ENST00000488971 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
KDM3A-213ENST00000488971 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
KDM3A-213ENST00000488971 GFRA3O60609 400 aa8.24□□□□□ -1.09
KDM3A-213ENST00000488971 GGCXP38435 758 aa8.24□□□□□ -1.09
KDM3A-213ENST00000488971 PTGDRQ13258 359 aa8.24□□□□□ -1.09
KDM3A-213ENST00000488971 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms