RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
HDLBP-242ENST00000488013 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
HDLBP-242ENST00000488013 KIF3BO15066 747 aa16.29■□□□□ 0.2
HDLBP-242ENST00000488013 KANK1Q14678 1352 aa16.28■□□□□ 0.2
HDLBP-242ENST00000488013 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
HDLBP-242ENST00000488013 REREQ9P2R6 1566 aa16.27■□□□□ 0.2
HDLBP-242ENST00000488013 NUP155O75694 1391 aa16.26■□□□□ 0.19
HDLBP-242ENST00000488013 AGLP35573 1532 aa16.25■□□□□ 0.19
HDLBP-242ENST00000488013 ARHGEF40Q8TER5 1519 aa16.25■□□□□ 0.19
HDLBP-242ENST00000488013 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
HDLBP-242ENST00000488013 DIP2CQ9Y2E4 1556 aa16.25■□□□□ 0.19
HDLBP-242ENST00000488013 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
HDLBP-242ENST00000488013 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
HDLBP-242ENST00000488013 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
HDLBP-242ENST00000488013 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
HDLBP-242ENST00000488013 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
HDLBP-242ENST00000488013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.192e-9■■□□□ 12.4
HDLBP-242ENST00000488013 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
HDLBP-242ENST00000488013 ABCA6Q8N139 1617 aa16.22■□□□□ 0.19
HDLBP-242ENST00000488013 EIF2AK4Q9P2K8 1649 aaKnown RBP16.22■□□□□ 0.19
HDLBP-242ENST00000488013 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
HDLBP-242ENST00000488013 GGT6Q6P531 493 aa16.21■□□□□ 0.19
HDLBP-242ENST00000488013 CCER1Q8TC90 406 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-242ENST00000488013 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
HDLBP-242ENST00000488013 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
HDLBP-242ENST00000488013 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
HDLBP-242ENST00000488013 FAM135AQ9P2D6 1515 aa16.18■□□□□ 0.18
HDLBP-242ENST00000488013 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
HDLBP-242ENST00000488013 KCNA4P22459 653 aa16.15■□□□□ 0.18
HDLBP-242ENST00000488013 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
HDLBP-242ENST00000488013 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.18
HDLBP-242ENST00000488013 UNC13BO14795 1591 aa16.14■□□□□ 0.17
HDLBP-242ENST00000488013 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
HDLBP-242ENST00000488013 PKD2Q13563 968 aa16.13■□□□□ 0.17
HDLBP-242ENST00000488013 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
HDLBP-242ENST00000488013 PZPP20742 1482 aa16.12■□□□□ 0.17
HDLBP-242ENST00000488013 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
HDLBP-242ENST00000488013 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
HDLBP-242ENST00000488013 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
HDLBP-242ENST00000488013 MLECQ14165 292 aa16.1■□□□□ 0.17
HDLBP-242ENST00000488013 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
HDLBP-242ENST00000488013 RPRD2Q5VT52 1461 aaKnown RBP16.09■□□□□ 0.17
HDLBP-242ENST00000488013 IQGAP3Q86VI3 1631 aa16.08■□□□□ 0.16
HDLBP-242ENST00000488013 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-242ENST00000488013 ABCC3O15438 1527 aa16.06■□□□□ 0.16
HDLBP-242ENST00000488013 TIMELESSQ9UNS1 1208 aa16.06■□□□□ 0.16
HDLBP-242ENST00000488013 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
HDLBP-242ENST00000488013 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
HDLBP-242ENST00000488013 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
HDLBP-242ENST00000488013 ZC3H13Q5T200 1668 aaKnown RBP16.02■□□□□ 0.16
HDLBP-242ENST00000488013 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
HDLBP-242ENST00000488013 PTPRTO14522 1441 aa16.02■□□□□ 0.15
HDLBP-242ENST00000488013 NPATQ14207 1427 aa16.02■□□□□ 0.15
HDLBP-242ENST00000488013 EFCAB6Q5THR3 1501 aa16.01■□□□□ 0.15
HDLBP-242ENST00000488013 TET3O43151 1660 aa16.01■□□□□ 0.15
HDLBP-242ENST00000488013 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
HDLBP-242ENST00000488013 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
HDLBP-242ENST00000488013 NOS1P29475 1434 aa15.97■□□□□ 0.15
HDLBP-242ENST00000488013 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
HDLBP-242ENST00000488013 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
HDLBP-242ENST00000488013 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
HDLBP-242ENST00000488013 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
HDLBP-242ENST00000488013 PLA2R1Q13018 1463 aa15.94■□□□□ 0.14
HDLBP-242ENST00000488013 TRPM2O94759 1503 aa15.94■□□□□ 0.14
HDLBP-242ENST00000488013 SIGLEC1Q9BZZ2 1709 aa15.93■□□□□ 0.14
HDLBP-242ENST00000488013 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
HDLBP-242ENST00000488013 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
HDLBP-242ENST00000488013 SIN3AQ96ST3 1273 aa15.92■□□□□ 0.14
HDLBP-242ENST00000488013 CAMSAP1Q5T5Y3 1602 aa15.92■□□□□ 0.14
HDLBP-242ENST00000488013 TNRQ92752 1358 aa15.91■□□□□ 0.14
HDLBP-242ENST00000488013 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
HDLBP-242ENST00000488013 FBXO31Q5XUX0 539 aaPredicted RBP15.91■□□□□ 0.14
HDLBP-242ENST00000488013 MROH2AA6NES4 1674 aa15.89■□□□□ 0.13
HDLBP-242ENST00000488013 E9PCH4 1651 aa15.89■□□□□ 0.13
HDLBP-242ENST00000488013 SPATA31D1Q6ZQQ2 1576 aa15.88■□□□□ 0.13
HDLBP-242ENST00000488013 IDI1Q13907 227 aa15.88■□□□□ 0.13
HDLBP-242ENST00000488013 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
HDLBP-242ENST00000488013 ADAMTSL3P82987 1691 aa15.88■□□□□ 0.13
HDLBP-242ENST00000488013 RPGRIP1LQ68CZ1 1315 aa15.88■□□□□ 0.13
HDLBP-242ENST00000488013 CLTCQ00610 1675 aaKnown RBP15.87■□□□□ 0.13
HDLBP-242ENST00000488013 NLRP1Q9C000 1473 aa15.87■□□□□ 0.13
HDLBP-242ENST00000488013 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
HDLBP-242ENST00000488013 CEP152O94986 1710 aa15.87■□□□□ 0.13
HDLBP-242ENST00000488013 CEBPAP49715 358 aaPredicted RBP15.86■□□□□ 0.13
HDLBP-242ENST00000488013 NEURL4Q96JN8 1562 aa15.85■□□□□ 0.13
HDLBP-242ENST00000488013 PTPRMP28827 1452 aa15.84■□□□□ 0.13
HDLBP-242ENST00000488013 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
HDLBP-242ENST00000488013 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
HDLBP-242ENST00000488013 MADDQ8WXG6 1647 aa15.83■□□□□ 0.13
HDLBP-242ENST00000488013 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.12
HDLBP-242ENST00000488013 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
HDLBP-242ENST00000488013 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
HDLBP-242ENST00000488013 THEMISQ8N1K5 641 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-242ENST00000488013 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
HDLBP-242ENST00000488013 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
HDLBP-242ENST00000488013 ZNF326Q5BKZ1 582 aaKnown RBP15.81■□□□□ 0.12
HDLBP-242ENST00000488013 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-242ENST00000488013 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-242ENST00000488013 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
HDLBP-242ENST00000488013 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms