RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 PPP1R15BQ5SWA1 713 aa9.85□□□□□ -0.83
R3HDM1-218ENST00000487294 DDX27Q96GQ7 796 aaKnown RBP9.83□□□□□ -0.84
R3HDM1-218ENST00000487294 TSHZ2Q9NRE2 1034 aa9.83□□□□□ -0.84
R3HDM1-218ENST00000487294 HRO43593 1189 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 KCNH8Q96L42 1107 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 CFTRP13569 1480 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 CEP164Q9UPV0 1460 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 WIZO95785 1651 aa9.82□□□□□ -0.84
R3HDM1-218ENST00000487294 PSEN2P49810 448 aa9.81□□□□□ -0.84
R3HDM1-218ENST00000487294 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
R3HDM1-218ENST00000487294 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
R3HDM1-218ENST00000487294 KCNK17Q96T54 332 aa9.77□□□□□ -0.85
R3HDM1-218ENST00000487294 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
R3HDM1-218ENST00000487294 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
R3HDM1-218ENST00000487294 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
R3HDM1-218ENST00000487294 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
R3HDM1-218ENST00000487294 EMILIN3Q9NT22 766 aa9.74□□□□□ -0.85
R3HDM1-218ENST00000487294 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
R3HDM1-218ENST00000487294 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
R3HDM1-218ENST00000487294 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
R3HDM1-218ENST00000487294 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
R3HDM1-218ENST00000487294 SLC4A5Q9BY07 1137 aa9.73□□□□□ -0.85
R3HDM1-218ENST00000487294 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
R3HDM1-218ENST00000487294 FOSBP53539 338 aa9.71□□□□□ -0.86
R3HDM1-218ENST00000487294 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
R3HDM1-218ENST00000487294 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
R3HDM1-218ENST00000487294 WDR70Q9NW82 654 aa9.7□□□□□ -0.86
R3HDM1-218ENST00000487294 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
R3HDM1-218ENST00000487294 PTPREP23469 700 aa9.68□□□□□ -0.86
R3HDM1-218ENST00000487294 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
R3HDM1-218ENST00000487294 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
R3HDM1-218ENST00000487294 E2F4Q16254 413 aa9.67□□□□□ -0.86
R3HDM1-218ENST00000487294 PRDM2Q13029 1718 aa9.67□□□□□ -0.86
R3HDM1-218ENST00000487294 EVI5O60447 810 aa9.65□□□□□ -0.86
R3HDM1-218ENST00000487294 IFT140Q96RY7 1462 aa9.65□□□□□ -0.87
R3HDM1-218ENST00000487294 BHMG1C9JSJ3 638 aaPredicted RBP9.63□□□□□ -0.87
R3HDM1-218ENST00000487294 DPYSL4O14531 572 aa9.63□□□□□ -0.87
R3HDM1-218ENST00000487294 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
R3HDM1-218ENST00000487294 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
R3HDM1-218ENST00000487294 ABCC8Q09428 1581 aa9.63□□□□□ -0.87
R3HDM1-218ENST00000487294 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
R3HDM1-218ENST00000487294 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
R3HDM1-218ENST00000487294 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
R3HDM1-218ENST00000487294 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
R3HDM1-218ENST00000487294 CCDC88BA6NC98 1476 aa9.61□□□□□ -0.87
R3HDM1-218ENST00000487294 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
R3HDM1-218ENST00000487294 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
R3HDM1-218ENST00000487294 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
R3HDM1-218ENST00000487294 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
R3HDM1-218ENST00000487294 NBPF3Q9H094 633 aa9.6□□□□□ -0.87
R3HDM1-218ENST00000487294 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
R3HDM1-218ENST00000487294 GOLGA8CPA6NN73 597 aa9.59□□□□□ -0.87
R3HDM1-218ENST00000487294 IFFO2Q5TF58 517 aa9.59□□□□□ -0.87
R3HDM1-218ENST00000487294 KDM2AQ9Y2K7 1162 aa9.59□□□□□ -0.87
R3HDM1-218ENST00000487294 ARIH1Q9Y4X5 557 aaPredicted RBP9.59□□□□□ -0.87
R3HDM1-218ENST00000487294 PTPN5P54829 565 aa9.58□□□□□ -0.88
R3HDM1-218ENST00000487294 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
R3HDM1-218ENST00000487294 WNT2BQ93097 391 aa9.57□□□□□ -0.88
R3HDM1-218ENST00000487294 EIF4G3O43432 1585 aaKnown RBP9.56□□□□□ -0.88
R3HDM1-218ENST00000487294 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
R3HDM1-218ENST00000487294 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
R3HDM1-218ENST00000487294 RGS20O76081 388 aa9.55□□□□□ -0.88
R3HDM1-218ENST00000487294 PDIA6Q15084 440 aa9.55□□□□□ -0.88
R3HDM1-218ENST00000487294 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
R3HDM1-218ENST00000487294 TARBP1Q13395 1621 aaKnown RBP9.55□□□□□ -0.88
R3HDM1-218ENST00000487294 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
R3HDM1-218ENST00000487294 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
R3HDM1-218ENST00000487294 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
R3HDM1-218ENST00000487294 PHF14O94880 888 aa9.52□□□□□ -0.89
R3HDM1-218ENST00000487294 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
R3HDM1-218ENST00000487294 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
R3HDM1-218ENST00000487294 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-218ENST00000487294 AQRO60306 1485 aaKnown RBP eCLIP9.51□□□□□ -0.89
R3HDM1-218ENST00000487294 POLA1P09884 1462 aaPredicted RBP9.5□□□□□ -0.89
R3HDM1-218ENST00000487294 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
R3HDM1-218ENST00000487294 ARAP1Q96P48 1450 aa9.49□□□□□ -0.89
R3HDM1-218ENST00000487294 CYB5RLQ6IPT4 315 aa9.49□□□□□ -0.89
R3HDM1-218ENST00000487294 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
R3HDM1-218ENST00000487294 DDX12PQ92771 950 aa9.49□□□□□ -0.89
R3HDM1-218ENST00000487294 CHD1O14646 1710 aa9.48□□□□□ -0.89
R3HDM1-218ENST00000487294 A0A0G2JS52 829 aa9.48□□□□□ -0.89
R3HDM1-218ENST00000487294 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
R3HDM1-218ENST00000487294 ANKK1Q8NFD2 765 aa9.48□□□□□ -0.89
R3HDM1-218ENST00000487294 COL9A1P20849 921 aa9.47□□□□□ -0.89
R3HDM1-218ENST00000487294 PROX2Q3B8N5 592 aa9.47□□□□□ -0.89
R3HDM1-218ENST00000487294 EPAS1Q99814 870 aa9.47□□□□□ -0.89
R3HDM1-218ENST00000487294 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
R3HDM1-218ENST00000487294 SOGA1O94964 1423 aa9.45□□□□□ -0.9
R3HDM1-218ENST00000487294 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
R3HDM1-218ENST00000487294 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
R3HDM1-218ENST00000487294 RAD54L2Q9Y4B4 1467 aa9.43□□□□□ -0.9
R3HDM1-218ENST00000487294 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
R3HDM1-218ENST00000487294 NBR1Q14596 966 aa9.43□□□□□ -0.9
R3HDM1-218ENST00000487294 NYAP1Q6ZVC0 841 aa9.43□□□□□ -0.9
R3HDM1-218ENST00000487294 TDRD9Q8NDG6 1382 aaKnown RBP9.42□□□□□ -0.9
R3HDM1-218ENST00000487294 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
R3HDM1-218ENST00000487294 SOWAHBA6NEL2 793 aa9.41□□□□□ -0.9
R3HDM1-218ENST00000487294 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms