RNA–Protein interactions for RNA: ENST00000484937.5

PATJ-208, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 4,990 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-208ENST00000484937 EVC2Q86UK5 1308 aa11.33□□□□□ -0.6
PATJ-208ENST00000484937 E9PSI1 815 aa11.33□□□□□ -0.6
PATJ-208ENST00000484937 CGNL1Q0VF96 1302 aa11.33□□□□□ -0.6
PATJ-208ENST00000484937 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
PATJ-208ENST00000484937 CENPQQ7L2Z9 268 aaPredicted RBP11.33□□□□□ -0.6
PATJ-208ENST00000484937 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
PATJ-208ENST00000484937 DEKP35659 375 aaKnown RBP11.32□□□□□ -0.6
PATJ-208ENST00000484937 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
PATJ-208ENST00000484937 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
PATJ-208ENST00000484937 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
PATJ-208ENST00000484937 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
PATJ-208ENST00000484937 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
PATJ-208ENST00000484937 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
PATJ-208ENST00000484937 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
PATJ-208ENST00000484937 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
PATJ-208ENST00000484937 ARAP1Q96P48 1450 aa11.3□□□□□ -0.6
PATJ-208ENST00000484937 ANKRD50Q9ULJ7 1429 aa11.3□□□□□ -0.6
PATJ-208ENST00000484937 RRP1P56182 461 aaKnown RBP11.29□□□□□ -0.6
PATJ-208ENST00000484937 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
PATJ-208ENST00000484937 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
PATJ-208ENST00000484937 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
PATJ-208ENST00000484937 GPATCH3Q96I76 525 aa11.28□□□□□ -0.6
PATJ-208ENST00000484937 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
PATJ-208ENST00000484937 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
PATJ-208ENST00000484937 NPHP1O15259 732 aa11.28□□□□□ -0.6
PATJ-208ENST00000484937 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.6
PATJ-208ENST00000484937 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.6
PATJ-208ENST00000484937 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
PATJ-208ENST00000484937 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
PATJ-208ENST00000484937 USP35Q9P2H5 1018 aa11.27□□□□□ -0.61
PATJ-208ENST00000484937 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
PATJ-208ENST00000484937 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
PATJ-208ENST00000484937 ZKSCAN2Q63HK3 967 aa11.26□□□□□ -0.61
PATJ-208ENST00000484937 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
PATJ-208ENST00000484937 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
PATJ-208ENST00000484937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
PATJ-208ENST00000484937 AMPHP49418 695 aa11.25□□□□□ -0.61
PATJ-208ENST00000484937 AAMPQ13685 434 aa11.25□□□□□ -0.61
PATJ-208ENST00000484937 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
PATJ-208ENST00000484937 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
PATJ-208ENST00000484937 APBB1O00213 710 aa11.25□□□□□ -0.61
PATJ-208ENST00000484937 CSB-PGBD3P0DP91 1061 aa11.25□□□□□ -0.61
PATJ-208ENST00000484937 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
PATJ-208ENST00000484937 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
PATJ-208ENST00000484937 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
PATJ-208ENST00000484937 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
PATJ-208ENST00000484937 COG3Q96JB2 828 aa11.24□□□□□ -0.61
PATJ-208ENST00000484937 BRD4O60885 1362 aaPredicted RBP11.24□□□□□ -0.61
PATJ-208ENST00000484937 SYNJ2O15056 1496 aa11.24□□□□□ -0.61
PATJ-208ENST00000484937 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
PATJ-208ENST00000484937 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
PATJ-208ENST00000484937 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
PATJ-208ENST00000484937 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
PATJ-208ENST00000484937 WASHC2AQ641Q2 1341 aa11.23□□□□□ -0.61
PATJ-208ENST00000484937 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
PATJ-208ENST00000484937 IFT140Q96RY7 1462 aa11.23□□□□□ -0.61
PATJ-208ENST00000484937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.23□□□□□ -0.61
PATJ-208ENST00000484937 PDE4AP27815 886 aa11.22□□□□□ -0.61
PATJ-208ENST00000484937 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
PATJ-208ENST00000484937 PLEKHH2Q8IVE3 1493 aa11.22□□□□□ -0.61
PATJ-208ENST00000484937 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
PATJ-208ENST00000484937 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.22□□□□□ -0.61
PATJ-208ENST00000484937 TIAM1Q13009 1591 aa11.22□□□□□ -0.61
PATJ-208ENST00000484937 ST18O60284 1047 aa11.21□□□□□ -0.61
PATJ-208ENST00000484937 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
PATJ-208ENST00000484937 TOPBP1Q92547 1522 aa11.21□□□□□ -0.61
PATJ-208ENST00000484937 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.61
PATJ-208ENST00000484937 APAF1O14727 1248 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 DDX19BQ9UMR2 479 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 HECW1Q76N89 1606 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 GOLGA6L3A6NEY3 463 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
PATJ-208ENST00000484937 CRBNQ96SW2 442 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
PATJ-208ENST00000484937 SLC4A10Q6U841 1118 aa11.19□□□□□ -0.62
PATJ-208ENST00000484937 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
PATJ-208ENST00000484937 GNL2Q13823 731 aaKnown RBP11.19□□□□□ -0.62
PATJ-208ENST00000484937 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
PATJ-208ENST00000484937 KIAA2012Q0VF49 1180 aa11.19□□□□□ -0.62
PATJ-208ENST00000484937 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
PATJ-208ENST00000484937 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
PATJ-208ENST00000484937 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
PATJ-208ENST00000484937 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
PATJ-208ENST00000484937 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
PATJ-208ENST00000484937 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
PATJ-208ENST00000484937 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
PATJ-208ENST00000484937 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
PATJ-208ENST00000484937 ARHGAP5Q13017 1502 aa11.18□□□□□ -0.62
PATJ-208ENST00000484937 DRC7Q8IY82 874 aa11.18□□□□□ -0.62
PATJ-208ENST00000484937 KIF3AQ9Y496 699 aa11.17□□□□□ -0.62
PATJ-208ENST00000484937 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
PATJ-208ENST00000484937 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
PATJ-208ENST00000484937 SCAPERQ9BY12 1400 aa11.17□□□□□ -0.62
PATJ-208ENST00000484937 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
PATJ-208ENST00000484937 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
PATJ-208ENST00000484937 PHF14O94880 888 aa11.16□□□□□ -0.62
PATJ-208ENST00000484937 DZIP1LQ8IYY4 767 aaKnown RBP11.16□□□□□ -0.62
PATJ-208ENST00000484937 PLIN1O60240 522 aa11.16□□□□□ -0.62
PATJ-208ENST00000484937 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms