RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 CDHR5Q9HBB8 845 aa12.84□□□□□ -0.35
ATP13A3-207ENST00000484023 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
ATP13A3-207ENST00000484023 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
ATP13A3-207ENST00000484023 PSEN2P49810 448 aa12.82□□□□□ -0.36
ATP13A3-207ENST00000484023 C6orf132Q5T0Z8 1188 aa12.82□□□□□ -0.36
ATP13A3-207ENST00000484023 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
ATP13A3-207ENST00000484023 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
ATP13A3-207ENST00000484023 COL9A1P20849 921 aa12.79□□□□□ -0.36
ATP13A3-207ENST00000484023 PTPREP23469 700 aa12.79□□□□□ -0.36
ATP13A3-207ENST00000484023 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
ATP13A3-207ENST00000484023 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
ATP13A3-207ENST00000484023 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
ATP13A3-207ENST00000484023 NPDC1Q9NQX5 325 aaPredicted RBP12.76□□□□□ -0.37
ATP13A3-207ENST00000484023 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
ATP13A3-207ENST00000484023 KRTAP3-3Q9BYR6 98 aa12.74□□□□□ -0.37
ATP13A3-207ENST00000484023 KRTAP3-2Q9BYR7 98 aa12.74□□□□□ -0.37
ATP13A3-207ENST00000484023 GPR37O15354 613 aa12.73□□□□□ -0.37
ATP13A3-207ENST00000484023 PBX2P40425 430 aa12.73□□□□□ -0.37
ATP13A3-207ENST00000484023 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
ATP13A3-207ENST00000484023 PTGDRQ13258 359 aa12.72□□□□□ -0.37
ATP13A3-207ENST00000484023 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
ATP13A3-207ENST00000484023 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
ATP13A3-207ENST00000484023 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
ATP13A3-207ENST00000484023 FCHSD2O94868 740 aa12.68□□□□□ -0.38
ATP13A3-207ENST00000484023 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATP13A3-207ENST00000484023 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
ATP13A3-207ENST00000484023 FECHP22830 423 aa12.66□□□□□ -0.38
ATP13A3-207ENST00000484023 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
ATP13A3-207ENST00000484023 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
ATP13A3-207ENST00000484023 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
ATP13A3-207ENST00000484023 PRSS12P56730 875 aa12.64□□□□□ -0.39
ATP13A3-207ENST00000484023 PADI6Q6TGC4 694 aa12.64□□□□□ -0.39
ATP13A3-207ENST00000484023 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
ATP13A3-207ENST00000484023 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
ATP13A3-207ENST00000484023 HIC1Q14526 733 aa12.63□□□□□ -0.39
ATP13A3-207ENST00000484023 GNPATO15228 680 aa12.62□□□□□ -0.39
ATP13A3-207ENST00000484023 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
ATP13A3-207ENST00000484023 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
ATP13A3-207ENST00000484023 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
ATP13A3-207ENST00000484023 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
ATP13A3-207ENST00000484023 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
ATP13A3-207ENST00000484023 ZMYND10O75800 440 aa12.59□□□□□ -0.39
ATP13A3-207ENST00000484023 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
ATP13A3-207ENST00000484023 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
ATP13A3-207ENST00000484023 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
ATP13A3-207ENST00000484023 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
ATP13A3-207ENST00000484023 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
ATP13A3-207ENST00000484023 TK2O00142 265 aa12.57□□□□□ -0.4
ATP13A3-207ENST00000484023 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
ATP13A3-207ENST00000484023 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
ATP13A3-207ENST00000484023 HRO43593 1189 aa12.54□□□□□ -0.4
ATP13A3-207ENST00000484023 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
ATP13A3-207ENST00000484023 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
ATP13A3-207ENST00000484023 SMAPO00193 183 aa12.53□□□□□ -0.4
ATP13A3-207ENST00000484023 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
ATP13A3-207ENST00000484023 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
ATP13A3-207ENST00000484023 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
ATP13A3-207ENST00000484023 PACS2Q86VP3 889 aa12.52□□□□□ -0.41
ATP13A3-207ENST00000484023 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
ATP13A3-207ENST00000484023 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
ATP13A3-207ENST00000484023 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
ATP13A3-207ENST00000484023 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
ATP13A3-207ENST00000484023 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
ATP13A3-207ENST00000484023 TATDN2Q93075 761 aa12.5□□□□□ -0.41
ATP13A3-207ENST00000484023 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
ATP13A3-207ENST00000484023 IRF6O14896 467 aa12.48□□□□□ -0.41
ATP13A3-207ENST00000484023 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
ATP13A3-207ENST00000484023 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
ATP13A3-207ENST00000484023 CCDC102AQ96A19 550 aa12.47□□□□□ -0.41
ATP13A3-207ENST00000484023 EYA1Q99502 592 aa12.46□□□□□ -0.41
ATP13A3-207ENST00000484023 PHOX2BQ99453 314 aa12.45□□□□□ -0.42
ATP13A3-207ENST00000484023 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
ATP13A3-207ENST00000484023 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
ATP13A3-207ENST00000484023 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
ATP13A3-207ENST00000484023 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
ATP13A3-207ENST00000484023 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
ATP13A3-207ENST00000484023 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
ATP13A3-207ENST00000484023 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
ATP13A3-207ENST00000484023 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
ATP13A3-207ENST00000484023 OATP04181 439 aa12.41□□□□□ -0.42
ATP13A3-207ENST00000484023 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
ATP13A3-207ENST00000484023 RCCD1A6NED2 376 aa12.39□□□□□ -0.43
ATP13A3-207ENST00000484023 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
ATP13A3-207ENST00000484023 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
ATP13A3-207ENST00000484023 AK7Q96M32 723 aa12.38□□□□□ -0.43
ATP13A3-207ENST00000484023 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
ATP13A3-207ENST00000484023 TRIM66O15016 1216 aa12.35□□□□□ -0.43
ATP13A3-207ENST00000484023 DNAJB2P25686 324 aa12.35□□□□□ -0.43
ATP13A3-207ENST00000484023 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
ATP13A3-207ENST00000484023 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
ATP13A3-207ENST00000484023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
ATP13A3-207ENST00000484023 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
ATP13A3-207ENST00000484023 KCTD12Q96CX2 325 aaKnown RBP12.33□□□□□ -0.44
ATP13A3-207ENST00000484023 WNT2BQ93097 391 aa12.32□□□□□ -0.44
ATP13A3-207ENST00000484023 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
ATP13A3-207ENST00000484023 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
ATP13A3-207ENST00000484023 BCAMP50895 628 aa12.3□□□□□ -0.44
ATP13A3-207ENST00000484023 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
ATP13A3-207ENST00000484023 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
ATP13A3-207ENST00000484023 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms