RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 MAGI2Q86UL8 1455 aa14.77□□□□□ -0.04
HDAC6-226ENST00000483656 ABCA6Q8N139 1617 aa14.77□□□□□ -0.05
HDAC6-226ENST00000483656 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
HDAC6-226ENST00000483656 A2MP01023 1474 aa14.76□□□□□ -0.05
HDAC6-226ENST00000483656 ANKRD30BQ9BXX2 1392 aa14.75□□□□□ -0.05
HDAC6-226ENST00000483656 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
HDAC6-226ENST00000483656 DIP2CQ9Y2E4 1556 aa14.74□□□□□ -0.05
HDAC6-226ENST00000483656 NEUROD1Q13562 356 aa14.74□□□□□ -0.05
HDAC6-226ENST00000483656 PKD2Q13563 968 aa14.74□□□□□ -0.05
HDAC6-226ENST00000483656 FAM135AQ9P2D6 1515 aa14.74□□□□□ -0.05
HDAC6-226ENST00000483656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.052e-7■■□□□ 14
HDAC6-226ENST00000483656 DEPDC5O75140 1603 aa14.73□□□□□ -0.05
HDAC6-226ENST00000483656 IQGAP3Q86VI3 1631 aa14.73□□□□□ -0.05
HDAC6-226ENST00000483656 EIF2AK4Q9P2K8 1649 aaKnown RBP14.73□□□□□ -0.05
HDAC6-226ENST00000483656 KIF3BO15066 747 aa14.72□□□□□ -0.05
HDAC6-226ENST00000483656 MROH1Q8NDA8 1641 aa14.71□□□□□ -0.05
HDAC6-226ENST00000483656 VWDEQ8N2E2 1590 aa14.71□□□□□ -0.05
HDAC6-226ENST00000483656 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
HDAC6-226ENST00000483656 RNF17Q9BXT8 1623 aaKnown RBP14.68□□□□□ -0.06
HDAC6-226ENST00000483656 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
HDAC6-226ENST00000483656 PRDM15P57071 1507 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-226ENST00000483656 ATP10AO60312 1499 aa14.66□□□□□ -0.06
HDAC6-226ENST00000483656 PLA2R1Q13018 1463 aa14.65□□□□□ -0.06
HDAC6-226ENST00000483656 RPRD2Q5VT52 1461 aaKnown RBP14.65□□□□□ -0.06
HDAC6-226ENST00000483656 REREQ9P2R6 1566 aa14.64□□□□□ -0.07
HDAC6-226ENST00000483656 KANK1Q14678 1352 aa14.63□□□□□ -0.07
HDAC6-226ENST00000483656 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-226ENST00000483656 TONSLQ96HA7 1378 aa14.62□□□□□ -0.07
HDAC6-226ENST00000483656 LMTK2Q8IWU2 1503 aa14.62□□□□□ -0.07
HDAC6-226ENST00000483656 TET3O43151 1660 aa14.62□□□□□ -0.07
HDAC6-226ENST00000483656 E9PCH4 1651 aa14.61□□□□□ -0.07
HDAC6-226ENST00000483656 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
HDAC6-226ENST00000483656 GGT6Q6P531 493 aa14.61□□□□□ -0.07
HDAC6-226ENST00000483656 AGLP35573 1532 aa14.61□□□□□ -0.07
HDAC6-226ENST00000483656 SIGLEC1Q9BZZ2 1709 aa14.61□□□□□ -0.07
HDAC6-226ENST00000483656 L3MBTL2Q969R5 705 aa14.59□□□□□ -0.07
HDAC6-226ENST00000483656 PTPRTO14522 1441 aa14.58□□□□□ -0.07
HDAC6-226ENST00000483656 CEP152O94986 1710 aa14.58□□□□□ -0.07
HDAC6-226ENST00000483656 ABCC3O15438 1527 aa14.58□□□□□ -0.08
HDAC6-226ENST00000483656 EFCAB6Q5THR3 1501 aa14.57□□□□□ -0.08
HDAC6-226ENST00000483656 WASHC2CQ9Y4E1 1318 aa14.55□□□□□ -0.08
HDAC6-226ENST00000483656 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
HDAC6-226ENST00000483656 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
HDAC6-226ENST00000483656 TRPM2O94759 1503 aa14.54□□□□□ -0.08
HDAC6-226ENST00000483656 SPHKAPQ2M3C7 1700 aa14.53□□□□□ -0.08
HDAC6-226ENST00000483656 NPATQ14207 1427 aa14.53□□□□□ -0.08
HDAC6-226ENST00000483656 CAMSAP1Q5T5Y3 1602 aa14.52□□□□□ -0.09
HDAC6-226ENST00000483656 ZC3H13Q5T200 1668 aaKnown RBP14.51□□□□□ -0.09
HDAC6-226ENST00000483656 ARHGAP31Q2M1Z3 1444 aa14.5□□□□□ -0.09
HDAC6-226ENST00000483656 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
HDAC6-226ENST00000483656 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
HDAC6-226ENST00000483656 CLTCL1P53675 1640 aa14.5□□□□□ -0.09
HDAC6-226ENST00000483656 NOS1P29475 1434 aa14.49□□□□□ -0.09
HDAC6-226ENST00000483656 SPATA31E1Q6ZUB1 1445 aa14.49□□□□□ -0.09
HDAC6-226ENST00000483656 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-226ENST00000483656 MLECQ14165 292 aa14.48□□□□□ -0.09
HDAC6-226ENST00000483656 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
HDAC6-226ENST00000483656 CNTLNQ9NXG0 1405 aa14.46□□□□□ -0.09
HDAC6-226ENST00000483656 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
HDAC6-226ENST00000483656 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
HDAC6-226ENST00000483656 CLTCQ00610 1675 aaKnown RBP14.45□□□□□ -0.1
HDAC6-226ENST00000483656 SYNMO15061 1565 aa14.44□□□□□ -0.1
HDAC6-226ENST00000483656 DCAF11Q8TEB1 546 aa14.44□□□□□ -0.1
HDAC6-226ENST00000483656 FBXO41Q8TF61 875 aa14.44□□□□□ -0.1
HDAC6-226ENST00000483656 ARID4BQ4LE39 1312 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-226ENST00000483656 CFAP65Q6ZU64 1925 aaKnown RBP14.43□□□□□ -0.1
HDAC6-226ENST00000483656 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
HDAC6-226ENST00000483656 FBXO31Q5XUX0 539 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-226ENST00000483656 KDM2AQ9Y2K7 1162 aa14.42□□□□□ -0.1
HDAC6-226ENST00000483656 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
HDAC6-226ENST00000483656 PREX1Q8TCU6 1659 aa14.41□□□□□ -0.1
HDAC6-226ENST00000483656 ERVK-7P63135 1459 aa14.4□□□□□ -0.1
HDAC6-226ENST00000483656 ZMYM3Q14202 1370 aa14.39□□□□□ -0.11
HDAC6-226ENST00000483656 ADGRB3O60242 1522 aa14.39□□□□□ -0.11
HDAC6-226ENST00000483656 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
HDAC6-226ENST00000483656 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
HDAC6-226ENST00000483656 IDI1Q13907 227 aa14.38□□□□□ -0.11
HDAC6-226ENST00000483656 ZNF326Q5BKZ1 582 aaKnown RBP14.38□□□□□ -0.11
HDAC6-226ENST00000483656 KIF1BO60333 1816 aa14.38□□□□□ -0.11
HDAC6-226ENST00000483656 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
HDAC6-226ENST00000483656 RALGAPBQ86X10 1494 aa14.37□□□□□ -0.11
HDAC6-226ENST00000483656 SLC52A1Q9NWF4 448 aa14.36□□□□□ -0.11
HDAC6-226ENST00000483656 LMTK3Q96Q04 1460 aa14.36□□□□□ -0.11
HDAC6-226ENST00000483656 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-226ENST00000483656 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
HDAC6-226ENST00000483656 HSPA5P11021 654 aaKnown RBP14.34□□□□□ -0.11
HDAC6-226ENST00000483656 STAC3Q96MF2 364 aa14.34□□□□□ -0.11
HDAC6-226ENST00000483656 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.11
HDAC6-226ENST00000483656 IFT172Q9UG01 1749 aa14.33□□□□□ -0.12
HDAC6-226ENST00000483656 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
HDAC6-226ENST00000483656 MADDQ8WXG6 1647 aa14.33□□□□□ -0.12
HDAC6-226ENST00000483656 MYOM2P54296 1465 aa14.32□□□□□ -0.12
HDAC6-226ENST00000483656 TMEM131LA2VDJ0 1609 aa14.31□□□□□ -0.12
HDAC6-226ENST00000483656 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC6-226ENST00000483656 NBPF1Q3BBV0 1214 aa14.31□□□□□ -0.12
HDAC6-226ENST00000483656 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
HDAC6-226ENST00000483656 ADGRF5Q8IZF2 1346 aa14.31□□□□□ -0.12
HDAC6-226ENST00000483656 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
HDAC6-226ENST00000483656 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
HDAC6-226ENST00000483656 SOCS7O14512 581 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms