RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ESF1Q9H501 851 aaKnown RBP29.8■■■□□ 2.36
TRAPPC12-220ENST00000482645 MADDQ8WXG6 1647 aa29.79■■■□□ 2.36
TRAPPC12-220ENST00000482645 FER1L4A9Z1Z3 1794 aa29.79■■■□□ 2.36
TRAPPC12-220ENST00000482645 ADAMTSL3P82987 1691 aa29.78■■■□□ 2.36
TRAPPC12-220ENST00000482645 SETD5Q9C0A6 1442 aa29.77■■■□□ 2.36
TRAPPC12-220ENST00000482645 MROH1Q8NDA8 1641 aa29.77■■■□□ 2.36
TRAPPC12-220ENST00000482645 DEPDC5O75140 1603 aa29.76■■■□□ 2.35
TRAPPC12-220ENST00000482645 KDM4FA0A1W2PPD8 638 aa29.75■■■□□ 2.35
TRAPPC12-220ENST00000482645 PRDM15P57071 1507 aaPredicted RBP29.74■■■□□ 2.35
TRAPPC12-220ENST00000482645 WASHC2CQ9Y4E1 1318 aa29.73■■■□□ 2.35
TRAPPC12-220ENST00000482645 RIMS1Q86UR5 1692 aaKnown RBP29.73■■■□□ 2.35
TRAPPC12-220ENST00000482645 KANK1Q14678 1352 aa29.72■■■□□ 2.35
TRAPPC12-220ENST00000482645 CLTCQ00610 1675 aaKnown RBP29.72■■■□□ 2.35
TRAPPC12-220ENST00000482645 UNC13BO14795 1591 aa29.72■■■□□ 2.35
TRAPPC12-220ENST00000482645 RAB3GAP2Q9H2M9 1393 aa29.72■■■□□ 2.35
TRAPPC12-220ENST00000482645 KDM5DQ9BY66 1539 aa29.71■■■□□ 2.35
TRAPPC12-220ENST00000482645 PLPPR3Q6T4P5 718 aa29.71■■■□□ 2.35
TRAPPC12-220ENST00000482645 TRIM52Q96A61 297 aa29.7■■■□□ 2.34
TRAPPC12-220ENST00000482645 PPP6R1Q9UPN7 881 aa29.69■■■□□ 2.34
TRAPPC12-220ENST00000482645 CEP152O94986 1710 aa29.69■■■□□ 2.34
TRAPPC12-220ENST00000482645 NUP155O75694 1391 aa29.68■■■□□ 2.34
TRAPPC12-220ENST00000482645 ABCC3O15438 1527 aa29.67■■■□□ 2.34
TRAPPC12-220ENST00000482645 CNTLNQ9NXG0 1405 aa29.65■■■□□ 2.34
TRAPPC12-220ENST00000482645 ZC3H13Q5T200 1668 aaKnown RBP29.64■■■□□ 2.34
TRAPPC12-220ENST00000482645 FAM135AQ9P2D6 1515 aa29.62■■■□□ 2.33
TRAPPC12-220ENST00000482645 VWDEQ8N2E2 1590 aa29.62■■■□□ 2.33
TRAPPC12-220ENST00000482645 PTPRMP28827 1452 aa29.6■■■□□ 2.33
TRAPPC12-220ENST00000482645 IQGAP3Q86VI3 1631 aa29.6■■■□□ 2.33
TRAPPC12-220ENST00000482645 CEBPAP49715 358 aaPredicted RBP29.6■■■□□ 2.33
TRAPPC12-220ENST00000482645 MROH2AA6NES4 1674 aa29.59■■■□□ 2.33
TRAPPC12-220ENST00000482645 ZMYM3Q14202 1370 aa29.59■■■□□ 2.33
TRAPPC12-220ENST00000482645 CAMSAP1Q5T5Y3 1602 aa29.59■■■□□ 2.33
TRAPPC12-220ENST00000482645 C3P01024 1663 aa29.57■■■□□ 2.32
TRAPPC12-220ENST00000482645 LMTK2Q8IWU2 1503 aa29.55■■■□□ 2.32
TRAPPC12-220ENST00000482645 TET3O43151 1660 aa29.53■■■□□ 2.32
TRAPPC12-220ENST00000482645 SLC4A1APQ9BWU0 796 aaKnown RBP29.52■■■□□ 2.32
TRAPPC12-220ENST00000482645 EFCAB6Q5THR3 1501 aa29.52■■■□□ 2.32
TRAPPC12-220ENST00000482645 PZPP20742 1482 aa29.51■■■□□ 2.31
TRAPPC12-220ENST00000482645 CFAP65Q6ZU64 1925 aaKnown RBP29.5■■■□□ 2.31
TRAPPC12-220ENST00000482645 ACIN1Q9UKV3 1341 aaKnown RBP29.49■■■□□ 2.31
TRAPPC12-220ENST00000482645 HRCP23327 699 aa29.49■■■□□ 2.31
TRAPPC12-220ENST00000482645 NPATQ14207 1427 aa29.48■■■□□ 2.31
TRAPPC12-220ENST00000482645 FBXO31Q5XUX0 539 aaPredicted RBP29.48■■■□□ 2.31
TRAPPC12-220ENST00000482645 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
TRAPPC12-220ENST00000482645 E9PCH4 1651 aa29.45■■■□□ 2.31
TRAPPC12-220ENST00000482645 ARHGAP31Q2M1Z3 1444 aa29.45■■■□□ 2.31
TRAPPC12-220ENST00000482645 PKD2Q13563 968 aa29.44■■■□□ 2.3
TRAPPC12-220ENST00000482645 PREX1Q8TCU6 1659 aa29.41■■■□□ 2.3
TRAPPC12-220ENST00000482645 FOXD1Q16676 465 aa29.4■■■□□ 2.3
TRAPPC12-220ENST00000482645 ERVK-7P63135 1459 aa29.4■■■□□ 2.3
TRAPPC12-220ENST00000482645 RPRD2Q5VT52 1461 aaKnown RBP29.39■■■□□ 2.3
TRAPPC12-220ENST00000482645 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
TRAPPC12-220ENST00000482645 TNRQ92752 1358 aa29.36■■■□□ 2.29
TRAPPC12-220ENST00000482645 SPATA31D1Q6ZQQ2 1576 aa29.35■■■□□ 2.29
TRAPPC12-220ENST00000482645 SPHKAPQ2M3C7 1700 aa29.3■■■□□ 2.28
TRAPPC12-220ENST00000482645 NOS1P29475 1434 aa29.3■■■□□ 2.28
TRAPPC12-220ENST00000482645 SYNMO15061 1565 aa29.3■■■□□ 2.28
TRAPPC12-220ENST00000482645 SETD1BQ9UPS6 1966 aaKnown RBP29.29■■■□□ 2.28
TRAPPC12-220ENST00000482645 MYO3AQ8NEV4 1616 aa29.28■■■□□ 2.28
TRAPPC12-220ENST00000482645 UHRF1BP1Q6BDS2 1440 aa29.26■■■□□ 2.27
TRAPPC12-220ENST00000482645 UGGT1Q9NYU2 1555 aa29.25■■■□□ 2.27
TRAPPC12-220ENST00000482645 PTPRTO14522 1441 aa29.23■■■□□ 2.27
TRAPPC12-220ENST00000482645 DHX57Q6P158 1386 aaKnown RBP29.23■■■□□ 2.27
TRAPPC12-220ENST00000482645 TRPM2O94759 1503 aa29.22■■■□□ 2.27
TRAPPC12-220ENST00000482645 PLA2R1Q13018 1463 aa29.21■■■□□ 2.27
TRAPPC12-220ENST00000482645 NLRP1Q9C000 1473 aa29.21■■■□□ 2.27
TRAPPC12-220ENST00000482645 IDI1Q13907 227 aa29.2■■■□□ 2.27
TRAPPC12-220ENST00000482645 CEP170BQ9Y4F5 1589 aaPredicted RBP29.19■■■□□ 2.26
TRAPPC12-220ENST00000482645 SLC52A1Q9NWF4 448 aa29.19■■■□□ 2.26
TRAPPC12-220ENST00000482645 PIK3C2BO00750 1634 aa29.17■■■□□ 2.26
TRAPPC12-220ENST00000482645 STAG3Q9UJ98 1225 aa29.17■■■□□ 2.26
TRAPPC12-220ENST00000482645 CLTCL1P53675 1640 aa29.17■■■□□ 2.26
TRAPPC12-220ENST00000482645 CHGAP10645 457 aaKnown RBP29.16■■■□□ 2.26
TRAPPC12-220ENST00000482645 A2ML1A8K2U0 1454 aa29.16■■■□□ 2.26
TRAPPC12-220ENST00000482645 ZNF142P52746 1687 aaPredicted RBP29.15■■■□□ 2.26
TRAPPC12-220ENST00000482645 LMTK3Q96Q04 1460 aa29.15■■■□□ 2.26
TRAPPC12-220ENST00000482645 CCDC144AA2RUR9 1427 aa29.15■■■□□ 2.26
TRAPPC12-220ENST00000482645 ANKRD30BQ9BXX2 1392 aa29.13■■■□□ 2.25
TRAPPC12-220ENST00000482645 CCER1Q8TC90 406 aaPredicted RBP29.12■■■□□ 2.25
TRAPPC12-220ENST00000482645 HSPA2P54652 639 aa29.1■■■□□ 2.25
TRAPPC12-220ENST00000482645 UBR1Q8IWV7 1749 aa29.09■■■□□ 2.25
TRAPPC12-220ENST00000482645 ADGRB3O60242 1522 aa29.09■■■□□ 2.25
TRAPPC12-220ENST00000482645 KIF1BO60333 1816 aa29.06■■■□□ 2.24
TRAPPC12-220ENST00000482645 MYO5BQ9ULV0 1848 aa29.06■■■□□ 2.24
TRAPPC12-220ENST00000482645 THEMISQ8N1K5 641 aaPredicted RBP29.05■■■□□ 2.24
TRAPPC12-220ENST00000482645 TMEM131LA2VDJ0 1609 aa29.05■■■□□ 2.24
TRAPPC12-220ENST00000482645 ZNF326Q5BKZ1 582 aaKnown RBP29.02■■■□□ 2.24
TRAPPC12-220ENST00000482645 KDM5AP29375 1690 aaKnown RBP29.01■■■□□ 2.24
TRAPPC12-220ENST00000482645 RGL3Q3MIN7 710 aa28.99■■■□□ 2.23
TRAPPC12-220ENST00000482645 SIN3AQ96ST3 1273 aa28.99■■■□□ 2.23
TRAPPC12-220ENST00000482645 NEUROD1Q13562 356 aa28.98■■■□□ 2.23
TRAPPC12-220ENST00000482645 TMEM2Q9UHN6 1383 aa28.95■■■□□ 2.22
TRAPPC12-220ENST00000482645 NUTM2DQ5VT03 806 aaPredicted RBP28.93■■■□□ 2.22
TRAPPC12-220ENST00000482645 SPATA31E1Q6ZUB1 1445 aa28.93■■■□□ 2.22
TRAPPC12-220ENST00000482645 RIMS2Q9UQ26 1411 aa28.91■■■□□ 2.22
TRAPPC12-220ENST00000482645 SLIT1O75093 1534 aa28.91■■■□□ 2.22
TRAPPC12-220ENST00000482645 EID1Q9Y6B2 187 aa28.9■■■□□ 2.22
TRAPPC12-220ENST00000482645 NCKAP5LQ9HCH0 1330 aa28.9■■■□□ 2.22
TRAPPC12-220ENST00000482645 TXNDC2Q86VQ3 553 aa28.89■■■□□ 2.22
TRAPPC12-220ENST00000482645 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 1595.9 ms