RNA–Protein interactions for RNA: ENST00000481639.1

PHC3-208, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-208ENST00000481639 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
PHC3-208ENST00000481639 STAC3Q96MF2 364 aa11.49□□□□□ -0.57
PHC3-208ENST00000481639 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
PHC3-208ENST00000481639 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
PHC3-208ENST00000481639 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
PHC3-208ENST00000481639 DDX12PQ92771 950 aa11.47□□□□□ -0.57
PHC3-208ENST00000481639 COL9A1P20849 921 aa11.46□□□□□ -0.57
PHC3-208ENST00000481639 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
PHC3-208ENST00000481639 HCSTQ9UBK5 93 aa11.43□□□□□ -0.58
PHC3-208ENST00000481639 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
PHC3-208ENST00000481639 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
PHC3-208ENST00000481639 NBR1Q14596 966 aa11.41□□□□□ -0.58
PHC3-208ENST00000481639 PROX2Q3B8N5 592 aa11.4□□□□□ -0.58
PHC3-208ENST00000481639 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
PHC3-208ENST00000481639 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
PHC3-208ENST00000481639 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
PHC3-208ENST00000481639 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
PHC3-208ENST00000481639 TSR1Q2NL82 804 aaKnown RBP11.36□□□□□ -0.59
PHC3-208ENST00000481639 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
PHC3-208ENST00000481639 MAP3K7O43318 606 aa11.35□□□□□ -0.59
PHC3-208ENST00000481639 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
PHC3-208ENST00000481639 GOLGA8CPA6NN73 597 aa11.34□□□□□ -0.59
PHC3-208ENST00000481639 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
PHC3-208ENST00000481639 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
PHC3-208ENST00000481639 ABCC9O60706 1549 aa11.34□□□□□ -0.59
PHC3-208ENST00000481639 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
PHC3-208ENST00000481639 WNT2BQ93097 391 aa11.33□□□□□ -0.6
PHC3-208ENST00000481639 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
PHC3-208ENST00000481639 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
PHC3-208ENST00000481639 OSBPP22059 807 aa11.32□□□□□ -0.6
PHC3-208ENST00000481639 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
PHC3-208ENST00000481639 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
PHC3-208ENST00000481639 PTPN5P54829 565 aa11.3□□□□□ -0.6
PHC3-208ENST00000481639 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
PHC3-208ENST00000481639 ZCCHC6Q5VYS8 1495 aaKnown RBP11.29□□□□□ -0.6
PHC3-208ENST00000481639 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
PHC3-208ENST00000481639 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
PHC3-208ENST00000481639 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
PHC3-208ENST00000481639 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
PHC3-208ENST00000481639 PRSS12P56730 875 aa11.24□□□□□ -0.61
PHC3-208ENST00000481639 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
PHC3-208ENST00000481639 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
PHC3-208ENST00000481639 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
PHC3-208ENST00000481639 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
PHC3-208ENST00000481639 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
PHC3-208ENST00000481639 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
PHC3-208ENST00000481639 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
PHC3-208ENST00000481639 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
PHC3-208ENST00000481639 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
PHC3-208ENST00000481639 BCAMP50895 628 aa11.2□□□□□ -0.62
PHC3-208ENST00000481639 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
PHC3-208ENST00000481639 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
PHC3-208ENST00000481639 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
PHC3-208ENST00000481639 C3orf80F5H4A9 247 aa11.15□□□□□ -0.62
PHC3-208ENST00000481639 SMAPO00193 183 aa11.15□□□□□ -0.62
PHC3-208ENST00000481639 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
PHC3-208ENST00000481639 TTC13Q8NBP0 860 aa11.14□□□□□ -0.63
PHC3-208ENST00000481639 TATDN2Q93075 761 aa11.14□□□□□ -0.63
PHC3-208ENST00000481639 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
PHC3-208ENST00000481639 NBPF26B4DH59 902 aa11.13□□□□□ -0.63
PHC3-208ENST00000481639 LRCH3Q96II8 777 aa11.13□□□□□ -0.63
PHC3-208ENST00000481639 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
PHC3-208ENST00000481639 SEMA3EO15041 775 aa11.12□□□□□ -0.63
PHC3-208ENST00000481639 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
PHC3-208ENST00000481639 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
PHC3-208ENST00000481639 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
PHC3-208ENST00000481639 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
PHC3-208ENST00000481639 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
PHC3-208ENST00000481639 TSR3Q9UJK0 312 aaKnown RBP11.11□□□□□ -0.63
PHC3-208ENST00000481639 NUDT18Q6ZVK8 323 aa11.1□□□□□ -0.63
PHC3-208ENST00000481639 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
PHC3-208ENST00000481639 PTGDRQ13258 359 aa11.08□□□□□ -0.64
PHC3-208ENST00000481639 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
PHC3-208ENST00000481639 KDM2AQ9Y2K7 1162 aa11.07□□□□□ -0.64
PHC3-208ENST00000481639 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
PHC3-208ENST00000481639 PPP4CP60510 307 aa11.04□□□□□ -0.64
PHC3-208ENST00000481639 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
PHC3-208ENST00000481639 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
PHC3-208ENST00000481639 EYA1Q99502 592 aa11.02□□□□□ -0.65
PHC3-208ENST00000481639 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
PHC3-208ENST00000481639 A0A0G2JS52 829 aa10.99□□□□□ -0.65
PHC3-208ENST00000481639 FCHSD2O94868 740 aa10.99□□□□□ -0.65
PHC3-208ENST00000481639 SWT1Q5T5J6 900 aaKnown RBP10.98□□□□□ -0.65
PHC3-208ENST00000481639 RBM26Q5T8P6 1007 aaKnown RBP10.98□□□□□ -0.65
PHC3-208ENST00000481639 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
PHC3-208ENST00000481639 MYO15BQ96JP2 1530 aa10.98□□□□□ -0.65
PHC3-208ENST00000481639 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
PHC3-208ENST00000481639 RNF40O75150 1001 aa10.96□□□□□ -0.65
PHC3-208ENST00000481639 KCNC4Q03721 635 aa10.96□□□□□ -0.65
PHC3-208ENST00000481639 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.65
PHC3-208ENST00000481639 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
PHC3-208ENST00000481639 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
PHC3-208ENST00000481639 RGS20O76081 388 aa10.93□□□□□ -0.66
PHC3-208ENST00000481639 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
PHC3-208ENST00000481639 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
PHC3-208ENST00000481639 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
PHC3-208ENST00000481639 DNAJB2P25686 324 aa10.91□□□□□ -0.66
PHC3-208ENST00000481639 APLP1P51693 650 aa10.91□□□□□ -0.66
PHC3-208ENST00000481639 HIC1Q14526 733 aa10.91□□□□□ -0.66
PHC3-208ENST00000481639 SLC4A3P48751 1232 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms