RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
COMMD4-203ENST00000480484 BCORL1Q5H9F3 1711 aa13.8□□□□□ -0.2
COMMD4-203ENST00000480484 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-203ENST00000480484 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
COMMD4-203ENST00000480484 DENND4BO75064 1496 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-203ENST00000480484 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.2
COMMD4-203ENST00000480484 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
COMMD4-203ENST00000480484 HSP90B1P14625 803 aaKnown RBP13.76□□□□□ -0.21
COMMD4-203ENST00000480484 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-203ENST00000480484 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
COMMD4-203ENST00000480484 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
COMMD4-203ENST00000480484 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-203ENST00000480484 PRG4Q92954 1404 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-203ENST00000480484 ERICH6BQ5W0A0 696 aa13.74□□□□□ -0.21
COMMD4-203ENST00000480484 GCC2Q8IWJ2 1684 aa13.74□□□□□ -0.21
COMMD4-203ENST00000480484 PLB1Q6P1J6 1458 aa13.73□□□□□ -0.21
COMMD4-203ENST00000480484 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-203ENST00000480484 MIA2Q96PC5 1412 aa13.72□□□□□ -0.21
COMMD4-203ENST00000480484 REREQ9P2R6 1566 aa13.71□□□□□ -0.22
COMMD4-203ENST00000480484 ABCC10Q5T3U5 1492 aa13.7□□□□□ -0.22
COMMD4-203ENST00000480484 PREX2Q70Z35 1606 aa13.7□□□□□ -0.22
COMMD4-203ENST00000480484 BRD2P25440 801 aaKnown RBP13.7□□□□□ -0.22
COMMD4-203ENST00000480484 PDE4CQ08493 712 aa13.7□□□□□ -0.22
COMMD4-203ENST00000480484 DAPK1P53355 1430 aa13.7□□□□□ -0.22
COMMD4-203ENST00000480484 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
COMMD4-203ENST00000480484 CCDC136Q96JN2 1154 aa13.69□□□□□ -0.22
COMMD4-203ENST00000480484 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
COMMD4-203ENST00000480484 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
COMMD4-203ENST00000480484 MYO5CQ9NQX4 1742 aa13.69□□□□□ -0.22
COMMD4-203ENST00000480484 ABCC5O15440 1437 aa13.69□□□□□ -0.22
COMMD4-203ENST00000480484 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
COMMD4-203ENST00000480484 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-203ENST00000480484 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
COMMD4-203ENST00000480484 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
COMMD4-203ENST00000480484 SKAP1Q86WV1 359 aa13.68□□□□□ -0.22
COMMD4-203ENST00000480484 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
COMMD4-203ENST00000480484 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
COMMD4-203ENST00000480484 ZMYM4Q5VZL5 1548 aa13.67□□□□□ -0.22
COMMD4-203ENST00000480484 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-203ENST00000480484 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-203ENST00000480484 RICTORQ6R327 1708 aa13.66□□□□□ -0.22
COMMD4-203ENST00000480484 KIF14Q15058 1648 aa13.66□□□□□ -0.22
COMMD4-203ENST00000480484 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
COMMD4-203ENST00000480484 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
COMMD4-203ENST00000480484 CDC42BPAQ5VT25 1732 aa13.66□□□□□ -0.22
COMMD4-203ENST00000480484 DNMT1P26358 1616 aaKnown RBP13.65□□□□□ -0.22
COMMD4-203ENST00000480484 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
COMMD4-203ENST00000480484 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-203ENST00000480484 CDC42BPBQ9Y5S2 1711 aa13.63□□□□□ -0.23
COMMD4-203ENST00000480484 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-203ENST00000480484 CROCC2H7BZ55 1655 aa13.63□□□□□ -0.23
COMMD4-203ENST00000480484 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
COMMD4-203ENST00000480484 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-203ENST00000480484 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
COMMD4-203ENST00000480484 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
COMMD4-203ENST00000480484 GPATCH8Q9UKJ3 1502 aaKnown RBP13.6□□□□□ -0.23
COMMD4-203ENST00000480484 FRMPD1Q5SYB0 1578 aa13.6□□□□□ -0.23
COMMD4-203ENST00000480484 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
COMMD4-203ENST00000480484 ROCK1Q13464 1354 aa13.6□□□□□ -0.23
COMMD4-203ENST00000480484 KCTD17Q8N5Z5 321 aa13.6□□□□□ -0.23
COMMD4-203ENST00000480484 FAM135AQ9P2D6 1515 aa13.6□□□□□ -0.23
COMMD4-203ENST00000480484 WDR7Q9Y4E6 1490 aa13.59□□□□□ -0.23
COMMD4-203ENST00000480484 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
COMMD4-203ENST00000480484 RAD21O60216 631 aa13.59□□□□□ -0.23
COMMD4-203ENST00000480484 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
COMMD4-203ENST00000480484 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
COMMD4-203ENST00000480484 ANKRD30BQ9BXX2 1392 aa13.59□□□□□ -0.23
COMMD4-203ENST00000480484 RGL2O15211 777 aa13.58□□□□□ -0.24
COMMD4-203ENST00000480484 KDM5CP41229 1560 aa13.58□□□□□ -0.24
COMMD4-203ENST00000480484 FOXD4L5Q5VV16 416 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-203ENST00000480484 FOXD4L4Q8WXT5 416 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-203ENST00000480484 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
COMMD4-203ENST00000480484 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
COMMD4-203ENST00000480484 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
COMMD4-203ENST00000480484 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
COMMD4-203ENST00000480484 MTMR7Q9Y216 660 aa13.55□□□□□ -0.24
COMMD4-203ENST00000480484 PZPP20742 1482 aa13.55□□□□□ -0.24
COMMD4-203ENST00000480484 NCOA1Q15788 1441 aa13.55□□□□□ -0.24
COMMD4-203ENST00000480484 ATP10BO94823 1461 aa13.55□□□□□ -0.24
COMMD4-203ENST00000480484 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
COMMD4-203ENST00000480484 RPRD2Q5VT52 1461 aaKnown RBP13.54□□□□□ -0.24
COMMD4-203ENST00000480484 NEFMP07197 916 aa13.54□□□□□ -0.24
COMMD4-203ENST00000480484 TEX14Q8IWB6 1497 aa13.54□□□□□ -0.24
COMMD4-203ENST00000480484 NEO1Q92859 1461 aa13.54□□□□□ -0.24
COMMD4-203ENST00000480484 CNTLNQ9NXG0 1405 aa13.53□□□□□ -0.24
COMMD4-203ENST00000480484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.53□□□□□ -0.24
COMMD4-203ENST00000480484 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
COMMD4-203ENST00000480484 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.24
COMMD4-203ENST00000480484 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.24
COMMD4-203ENST00000480484 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.24
COMMD4-203ENST00000480484 ECM2O94769 699 aaPredicted RBP13.52□□□□□ -0.24
COMMD4-203ENST00000480484 PTPRGP23470 1445 aa13.51□□□□□ -0.25
COMMD4-203ENST00000480484 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
COMMD4-203ENST00000480484 HNRNPMP52272 730 aaKnown RBP eCLIP13.49□□□□□ -0.25
COMMD4-203ENST00000480484 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-203ENST00000480484 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-203ENST00000480484 APBB1O00213 710 aa13.48□□□□□ -0.25
COMMD4-203ENST00000480484 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
COMMD4-203ENST00000480484 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
COMMD4-203ENST00000480484 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms