RNA–Protein interactions for RNA: ENST00000480292.5

MFSD1-213, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 1 (best)

Gene MFSD1, Length 2,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-213ENST00000480292 MAST1Q9Y2H9 1570 aa23.43■■□□□ 1.34
MFSD1-213ENST00000480292 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
MFSD1-213ENST00000480292 TTC37Q6PGP7 1564 aa23.43■■□□□ 1.34
MFSD1-213ENST00000480292 ST20-MTHFSA0A0A6YYL1 179 aa23.43■■□□□ 1.34
MFSD1-213ENST00000480292 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
MFSD1-213ENST00000480292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.4■■□□□ 1.34
MFSD1-213ENST00000480292 UNC13BO14795 1591 aa23.4■■□□□ 1.34
MFSD1-213ENST00000480292 SMG6Q86US8 1419 aaKnown RBP23.4■■□□□ 1.34
MFSD1-213ENST00000480292 CCDC144AA2RUR9 1427 aa23.37■■□□□ 1.33
MFSD1-213ENST00000480292 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
MFSD1-213ENST00000480292 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
MFSD1-213ENST00000480292 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
MFSD1-213ENST00000480292 PNISRQ8TF01 805 aaKnown RBP23.36■■□□□ 1.33
MFSD1-213ENST00000480292 E9PCH4 1651 aa23.36■■□□□ 1.33
MFSD1-213ENST00000480292 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
MFSD1-213ENST00000480292 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
MFSD1-213ENST00000480292 ZCCHC11Q5TAX3 1644 aaKnown RBP23.35■■□□□ 1.33
MFSD1-213ENST00000480292 PLXNC1O60486 1568 aa23.34■■□□□ 1.33
MFSD1-213ENST00000480292 TMC1Q8TDI8 760 aa23.34■■□□□ 1.33
MFSD1-213ENST00000480292 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
MFSD1-213ENST00000480292 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.33
MFSD1-213ENST00000480292 KTN1Q86UP2 1357 aaKnown RBP23.33■■□□□ 1.32
MFSD1-213ENST00000480292 IQGAP3Q86VI3 1631 aa23.32■■□□□ 1.32
MFSD1-213ENST00000480292 NUDCQ9Y266 331 aa23.32■■□□□ 1.32
MFSD1-213ENST00000480292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.32
MFSD1-213ENST00000480292 RALBP1Q15311 655 aa23.3■■□□□ 1.32
MFSD1-213ENST00000480292 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
MFSD1-213ENST00000480292 MYBBP1AQ9BQG0 1328 aaKnown RBP23.29■■□□□ 1.32
MFSD1-213ENST00000480292 BRD4O60885 1362 aaPredicted RBP23.28■■□□□ 1.32
MFSD1-213ENST00000480292 RGL3Q3MIN7 710 aa23.28■■□□□ 1.32
MFSD1-213ENST00000480292 A2MP01023 1474 aa23.28■■□□□ 1.32
MFSD1-213ENST00000480292 DUOX2Q9NRD8 1548 aa23.27■■□□□ 1.32
MFSD1-213ENST00000480292 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.32
MFSD1-213ENST00000480292 GPRASP1Q5JY77 1395 aa23.26■■□□□ 1.31
MFSD1-213ENST00000480292 RNF123Q5XPI4 1314 aa23.26■■□□□ 1.31
MFSD1-213ENST00000480292 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
MFSD1-213ENST00000480292 LAMC1P11047 1609 aa23.25■■□□□ 1.31
MFSD1-213ENST00000480292 FANCIQ9NVI1 1328 aa23.24■■□□□ 1.31
MFSD1-213ENST00000480292 MAGI2Q86UL8 1455 aa23.23■■□□□ 1.31
MFSD1-213ENST00000480292 PLCH2O75038 1416 aa23.22■■□□□ 1.31
MFSD1-213ENST00000480292 ERBINQ96RT1 1412 aa23.22■■□□□ 1.31
MFSD1-213ENST00000480292 ATP10AO60312 1499 aa23.22■■□□□ 1.31
MFSD1-213ENST00000480292 PRDM15P57071 1507 aaPredicted RBP23.21■■□□□ 1.31
MFSD1-213ENST00000480292 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
MFSD1-213ENST00000480292 MSH5O43196 834 aa23.19■■□□□ 1.3
MFSD1-213ENST00000480292 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
MFSD1-213ENST00000480292 PARD3Q8TEW0 1356 aa23.18■■□□□ 1.3
MFSD1-213ENST00000480292 EFCAB2Q5VUJ9 269 aa23.18■■□□□ 1.3
MFSD1-213ENST00000480292 COL17A1Q9UMD9 1497 aaPredicted RBP23.18■■□□□ 1.3
MFSD1-213ENST00000480292 PER1O15534 1290 aaPredicted RBP23.16■■□□□ 1.3
MFSD1-213ENST00000480292 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
MFSD1-213ENST00000480292 TESK2Q96S53 571 aa23.16■■□□□ 1.3
MFSD1-213ENST00000480292 ABCC1P33527 1531 aa23.15■■□□□ 1.3
MFSD1-213ENST00000480292 DISP3Q9P2K9 1392 aa23.13■■□□□ 1.29
MFSD1-213ENST00000480292 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
MFSD1-213ENST00000480292 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
MFSD1-213ENST00000480292 WASHC2CQ9Y4E1 1318 aa23.11■■□□□ 1.29
MFSD1-213ENST00000480292 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
MFSD1-213ENST00000480292 CCDC136Q96JN2 1154 aa23.08■■□□□ 1.28
MFSD1-213ENST00000480292 TMF1P82094 1093 aa23.07■■□□□ 1.28
MFSD1-213ENST00000480292 PANK3Q9H999 370 aa23.06■■□□□ 1.28
MFSD1-213ENST00000480292 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
MFSD1-213ENST00000480292 SPAG9O60271 1321 aaKnown RBP23.04■■□□□ 1.28
MFSD1-213ENST00000480292 RTEL1-TNFRSF6BF6WH68 1400 aa23.04■■□□□ 1.28
MFSD1-213ENST00000480292 ASXL2Q76L83 1435 aa23.03■■□□□ 1.28
MFSD1-213ENST00000480292 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
MFSD1-213ENST00000480292 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
MFSD1-213ENST00000480292 MADDQ8WXG6 1647 aa23.02■■□□□ 1.28
MFSD1-213ENST00000480292 PDE3BQ13370 1112 aa23.02■■□□□ 1.28
MFSD1-213ENST00000480292 TRPM2O94759 1503 aa23.01■■□□□ 1.27
MFSD1-213ENST00000480292 ZFYVE16Q7Z3T8 1539 aa23.01■■□□□ 1.27
MFSD1-213ENST00000480292 AFAP1Q8N556 730 aa23■■□□□ 1.27
MFSD1-213ENST00000480292 CEP152O94986 1710 aa23■■□□□ 1.27
MFSD1-213ENST00000480292 INSRP06213 1382 aa23■■□□□ 1.27
MFSD1-213ENST00000480292 IQGAP1P46940 1657 aa22.99■■□□□ 1.27
MFSD1-213ENST00000480292 RRP1P56182 461 aaKnown RBP22.99■■□□□ 1.27
MFSD1-213ENST00000480292 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
MFSD1-213ENST00000480292 SALL2Q9Y467 1007 aaPredicted RBP22.99■■□□□ 1.27
MFSD1-213ENST00000480292 ABCA9Q8IUA7 1624 aa22.99■■□□□ 1.27
MFSD1-213ENST00000480292 DEPDC5O75140 1603 aa22.98■■□□□ 1.27
MFSD1-213ENST00000480292 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
MFSD1-213ENST00000480292 ZMYM4Q5VZL5 1548 aa22.98■■□□□ 1.27
MFSD1-213ENST00000480292 PTPRTO14522 1441 aa22.97■■□□□ 1.27
MFSD1-213ENST00000480292 BLMP54132 1417 aaPredicted RBP22.96■■□□□ 1.27
MFSD1-213ENST00000480292 ERICH6Q7L0X2 663 aa22.95■■□□□ 1.26
MFSD1-213ENST00000480292 CLTCL1P53675 1640 aa22.95■■□□□ 1.26
MFSD1-213ENST00000480292 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
MFSD1-213ENST00000480292 TET3O43151 1660 aa22.94■■□□□ 1.26
MFSD1-213ENST00000480292 FANCAO15360 1455 aa22.92■■□□□ 1.26
MFSD1-213ENST00000480292 SCAPERQ9BY12 1400 aa22.92■■□□□ 1.26
MFSD1-213ENST00000480292 INO80Q9ULG1 1556 aaPredicted RBP22.91■■□□□ 1.26
MFSD1-213ENST00000480292 ATP7AQ04656 1500 aa22.91■■□□□ 1.26
MFSD1-213ENST00000480292 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
MFSD1-213ENST00000480292 CDCA7LQ96GN5 454 aa22.9■■□□□ 1.26
MFSD1-213ENST00000480292 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.26
MFSD1-213ENST00000480292 EXOC6Q8TAG9 804 aa22.89■■□□□ 1.26
MFSD1-213ENST00000480292 KANK1Q14678 1352 aa22.89■■□□□ 1.25
MFSD1-213ENST00000480292 CDCA8Q53HL2 280 aa22.87■■□□□ 1.25
MFSD1-213ENST00000480292 KNSTRNQ9Y448 316 aa22.87■■□□□ 1.25
MFSD1-213ENST00000480292 SYNMO15061 1565 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms